Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
1 8 8
2 9 9

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 212 1281
Multiple Base Substitutions 1 9
Deletions 10 64
Insertions 13 59
Mobile Element Insertions 6 14
Amplifications 50 61
Gene Conversions 0 0
Inversions 0 0
Total 292 1488

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 87 0 137.1 4388942 98.8% 4336274 149.1
A1 F16 I0 R1 235 0 70.4 2387208 96.6% 2306042 149.2
A1 F17 I0 R1 232 0 78.7 2929926 95.1% 2786359 149.2
A1 F22 I0 R1 242 0 58.1 1984614 97.7% 1938967 148.9
A1 F23 I0 R1 242 0 59.5 2139548 97.5% 2086059 149.3
A1 F25 I0 R1 244 0 64.6 2208384 98.0% 2164216 149.0
A1 F30 I0 R1 243 0 58.7 2081044 97.5% 2029017 149.3
A1 F41 I0 R1 212 0 10.4 395026 92.3% 364608 148.9
A1 F66 I1 R1 87 0 135.3 4842990 98.9% 4789717 149.1

Mutation Needle Plot

Mutation Targets

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