Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
4 2 3
5 2 3
6 2 3
7 2 3
8 2 3
9 2 3
7 13 19

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 30 42
Multiple Base Substitutions 0 0
Deletions 1 1
Insertions 4 6
Mobile Element Insertions 1 1
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 36 50

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I0 R1 91 0 99.9 3430394 98.4% 3375507 138.0
A4 F23 I1 R1 1 0 111.8 3917304 98.4% 3854627 135.5
A4 F69 I0 R1 142 0 113.0 4248520 96.3% 4091324 135.6
A4 F69 I1 R1 1 0 102.3 3957632 86.9% 3439182 138.7
A5 F22 I1 R1 1 0 91.7 3230112 98.4% 3178430 134.5
A5 F67 I0 R1 253 0 76.5 2897616 95.8% 2775916 135.1
A5 F67 I1 R1 2 0 79.8 2954936 92.8% 2742180 134.9
A6 F23 I1 R1 1 0 128.4 4471334 98.5% 4404263 136.0
A6 F68 I0 R1 301 0 54.1 2003606 96.0% 1923461 135.6
A6 F68 I1 R1 3 0 79.7 2941112 90.6% 2664647 139.2
A7 F22 I1 R1 1 0 114.3 3996730 98.7% 3944772 135.0
A7 F68 I0 R1 360 0 76.3 2813080 96.4% 2711809 135.7
A7 F68 I1 R1 2 0 110.4 4172296 91.1% 3800961 135.4
A8 F23 I1 R1 2 0 137.0 4791798 98.8% 4734296 135.4
A8 F68 I0 R1 412 0 52.0 1996146 94.7% 1890350 135.1
A8 F68 I1 R1 2 0 109.0 4284470 87.1% 3731773 136.3
A9 F22 I1 R1 1 0 100.7 3522602 98.6% 3473285 135.1
A9 F66 I0 R1 145 0 110.0 4069116 96.4% 3922627 135.5
A9 F66 I1 R1 3 0 117.9 4560468 89.4% 4077058 134.9

Mutation Needle Plot

Mutation Targets

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