ALE, flask, and isolate counts
| ALE replicate |
Flask count |
Isolate count |
| 1 |
1 |
1 |
| 2 |
1 |
1 |
| 3 |
1 |
1 |
| 4 |
1 |
1 |
| 5 |
1 |
1 |
| 6 |
1 |
1 |
| 6 |
6 |
6 |
ALE experiment mutation counts
| Mutation Type |
Unique |
Observed |
| Single Base Substitutions |
76 |
93 |
| Multiple Base Substitutions |
0 |
0 |
| Deletions |
4 |
19 |
| Insertions |
6 |
11 |
| Mobile Element Insertions |
0 |
0 |
| Amplifications |
0 |
0 |
| Gene Conversions |
0 |
0 |
| Inversions |
0 |
0 |
| Total |
86 |
123 |
Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Unassigned Missing Coverage Evidence |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
12 |
0 |
222.5 |
1901056 |
98.3% |
1868738 |
227.9 |
|
A2 F1 I1 R1
|
12 |
0 |
292.2 |
2443606 |
98.0% |
2394733 |
225.9 |
|
A3 F1 I1 R1
|
9 |
0 |
312.1 |
2965838 |
98.0% |
2906521 |
225.7 |
|
A4 F1 I1 R1
|
12 |
0 |
338.8 |
2932346 |
96.2% |
2820916 |
225.7 |
|
A5 F1 I1 R1
|
13 |
0 |
324.3 |
2800886 |
95.5% |
2674846 |
229.8 |
|
A6 F1 I1 R1
|
65 |
0 |
266.8 |
2672614 |
96.8% |
2587090 |
204.9 |
Mutation Needle Plot
