| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,014,009 | G→T | 8.1% | R56R (CGC→CGA) | EO946_RS05230 ← | polysaccharide deacetylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,014,009 | 0 | G | T | 8.1% | 595.7 / 12.0 | 245 | R56R (CGC→CGA) | EO946_RS05230 | polysaccharide deacetylase |
| Reads supporting (aligned to +/- strand): ref base G (99/118); new base T (26/2); total (125/120) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.71e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 245 total aligned reads displayed.
CAAGCGGTTTGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCATAAGCAAAAGCAGCACACATAAAACTGCTAAACTTGCAAATTTAAAAGCAAGCGAAATGGCAGAA > NZ_CP034943/1013871‑1014147 | ttGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTgg > 1:1176914/1‑140 (MQ=255) ttGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTgg > 2:1215911/1‑140 (MQ=255) tGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGc < 2:4144393/140‑1 (MQ=255) tGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCATCAGGCTTTCCTTGTCATTGAGAAGCTGGc > 1:2396753/1‑140 (MQ=255) ggCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTGAGCTTCAGGCTTTCCTTCTCATTGCGAACCTGGCCGtttt > 1:3663929/1‑139 (MQ=255) ggCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTtg < 2:3175116/140‑1 (MQ=255) ggCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTtg < 2:2997864/140‑1 (MQ=255) gCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGttttt > 1:452998/1‑138 (MQ=255) gCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTtgt > 2:1969170/1‑140 (MQ=255) gCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTtgt > 2:2290485/1‑140 (MQ=255) gCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTtgt > 1:225274/1‑140 (MQ=255) gCTGACGGGCCATCATCGAAGGATAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCACATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTACTTCTCATTGCGAAGCTGTCCGTTtgt > 2:3090350/1‑140 (MQ=255) cTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCATGCTTTCCTTCTCATTGCGAAGCTGGCCGTTtttg > 1:3278044/1‑140 (MQ=255) cTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTAAGCGTAAGGCTTTCCTTCTCATTTCGAAGCTGGCCGTTtgtg > 1:522837/1‑140 (MQ=255) gACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATAAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTATCATTGCGAAGCTGGCCGTTtgttgt > 2:565655/1‑140 (MQ=255) aCGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGGTTttggtg > 2:698018/1‑140 (MQ=255) cgtcacatcatCGAAGGTTAATTAAAAAGTCAAATCTAAAATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTAAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGtggtgg > 2:1895355/6‑140 (MQ=255) cGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTGAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGtggtgg > 1:1975186/1‑140 (MQ=255) cGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGtggtgg < 1:3710894/140‑1 (MQ=255) cGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGtggtgg > 2:1575610/1‑140 (MQ=255) cGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGtggtgg > 2:2220976/1‑140 (MQ=255) cGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGtggtgg < 1:3758465/140‑1 (MQ=255) cGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGtggtgg < 1:2375394/140‑1 (MQ=255) cGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGtggtgg < 1:4089700/140‑1 (MQ=255) cGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCAATGCGAAGCTGGCCGTTTGtggtgg > 1:940725/1‑140 (MQ=255) cGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTAAGCTTCAGGCTTTCCTTCTCATTTCGAAGCTGGCCGGTTGttgtgg > 1:2424366/1‑140 (MQ=255) cGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTAAGCTTAATTCTTTCCTTATAATTTCGAACCTTGCCGTTTTttgtgg > 1:2348320/1‑140 (MQ=255) cGGGCCATCATAGAAGGTTAAGTAAAACGACTTATCTCCCATGTTCTGCTTTTTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCCGGCTTTCCTTCTCAGTGCGAAGCTGGCCGGTTGtggtgg < 1:3681780/140‑1 (MQ=255) catcatCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTTGGGTGGCAGTg > 1:1309659/1‑140 (MQ=255) catcatCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCGGCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTGGTGGTGGCAGTg > 2:1414985/1‑140 (MQ=255) atcatcGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGGTTGGGGTGGGCGTGa > 1:2982604/1‑140 (MQ=255) ggTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTTTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTGAGCTTGAGGCTTTGCTTGTAATTGCGTAGCTGGCCGTTTGTGGTTGCAGTGACTTCCtttt > 2:1497497/1‑139 (MQ=255) aaGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTAAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCttttgttt > 1:1476814/1‑135 (MQ=255) aGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTc > 2:1816187/1‑140 (MQ=255) aGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTc > 2:2075478/1‑140 (MQ=255) aaCCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTTCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATg > 1:3598114/1‑140 (MQ=255) aaCCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATg < 2:173090/140‑1 (MQ=255) aCCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGa < 1:4160420/140‑1 (MQ=255) ccGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAg > 2:729309/1‑140 (MQ=255) cGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGc < 2:2891959/140‑1 (MQ=255) cGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGc < 1:605146/140‑1 (MQ=255) cGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGc < 2:2950198/140‑1 (MQ=255) cGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTGGACGCGTTGCAGGTCATTGACAAGCTTGCCCGTTTTGGTGGCAGTTAATTACTTTTGTTTAGAttatc > 1:1392333/1‑136 (MQ=255) cGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCACCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGc < 1:549134/140‑1 (MQ=255) cGTCTTATCTCCCAGGTTCTGCTGTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGc < 2:2345287/140‑1 (MQ=255) tCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCGTTACTTCTCATTGCGAAGCTGGCCGTTTTTTGTGGCAGTGACTTACTTTTCTTTAGATGAGGTg > 1:2653327/1‑140 (MQ=255) cTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCGTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGt > 2:800387/1‑140 (MQ=255) tctcCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGa < 1:1685397/140‑1 (MQ=255) tctcCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGa < 2:1176914/140‑1 (MQ=255) tctcCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGa < 1:729309/140‑1 (MQ=255) tctcCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGa < 1:308044/140‑1 (MQ=255) ctcCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGaa < 1:1808823/140‑1 (MQ=255) ctcCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGaa < 1:3913187/140‑1 (MQ=255) ctcCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGaa < 1:3821739/140‑1 (MQ=255) ctcCCATGTTCTGCTTTGTCTGCAGATGTTGTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGaa < 2:274834/140‑1 (MQ=255) cATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTTCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTACATGAGCTGTTGGAATAcc > 1:4243662/1‑140 (MQ=255) cATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTTACTTACTTTGCTTTCGAAGAGCTGTTGGtataac > 2:3821739/1‑138 (MQ=255) cATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCGTAAGGGGTTGCTTCTCATTTCGAAGCTGGGCGGTTTTGGTGGCACTTTCTTACATTTCTTTAGATGAGGTTTTTGAATaac > 1:2135558/1‑138 (MQ=255) gTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTa < 2:3518285/140‑1 (MQ=255) ttCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTAAGGCTTTCCTTATCATTGCGAAGCTGGCCGTTTGTGGTGGCAGGTACTTACATTTGTTTCGATGAGCGGTTTGAATAcacaat > 1:1640189/1‑135 (MQ=255) tGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAAt < 1:3020412/140‑1 (MQ=255) tGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAAt < 2:1292488/140‑1 (MQ=255) cTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGGTTCAGGCTTTGCGTCTCATTGGGAAGCGGGCCGTTTGTGGGGGCAGTGACTTGCTTTTCTTTGGATGTGCTGTTTGTATAACCGAgcagaa > 1:2719569/1‑135 (MQ=255) cTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGaa < 1:2285194/127‑1 (MQ=255) tCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTGCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTTCGTTAGATGAGCTGTTTGAATAACCAAGAAAAACCaaa > 1:2096104/1‑138 (MQ=255) tCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAATCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCaaa > 2:3066970/1‑138 (MQ=255) tCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTGCTTTTCTTTCGTTGAGCTGTTGGAATACCCTAGAATCACCATa > 2:1164190/1‑140 (MQ=255) tCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCGTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGACTACCCTAGAATCACCATa > 2:2460699/1‑140 (MQ=255) tCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTAAGCTTCAGGGTTTCCTTCTCATTTCGAAGCTGGCCGTTTTTGGTGGCACTGACTTCCTTTTCTTTAGATGAGCTGTTGGGATAACCGATAATAACCaaa > 1:1850775/1‑138 (MQ=255) tCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTAAGCTTCAGGCTTTACTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTTGTTTCGATGTGCTGTTTGGATAACCTAGAATCACCaaa > 1:2746843/1‑138 (MQ=255) tCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTCTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCATa > 2:2783998/1‑140 (MQ=255) gCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCATAAGc < 1:1352333/140‑1 (MQ=255) gCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCATAAGc < 1:104226/140‑1 (MQ=255) aGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTGAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTAGATGATCTGTTTGTATAACCTAGAATCACCATAAGCaa > 2:4184279/1‑140 (MQ=255) aGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTGTGTGGTGGCACTGACTTACTTTGGGTTGGATGAGCGGTTGGGATACCCAATACTCACCAAAAGCaa > 1:3196645/1‑140 (MQ=255) aGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTACTCTTCATGCGTTCCTTATCATTGCGGAGCAGGGCGTTTGTGGTTGCAGTGACTTCCATTGCTTTAGATTAGCAGTTTGAAAACACTAGAATCAACATAAGCaa > 2:889021/1‑140 (MQ=255) tGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCATAAGCAAAag < 1:786253/140‑1 (MQ=255) ttttATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTGAGGCTTTCCTTGTCATTTGGAAGCTGGCCGTTTGTTGTGGCAGTGACTTCCATTGGTTTCGATGAGCGGTTTGGATACCCGATAATGACCATAACCAAAaaca > 1:1538043/1‑140 (MQ=255) ttttATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGGCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTAGATGAGCTGTTTGAATTCCCTAGAATCACCATAAGCAAAagca > 2:593542/1‑140 (MQ=255) ttttATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGAt < 1:2859204/100‑1 (MQ=255) ttttATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCATAAGCAAAagca > 2:4015394/1‑140 (MQ=255) ttttATCAGCAGATCGGGGGAGTCGTTTTTCAGCGTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGGTTTCGATGAGCTGTTGGAAAACCCTACAATCACCATAAGCAAAagca > 2:3243962/1‑140 (MQ=255) ttATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCATAAGCAAAagcagc < 2:225274/140‑1 (MQ=255) ttATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCATAAGCAAAagcagc < 1:2919479/140‑1 (MQ=255) ttATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCATAAGCAAAagcagc < 1:1828136/140‑1 (MQ=255) ttATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCATAAGCAAAagcagc < 2:3966423/140‑1 (MQ=255) tgaTCCGCAGATCGGGGGCCTCGTTTTTCAGCTTCAGGCTTGCCTGCTCCTTGCGAAGCTGGCCGTTTGTGGTGGCCGTGTCTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCATAAGCAAAagcagc < 1:3418162/138‑1 (MQ=255) ggaTCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCGGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCATAAGCAAAagcagc < 1:3553402/138‑1 (MQ=255) agATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCATAAGCAAAAGCAGCACACATaa < 2:2405492/140‑1 (MQ=255) agATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCATAAGCAAAAGCAGCACACATaa < 2:340748/140‑1 (MQ=255) agATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCATAAGCAAAAGCAGCACACATaa < 2:1197248/140‑1 (MQ=255) agATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCAGTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTGTCGATGAGCTGTTGGAATACCCTAGAATCACCATAAGCAAAAGCAGCACACATaa < 1:417468/140‑1 (MQ=255) tCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAAt > 2:1333544/1‑101 (MQ=255) cTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCATAAGCAAAAGCAGCACACATAAAACTGCTAAACTTGCAAATTTAAaagcaag < 1:2066295/140‑1 (MQ=255) cTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACGTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCATAAGCAAAAGCAGCACACATAAAACTGCTAAACTTGCAAATTTAAaagcaag < 1:3509012/140‑1 (MQ=255) tCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCATAAGCAAAAGCAGCACACATAAAACTGCTAAACTTGCAAATTTAAAAGCAAGCGa > 1:3054186/1‑140 (MQ=255) ccTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCATAAGCAAAAGCAGCACACATAAAACTGCTAAACTTGCAAATTTAAAAGCAAGCGaa < 1:2572703/140‑1 (MQ=255) ttCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCATAAGCAAAAGCAGCACACATAAAACTGCTAAACTTGCAAATTTAAAAGCAAGCGAAAt < 1:999390/140‑1 (MQ=255) tGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCATAAGCAAAAGCAGCACACATAAAACTGCTAAACTTGCAAATTTAAAAGCAAGCGAAATGGCAGaa > 1:2218663/1‑140 (MQ=255) tGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCATAAGCAAAAGCAGCACACATAAAAATGCTAAACTTGAAAATTTAAAATCAAGCGAAATCGCAGaa > 1:3337843/1‑140 (MQ=255) | CAAGCGGTTTGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCATAAGCAAAAGCAGCACACATAAAACTGCTAAACTTGCAAATTTAAAAGCAAGCGAAATGGCAGAA > NZ_CP034943/1013871‑1014147 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |