| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 549,106 | T→A | 6.3% | S40T (TCC→ACC) | EO946_RS02865 → | PLP‑dependent aminotransferase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 549,106 | 0 | T | A | 6.3% | 706.1 / 6.1 | 262 | S40T (TCC→ACC) | EO946_RS02865 | PLP‑dependent aminotransferase family protein |
| Reads supporting (aligned to +/- strand): ref base T (146/88); new base A (3/14); total (151/111) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.56e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 265 total aligned reads displayed.
AGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTG > NZ_CP034943/548970‑549244 | gTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCaa < 1:1875978/140‑1 (MQ=255) tAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCaaaa < 1:2531313/140‑1 (MQ=255) aGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAg > 2:1250289/1‑140 (MQ=255) aGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGAAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTGCAAAAg > 1:2822607/1‑140 (MQ=255) ggAGAACAACCCAAATGGATATCACGCCTTTATTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGATATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGa < 2:888735/140‑1 (MQ=255) gagaACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGAc > 2:285306/1‑140 (MQ=255) aacaacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTcc > 1:3485565/1‑140 (MQ=255) aacaacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTACCAAAAGACTcc > 1:2093801/1‑140 (MQ=255) acaacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCt < 2:172145/140‑1 (MQ=255) aacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTgg < 1:3903368/140‑1 (MQ=255) cccAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCg > 2:2700869/1‑140 (MQ=255) cAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGACTGAAGCTCCCTGCCAAAAGACTCCTGGCGAg > 2:3854180/1‑140 (MQ=255) aaTGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTc < 1:3627051/140‑1 (MQ=255) aTGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGACAACATGCATCAGGGGCGTCTTCAAATAGGAATGAAGCGCCCTTCCAAACGACTCCTGGCGAGTCa > 2:2383398/1‑140 (MQ=255) aTGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCa > 1:1087034/1‑140 (MQ=255) tatCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCGCTTCCAAAAGACTCCTGGCGAGTCAGCttt > 1:4174033/1‑140 (MQ=255) tatCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCttt > 2:2111358/1‑140 (MQ=255) tatCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCttt > 1:4263256/1‑140 (MQ=255) tatCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCttt > 1:884836/1‑140 (MQ=255) tatCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCttt > 2:142077/1‑140 (MQ=255) tatCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCttt > 2:1497930/1‑140 (MQ=255) tatCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCttt > 2:2660268/1‑140 (MQ=255) tatCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCttt > 2:859908/1‑140 (MQ=255) atCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTCTGCAAAAAGGAATGAAGCTCCCTGCCAAAAGACTCCTGGCGAGTCAGCTTTc > 2:2362822/1‑140 (MQ=255) atCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTc > 2:817109/1‑140 (MQ=255) cccGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGATATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCa < 2:1749806/138‑1 (MQ=255) cccGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTGATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCa < 2:3802327/138‑1 (MQ=255) cACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCCGCTTTCCa > 2:4168710/1‑140 (MQ=255) cACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCa > 2:272812/1‑140 (MQ=255) cACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCa < 2:4061351/140‑1 (MQ=255) cGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATc < 2:1202091/140‑1 (MQ=255) gCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCa < 1:2353939/140‑1 (MQ=255) cTTTTTTGAATATAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAATGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGt < 2:2574007/140‑1 (MQ=255) cTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGt > 1:2694106/1‑140 (MQ=255) cTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGt > 1:1008956/1‑140 (MQ=255) cTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGt > 1:4049235/1‑140 (MQ=255) tttttGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCa > 1:1781409/1‑140 (MQ=255) tttaaTATAAATCTGTATTTTCCGATTTATCAGAAGCTTTATCGCTATTTCAAATAAAACATGCATCTGGGGCTTATTCAAAATGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGATTCAGCTTTCCATCAGTCacac < 2:2052210/137‑1 (MQ=255) ttGAATAGAAATCTGTATTTGCCGCTTTACCAGCAGCTTAAGCGCTATTTCAAACAAACCATGAATCAGGGGCTTATTCAAAAAGGAATGAAGCACCCTTCCAACAGACTCCTCGCGAGTCAGCTTTCCATCAGtaacac < 2:4121651/140‑6 (MQ=255) tAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTg > 1:3538012/1‑140 (MQ=255) cgggATATTCCGGTTTATCACCAGCTTTATCGCTATTTCAAACAAAACATGCACCCGGGGCGTATTAAAAACGCAATGAAGCTCCCTTCCAACCGACTCCTGGCGAGTCAGGTTTCCATCTGTCACACGACTGTAGAACg < 1:3583968/138‑1 (MQ=255) cTGTATATTCCGCTGTACCCGCAGCTTTATCGCTATTTCAAAGAAAACATGAAGCCGGGGCGTATTAAAAAAGCAATCACGCGCCCGTCCAAACGACGCCTGGCGAGTCAGCTTTCCATCAGTCACACGACTGTAGAACg < 1:192143/140‑1 (MQ=255) cTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAACAAAACATGCATCCGGGGCGTATTCAAAACGGAATGACGCACCCTTCCAAACCACGCCGGGCGAGTAAGGTTTCCATCAGTCAAACGACTGTAGAACg < 1:4014748/140‑1 (MQ=255) cTGGATATTCCGCTTTAACAGCAGCTTTATCGCTATTTAAAACAAAACATGCATCAGGGGCTTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGCCGAGTCAGCTTTCCATCAGTCACACGACTGTAGAACg < 2:3096703/140‑1 (MQ=255) ggATTTTCCGATTAATCAGCAGCTTTATCGGTATTACAAATAAAACATGATTCAGGGGCGTATTAAAAAAGGAATGAAGCTCCCTACCAAAAGACTCCTGGGGAGTCAGATTACCATCAGTCAAACGACTGTAGAACGTg < 2:2554833/140‑1 (MQ=255) gATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGc > 2:163564/1‑140 (MQ=255) tCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGt > 2:58370/1‑100 (MQ=255) tCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATg > 2:178222/1‑140 (MQ=255) tCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATg > 2:1889357/1‑140 (MQ=255) ctcTTTATCAGCAGATTTATCGATATTTCAAAAAAAACATGCAACCGGGGCTTATTAAAAACGCAATCAAGCTCCCTTCCAAAAGACTCCTGGCGATACAGCTTTCCATCAGTCACACGACTGTAGAACGTGCCTATGaa < 1:2666469/138‑1 (MQ=255) cGCTTTATCCGCAGCTTTATCGATATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAACGGAATCAAGCTCCCTTCAAAAAGACCCCTGGCGCTTCAGCTTTCCATCAGCCAAACGACTGTAGAACGTGCCTATGaa < 1:57369/140‑1 (MQ=255) cGCTTTATCAGCAGTTTTTTCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCGCCCTTCCAAACGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGaa < 2:533502/140‑1 (MQ=255) cGCTTTATCAGCAGCTTTATCGATATTAAAAATAAAAAATGCATCAGGGGCTTATTAAAAAAGGAATGAAGCTCCCTTCCAAAACACTCCGGGCGAGTCAGCTTTCCAACAGTCAAACGACTGTAGAACGTGCCTATGaa < 2:1437429/140‑1 (MQ=255) cGCTTTACCAGCAGCTTTATCGCTATTACAAACAAAACATGAATCCGGGGCTTATAAAAAAAGCAATGACGCGCCCTACCAAACCACGCCGGGCGAGTCAGCTTTCCACCCGCCACACGACTGTAGAACGTGCCTATGaa < 1:1250289/140‑1 (MQ=255) tttATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAg > 1:2049561/1‑140 (MQ=255) tATCACCACCTTTATCCATATTTAAAAGAAAACATCCAACAGGGGGTTATACAAAATGCAATTAAGCTACCTTCAAAAAGACTCCTGGCGTTTCAGGTTTCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCt < 2:2746958/140‑1 (MQ=255) tCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCCGGGGCGTATACAAAACGCAATGACGCGCCCTTCCAAAACACCCCCGGCGAGTCAGCTTTCCAACAGACAAACGACTGTAGAACGTGCCTATGAACAGCTtg < 1:666670/140‑1 (MQ=255) acagcagATTTATCGCTATTTCAAACAAAACATGCATCCGGGGCGTATTCAAAAAGTAATTAAGCTCCCTTCAAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGACACACGACTGTAGAACGTGCCTATGAACAGCTtg < 1:1982887/139‑1 (MQ=255) cgcTTTACCGATTTTCCAACAAAAACAGCCATCCGGGGCGTTTTAAAAACGCATTGACGCCCCCTACCAAACCCCCCCGGGCGAGTCAGCTTCCCCTCACACACACGACTGTAGAACGTGCCTAGGAACAGCTTgctgct < 1:3419210/139‑1 (MQ=255) agcTTTATCGCTTTTTCAAACAAAACCTGCATCCGGGGCGTATAAAAAACGCAATGAAGCGCCCTCCCAAACGCCGCCGGGCGAGTCACCTTGCCACCCGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:3265407/140‑1 (MQ=255) agcTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct > 1:2271405/1‑140 (MQ=255) agcTTTATCGATATTTCAAATAAAACCTGCAACCGGGGCGTTTTAAAAAAGCAATGACGCCCCCTTCCAAAACACGCCGGGCGAGTCAGCTTTCCACCACCCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:1445163/140‑1 (MQ=255) agcTTGATCGCTATTAAAAACAAAACACCCAGCCGGGGGGTTTACAACACCGAATCAACCGCCAGTCCAACACACCCCGGCCGAGTAAGCTTCCCACCAGCCCCACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:2225629/140‑1 (MQ=255) gcTTTATCGCTATTTCAAAGAAAACAGGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAACGACGCCTGGCGAGTCAGCTTTCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGctgctg < 2:2509003/140‑1 (MQ=255) gatttATCGATATTTCAAATAAAACATGAATAAGGGGCGTATTAAAAAAGTAATTAAGCTCCTTTCCAAAAGACACCGGGCGAGTAAGGTTTCCAGCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGctgctg < 2:3326803/138‑1 (MQ=255) cTTTCTCGCTATTTCAAAGAAACCATCCATCCGGGGCGTATTAAAAAAGGAAGGAAGCGCCCTTCCAAAACACCCCTGGCGAGTCTGCTTTCCACCAGCCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:2917775/140‑1 (MQ=255) cTTTATCGCTTTTACAAAGAAAAAATCAAACAGGGGCTTATTAAAAAAGTAATGAAGCTCCATACCAAAAGACACCTGGCGAGTCAGCTTTCCATCCGCCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:3165661/140‑1 (MQ=255) cTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAACGACTCCGGGCGAGTAAGCTTTCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:1343835/140‑1 (MQ=255) cTTTAACCCTATTACAAACAAAACATCAATCCGGGGCTAATTCAAAAAGTAATTAAGCCCCCTTCCAAAACACTCCTGGCGAGTCACCTTACCATAATTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:1570414/140‑1 (MQ=255) tATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAggg > 1:3029413/1‑140 (MQ=255) tATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAggg > 1:3842471/1‑140 (MQ=255) tATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAggg > 1:1510951/1‑140 (MQ=255) aTTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATc > 2:1033501/1‑140 (MQ=255) aacaaaaCATGCATCAGGGGCGTATTCAAAAAGTAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGc < 1:1896431/137‑1 (MQ=255) aaCATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGcc > 1:1327939/1‑140 (MQ=255) aTGCATCAGGGGCGTATTAAAAAAGGAATGAAGCTCCCTTCAAAAAGACTCCTGGCGAGTCAGCTGTCCAACCGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCaag < 1:2111358/140‑1 (MQ=255) tCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTCTGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCg > 2:1994823/1‑140 (MQ=255) ccggggCGTATACAAAACGTAATGAAGCGCCCTTCCAACCCCCTCCTGGCGAGTCTGCTTTCCAACAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCgg < 1:509378/138‑1 (MQ=255) aGGGGCGTCTTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGa > 2:1712136/1‑140 (MQ=255) aGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGa > 2:281010/1‑140 (MQ=255) ggggCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGAt > 2:18781/1‑140 (MQ=255) gcttATTAAAAACGGAATGAAGCTCCCTCCAAAACCACGCCGGGCGAGTAAGCTTTCAACCCTTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGt < 1:1404748/137‑1 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGtgtg > 1:2518570/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:1624976/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 2:984609/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 2:3912042/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:2970108/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:3736133/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:998199/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 2:2179701/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAAAGTGCCTATGAACAGCTTGCTGCGGAGGGCTATCTCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 2:2973667/1‑140 (MQ=255) ttaaaaatGGAATGACGCTCCCTTCCAAAAGACTCCTGGCGAGTAAGGTTTCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCt < 2:2271405/137‑1 (MQ=255) ttCAAAAAGGAATGACGCGCCCTTCCAAACGACTCCTGGCGAGTCTGCTTTCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCt < 2:2453084/140‑1 (MQ=255) ttCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCt > 2:2735112/1‑140 (MQ=255) aaaaaGTAATTACGCTCCCTTACTACTGTCTCCTTGCTAGTCATCTTTCCATAAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGAt < 2:3596413/140‑1 (MQ=255) aaaaaGTAATGAAGCTCCCTTCCAAACCACTCCTGGCGAGTCAGCTTTCCATCAGTAACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGAt < 2:1087034/140‑1 (MQ=255) aGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATc > 1:1750366/1‑140 (MQ=255) cTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGa > 2:1646283/1‑140 (MQ=255) cccTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCACGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGagt > 2:3412093/1‑138 (MQ=255) attCAAAAAGAATCCTGGGGTGTCAGCTTTCCATAAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGAtttt < 1:4112664/139‑1 (MQ=255) | AGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTG > NZ_CP034943/548970‑549244 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |