Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
1 3 3
2 3 3
3 3 3
4 3 3
4 12 12

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 53 67
Multiple Base Substitutions 0 0
Deletions 5 7
Insertions 12 14
Mobile Element Insertions 0 0
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 70 88

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F0 I1 R1 3 0 123.2 6165484 93.7% 5777058 132.5
A1 F11 I1 R1 11 0 788.4 37250750 92.1% 34307940 143.1
A1 F37 I1 R1 15 0 134.5 6416132 89.7% 5755270 132.7
A2 F10 I1 R1 11 0 16.8 770476 94.0% 724247 144.2
A2 F35 I1 R1 15 0 22.5 1172340 88.9% 1042210 132.9
A2 F72 I1 R1 15 0 251.2 10896892 96.5% 10515500 148.3
A3 F14 I1 R1 12 0 347.9 16462144 93.7% 15425028 140.4
A3 F39 I1 R1 16 0 43.9 2012446 89.9% 1809188 133.1
A3 F76 I1 R1 16 0 354.5 15212414 95.9% 14588705 149.0
A4 F11 I1 R1 11 0 342.9 16076890 93.9% 15096199 141.4
A4 F36 I1 R1 14 0 35.7 1674236 89.9% 1505138 133.2
A4 F56 I1 R1 51 0 59.6 2747906 89.7% 2464871 132.9

Mutation Needle Plot

Mutation Targets

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