BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NZ_CP034943	607,413	A→C	9.4%	T86P (ACC→CCC)	EO946_RS03185 →	collagen‑like protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP034943	607,413	0	A	C	9.4%	359.8 / 2.7	184	T86P (ACC→CCC)	EO946_RS03185	collagen‑like protein
Reads supporting (aligned to +/- strand): ref base A (52/101); new base C (2/24); total (56/128)
Fisher's exact test for biased strand distribution p-value = 5.38e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 190 total aligned reads displayed.

AGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAG  >  NZ_CP034943/607274‑607548

cgCCACGGGAGCGACCGGGGAAGCTGGCCCAGCCGGCGCGACGGGAGCGACAGGAGCTACCGGGGAACCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCaa                                                                                                                                         <  1:2798731/139‑1 (MQ=255)

cgCCACGGGAGCGACCGGGGAAGCGGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCaa                                                                                                                                         <  1:3923889/139‑1 (MQ=255)

aGCCCCGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGCCCAGCCGGACCACCCGGCGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCaa                                                                                                                                         <  1:2673742/140‑1 (MQ=255)

aGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCaa                                                                                                                                         <  1:1266285/140‑1 (MQ=255)

 gCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAAc                                                                                                                                        >  1:4234255/1‑140 (MQ=255)

    aCGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCgg                                                                                                                                     <  1:2181815/140‑1 (MQ=255)

         aGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGAGCAGCCGGACCAACCggagcga                                                                                                                                >  2:49646/1‑140 (MQ=255)

         aGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcga                                                                                                                                >  2:3603357/1‑140 (MQ=255)

         aGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcga                                                                                                                                >  2:1127843/1‑140 (MQ=255)

          gCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgac                                                                                                                               <  1:2888089/140‑1 (MQ=255)

           cTACCGGGGAAGCTGGACCAGCCGGAGCGCCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgaca                                                                                                                              <  2:4102741/140‑1 (MQ=255)

           cTACCGGCGAAGCAGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCggagcgaca                                                                                                                              <  2:1713464/140‑1 (MQ=255)

                      gCTGGACCAGCCGGAGCGACGGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCAACCGGAGCGACGGGGGCGACGGGAGCTACCGGGGCAGCCGGAGCCGCCGGGGCGGCCggagcgacgggggcggccgg                                                                                                                   >  2:457714/1‑135 (MQ=11)

                      gCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGagcgacaggagcgacagg                                                                                                                   >  1:1055229/1‑140 (MQ=255)

                      gCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGagcgacaggagcgacagg                                                                                                                   <  2:3843678/140‑1 (MQ=255)

                      gCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGTGAATCCGGACCAGCCGCAACAACCagagctccaggagcgactcg                                                                                                                   >  1:2908166/1‑137 (MQ=17)

                      gCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGagcgacaggagcgacagg                                                                                                                   <  1:1778754/140‑1 (MQ=255)

                      gCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGagcgacaggagcgacagg                                                                                                                   <  1:3984509/140‑1 (MQ=255)

                        tGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAAc                                                                                                                                        >  1:3839138/1‑117 (MQ=255)

                        cggACCAGCCGGCGCGACGGGAGCGACAGGAGCGACCGGGGCAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGcgacaggagcgacaggag                                                                                                                 <  2:186640/139‑1 (MQ=255)

                        cggACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGcgacaggagcgacaggag                                                                                                                 <  1:1680098/139‑1 (MQ=255)

                        cggACCAGCCGGAGCCACCGGCGCCACCGGAGCGACCGGGGCAGCCGGACCACCCGTACGTACCGGAGCGACGGGAGCCACGGGATAGACCTGGTAAGTCGGACCAGGCGGACCAACCGGAGactcaggagcgacaggag                                                                                                                 <  2:1459919/139‑1 (MQ=12)

                        aggACCAGCCGGACCGCCGGGAGCGACAGGAGCCACCGGGGCAGCCGGACCACCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGCAGCCGGACCAGCCGGACCAACCGGAGcgacaggagcgacaggag                                                                                                                 <  2:1327057/139‑1 (MQ=17)

                           cccAGCGGGAGCGCCGGGCGCGACCGGAGCTACCGGGGACGCCGGTCCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTa                                                                                                              <  2:2513895/139‑1 (MQ=17)

                           aCCAGCCGGAGCGACGGGAGCGACCGGAGCTACCGGGGATGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTa                                                                                                              <  2:2211271/140‑1 (MQ=255)

                           aCCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCTCCCGGAGCGACCGGAGCGCCAGGAGCtc                                                                                                              >  2:3347794/1‑139 (MQ=255)

                           aCCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTa                                                                                                              >  2:2270298/1‑140 (MQ=255)

                           aCCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACCGGAGCCACGGGAGCGACCGGGGAAGCGGGAGCAGCCGGACCAACCGGAGCgcccggagcgaccggagcga                                                                                                              >  2:571296/1‑138 (MQ=17)

                           aCCAGCCGGAGCGACGGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTa                                                                                                              <  2:3942790/140‑1 (MQ=255)

                               gCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCgg                                                                                                          >  1:2757415/1‑140 (MQ=255)

                               gCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCgg                                                                                                          <  2:2111986/140‑1 (MQ=255)

                                ccGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCAACCGGAGCGACCGGAGCCCCCGGCGCTCCCGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCGACCGGGGCCGCCGGACCGACCggg                                                                                                         >  2:3426350/1‑140 (MQ=11)

                                ccGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCCACCGGAGCGACCGGAGCCACGGGCGCTCCCGGGGACGCCGGACCAGCCGGACCAACCGGACGGTGCGGAGCGAGAGGAGCT‑CCgggg                                                                                                        >  2:4032507/1‑140 (MQ=14)

                                ccGGAGCGACGGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCggg                                                                                                         <  2:1045448/140‑1 (MQ=255)

                                    cgCGACGGGTGGGTCTGGAGCTCCCGGGGACCCGGGCCCAGCCGGACCACCCGGAGCGCCGGGAGCCACGGGAGCTACCGGGGATGCCGGACCAGCCGGACCACCCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAg                                                                                                     <  1:1866179/139‑1 (MQ=14)

                                          gggCGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGGGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                                                                               <  1:472833/140‑1 (MQ=255)

                                          gggAGCTACAGGAGCTACCGGGGATGCCGGACCAGCCGGACCAACCGGAGCGACTGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACTGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                                                                               <  1:1086627/140‑1 (MQ=255)

                                          gggAGCGACCGGAGCGACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACGGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                                                                               <  1:481895/140‑1 (MQ=255)

                                          gggAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcga                                                                                                                                >  1:2959445/1‑107 (MQ=255)

                                                 aCAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                                                                                        >  1:2267394/1‑140 (MQ=255)

                                                 aCAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                                                                                        <  2:2757415/140‑1 (MQ=255)

                                                   aGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggag                                                                                      <  2:2514382/140‑1 (MQ=255)

                                                     gAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcg                                                                                    <  1:112080/140‑1 (MQ=255)

                                                        cgaCCGGGGCAGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCGACCGGGGCAGCCGGACCAGCCGGACCAACCGGAGCGACTGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgaca                                                                                 <  2:3780630/138‑1 (MQ=17)

                                                        ccaCCGGGGAAGCCGGACCACCCGGACCACCCGGAGCTTCGGGAGCCACGGGACCGACAGGGGCACCCGGAGGAGCCGGAACACCCGGAGCGAGAGTAGCGACAGGAGCTACCGGGGATGCCGGCCCAGCCggcgcgaca                                                                                 <  2:2624498/138‑1 (MQ=12)

                                                        cTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCGACGGGAGCTACCGGGGAAGCCGGTCCAGCCGTACCAACCGGAGCGACAGGGGCGACAGGAGCTAGCGGGGAAGCCGGACAAGCCggagcgacc                                                                                 >  2:123901/1‑139 (MQ=14)

                                                        cTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGTGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgaca                                                                                 <  2:4234255/140‑1 (MQ=255)

                                                          aCCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACGGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacagg                                                                               <  1:1595723/140‑1 (MQ=255)

                                                          aCCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACTGGAGCCACGGGAGCAACCGGGGAAGCCGGACCAGCAGGACCAACCGGAGCGACACGAGCGACAGGAGAGACCGGGGAAGCCGCACCCTCCggagcggctcg                                                                               >  1:3789973/1‑135 (MQ=14)

                                                          aCCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTTCCGGGGAAGCCGGACCAGCCGGACCAACGGGAGCGACTGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacagg                                                                               <  1:2658342/140‑1 (MQ=255)

                                                          aCCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                                                                               <  1:3004342/124‑1 (MQ=255)

                                                                 aacccggaccagccggaccaCCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgaca                                                                        <  1:3643205/137‑1 (MQ=255)

                                                                  agccggaccagccggaccAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCCACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacgggagcgacag                                                                       >  1:261560/1‑140 (MQ=255)

                                                                  agccggaccagccggaccAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacag                                                                       >  1:4143911/1‑140 (MQ=255)

                                                                   tccggaccagccggcccaCCCGGAGCGACGGGAGCCACGGGAGCGACGGGGGATGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacagg                                                                      <  2:3327418/139‑1 (MQ=17)

                                                                   gccggaccagccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgaccggagcgacagg                                                                      >  2:2184347/1‑140 (MQ=255)

                                                                     cggaccagccggaccaCCCGGAGCGACGGGAGCCACGGGAGCTACCGGCGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggag                                                                    <  2:3481008/140‑1 (MQ=255)

                                                                     cggaccagccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgaca                                                                                 <  2:2987740/127‑1 (MQ=255)

                                                                         gcagccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACGGGGGAAGCCGGACCAGCCGGACCAACCGGAGGGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggagcgac                                                                <  1:702461/139‑1 (MQ=255)

                                                                         ccagccggaccaACCGGCCCCACGGGAGCCACGGGAGCTACCGGGGACGCCGGACCAGCCGGACCAACCGGAGCCACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggagcgac                                                                <  2:1299247/140‑1 (MQ=17)

                                                                         ccagccggaccaACCGGAGCTACGGGACCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCCACGGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggagcgac                                                                <  1:3446900/140‑1 (MQ=255)

                                                                         ccagccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggagcgac                                                                <  1:856501/140‑1 (MQ=255)

                                                                         ccagccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggagcgac                                                                <  1:311163/140‑1 (MQ=255)

                                                                         ccagccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggagcgac                                                                <  1:2824227/140‑1 (MQ=255)

                                                                         ccagccggaccaACCGAAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggagcgac                                                                <  1:2434764/140‑1 (MQ=255)

                                                                          cagccggaccaACCGGAGCGACGGGAGCCAGGGGAGCTCCGGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGTGCTCCCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggagcgaca                                                               <  1:2037065/140‑1 (MQ=17)

                                                                            gccggacccCCCGGAGCGCCGGGCCCACCGGGAGCTACCGGGGAAGCCGGACCACCCGGACCAACCGGAGCGACAGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGagcgacaggagcgacaggagcgacagg                                                             <  1:2184482/140‑1 (MQ=14)

                                                                             ccggaccaCCCGGAGCGACGGGAGCCACGGGAGCTACGGGGGAAGCCGGACCCGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAgcgacaggagcgacaggagcgacagga                                                            <  1:51252/140‑1 (MQ=255)

                                                                             ccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCCGCCGGACCAACCGGAGCGACAGGTGCGACCGGAGCTACCGGGGAAGCCGGACCGGCCGGAgcgaccggagcgaccggagcgaccgga                                                            >  2:4067214/1‑140 (MQ=14)

                                                                                gaccaCCCGGAGCCACCGGAGCCACCGGAGCTACCGGGGAACCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCt                                                         <  1:3219310/140‑1 (MQ=14)

                                                                                  ccaTCCGCACCGACGCGAGCCACGCCACCTACCGTGGAAGCCGGACCCGCCGGACCATCCGTAGCGCCAGCAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCCAc                                                       <  1:3077446/140‑1 (MQ=17)

                                                                                  ccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAgcgacaggagcgacaggagcgacagga                                                            >  1:78401/1‑135 (MQ=255)

                                                                                  ccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAgcgacaggagcgacaggagcgacagga                                                            <  2:78401/135‑1 (MQ=255)

                                                                                     acgggtgcgcCGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCgg                                                    <  2:2855643/134‑1 (MQ=255)

                                                                                              accggAGCCACGGGAGCTACCGGGGCAGCCGGACCAGCCGGACCACCCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTgg                                           <  2:1747938/137‑1 (MQ=255)

                                                                                               ctggAGCCTCGGGAGCTACCTGGGAATACGGACCAGCAGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGa                                          <  2:2446996/138‑1 (MQ=17)

                                                                                               cGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACCGGAGCGACTGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGa                                          <  2:4057578/140‑1 (MQ=255)

                                                                                               cGGGAGCCACGGGAGCAACCGGCGACTCCGGACCAGCCGGACCACCCGGAGCGACTGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGCCAGGAGCGACAGGAGCGACAGGAGCTACCGGGGACGCTGGa                                          <  2:1843404/140‑1 (MQ=17)

                                                                                                gggAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCCACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCCACCGGCGCGACGGGAGCCACCGGGGCGACCGGGGCGAGCGCGGAAGCAggtc                                         >  2:3109589/1‑138 (MQ=14)

                                                                                                   aGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAg                                      <  2:2022194/140‑1 (MQ=255)

                                                                                                    gCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGc                                     >  1:3895575/1‑140 (MQ=255)

                                                                                                     ccACGGGAGCTACCGGGGCCGCCGGACCAGCCGGACCACCCGGAGCTACAGGAGCGCCAGGAGCTACCGGGGCAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCt                                    <  1:2528649/140‑1 (MQ=17)

                                                                                                     ccACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCt                                    <  1:3642331/140‑1 (MQ=255)

                                                                                                     ccACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCt                                    <  1:609267/140‑1 (MQ=255)

                                                                                                        cGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGa                                 >  2:3185986/1‑140 (MQ=255)

                                                                                                            aGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgacaggagcga                                                                                                                       >  2:854517/1‑50 (MQ=255)

                                                                                                                aCCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACAGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACggg                         <  1:222074/140‑1 (MQ=255)

                                                                                                                aCCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACggg                         <  1:872910/140‑1 (MQ=255)

                                                                                                                aCCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACggg                         <  1:1027120/140‑1 (MQ=255)

                                                                                                                     tgAAGCCGGACCAGCCGGACCAACCGGTGCGACAGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGcgggagcgacgggagcga                    <  1:3698168/139‑1 (MQ=255)

                                                                                                                      gAAGCCGGACCAGCCGGACCAACCGTAGCGACACGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACTGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGAc                   <  1:3551594/140‑1 (MQ=255)

                                                                                                                      gAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGCGCGGCGGGAGCTACCGGGGACGCGGGAGCCGCGGGGGCGGCGGGCGCGAc                   >  1:1331449/1‑140 (MQ=14)

                                                                                                                      gAAGCCGGACCAGCCGGACCAACCGGAGCCACAGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAACCTGGACCAGCTGGAGCGACGGGAGCGAc                   <  1:567410/140‑1 (MQ=255)

                                                                                                                        tgccggaccagccggaccaCCCGGAGCGACTGGAGCGAGTGGAGCTACCGGGGAAGCGGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAg                 <  1:1813307/139‑1 (MQ=14)

                                                                                                                        cgccggaccagccggcccaACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAg                 <  1:1813154/139‑1 (MQ=255)

                                                                                                                         gccggaccagccggaccaACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGCAGCTGGACCAGCTGGTGCGACGGGGGCGACggg                >  2:1431538/1‑140 (MQ=255)

                                                                                                                         cccggaccagccggacccACCGTATGTACTGGAGCGACCGCAGCTACCGGGGACGCCGGACCAGCCGCAGCGACAGGAGCGACAGGAGCTACAGGAGCTACCGGGGAAGCTGGAACAGCTGGAGCGACGGGAGCGACAgg                <  1:2413760/139‑1 (MQ=14)

                                                                                                                           cggaccagccggaccaACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAg              >  2:2581600/1‑140 (MQ=255)

                                                                                                                              accagccggaccaACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTa           <  1:3857095/140‑1 (MQ=255)

                                                                                                                                   ccggaccaACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGACGCAGGAGCAGCTGGAGCGACGGGAGCGACCGGAGCTCCCggg      >  1:1548356/1‑140 (MQ=17)

AGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAG  >  NZ_CP034943/607274‑607548

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`