Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
1 3 3
2 1 1
3 2 2
4 2 2
5 2 2
6 2 2
6 12 12

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 17 30
Multiple Base Substitutions 0 0
Deletions 10 48
Insertions 7 29
Mobile Element Insertions 5 5
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 39 112

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F58 I1 R1 7 0 187.5 3872321 94.7% 3667087 237.7
A1 F133 I1 R1 8 0 77.8 1665675 96.6% 1609042 225.9
A1 F134 I1 R1 17 0 223.7 4650740 96.5% 4487964 225.5
A2 F58 I1 R1 8 0 138.6 2901453 94.2% 2733168 234.0
A3 F57 I1 R1 8 0 149.3 3168033 92.5% 2930430 235.1
A3 F133 I1 R1 8 0 228.9 4911662 95.3% 4680813 224.7
A4 F59 I1 R1 8 0 174.3 3614805 95.1% 3437679 233.7
A4 F135 I1 R1 10 0 172.9 3838759 95.1% 3650659 216.0
A5 F54 I1 R1 7 0 102.2 2130574 92.3% 1966519 237.7
A5 F135 I1 R1 9 0 249.2 5114451 96.1% 4914987 230.2
A6 F58 I1 R1 8 0 104.0 2222166 92.1% 2046614 236.4
A6 F133 I1 R1 14 0 151.8 3066412 96.5% 2959087 232.6

Mutation Needle Plot

Mutation Targets

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