| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,366,028 | A→C | 7.0% | T176P (ACG→CCG) | EO946_RS07135 → | PepSY domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,366,028 | 0 | A | C | 7.0% | 527.7 / 3.8 | 189 | T176P (ACG→CCG) | EO946_RS07135 | PepSY domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base A (79/88); new base C (2/19); total (81/108) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.77e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 192 total aligned reads displayed.
AAAGAAGATGGAGAAACATACGAAGTGAAGATAGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTG > NZ_CP034943/1365890‑1366163 | aaaGAAGATGGAGAAACATACGAAGTGAAGATAGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAAc > 2:3386030/1‑140 (MQ=255)aaaGAAGATGGAGAAACATACGAAGTGAAGATAGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAAc > 2:4243210/1‑140 (MQ=255) gaagaTGGAGAAACATACGAAGTGAAGATAGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAAcggg < 1:2814088/140‑1 (MQ=255) aagaTGGAGAAACATACGAAGTGAAGATAGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAAcgggc > 1:4160883/1‑140 (MQ=255) agaTGGAGAAACATACGAAGTGAAGATAGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAAcgggcg < 1:1661804/140‑1 (MQ=255) gagaAACATACGAAGTGAAGATAGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACa > 2:3542794/1‑140 (MQ=255) aaCATACGAAGTGAAGATAGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCgc > 2:501990/1‑139 (MQ=255) aCATACGAAGTGAAGATAGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGa < 1:2994360/140‑1 (MQ=255) aCATACGAAGTGAAGATAGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGa < 1:3746204/140‑1 (MQ=255) aTACGAAGTGAAGATAGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATg > 2:1564513/1‑140 (MQ=255) aGTGAAGATAGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAg > 1:2004842/1‑140 (MQ=255) aGTGAAGATAGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAg > 1:1168962/1‑140 (MQ=255) aaGATAGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGAtct < 2:165587/140‑1 (MQ=255) aGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGa < 1:3373261/116‑1 (MQ=255) aGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGa > 2:3373261/1‑116 (MQ=255) aGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGaaa < 1:3699666/140‑1 (MQ=255) gACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGaaaa > 1:172489/1‑140 (MQ=255) gACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGaaaa > 1:661847/1‑140 (MQ=255) aCATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACAGATTACGAAAAAAGAAGCCAAAACCATTTCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGaaaaa > 1:4089577/1‑140 (MQ=255) aaTGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTgg > 1:3247036/1‑139 (MQ=255) aaTGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGa > 1:3734003/1‑140 (MQ=255) aaTGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGa > 2:221739/1‑140 (MQ=255) aaTGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGa > 2:3731875/1‑140 (MQ=255) aaTGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAACTGa > 1:913532/1‑140 (MQ=255) aaTGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATAACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGa > 2:1079965/1‑140 (MQ=255) aTGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAg > 1:2250557/1‑140 (MQ=255) aTGCAAAAGCAGTCGTGTCAGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAg > 1:1160518/1‑140 (MQ=255) tGCACAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAACACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAgg < 1:1607266/140‑1 (MQ=255) tGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAgg < 2:804956/140‑1 (MQ=255) aaaaGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCa < 1:15567/140‑1 (MQ=255) aaaaGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCa < 1:2214418/140‑1 (MQ=255) aaGCAGTCGTGTCTGCTGATCGAATCCGCGGTGAAGATCAACAAAAAACACCGAGTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCAct > 1:3550793/1‑140 (MQ=255) gCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAACACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCActct < 1:209675/140‑1 (MQ=255) gCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCActct < 1:2771505/140‑1 (MQ=255) gCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCActct < 1:981715/140‑1 (MQ=255) gCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCActct < 1:450453/140‑1 (MQ=255) gTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGAtct < 2:393623/116‑1 (MQ=255) gTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGAtct > 1:2563317/1‑116 (MQ=255) tCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATc > 2:1862859/1‑140 (MQ=255) tCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATc > 2:3762828/1‑140 (MQ=255) tgtCTGCTGATCGAATCAGCGGTGAAGATCAACAAACAACACCGATTACGAAAAAAGAAGCCAAAACCAGTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCttt < 1:3870772/140‑1 (MQ=255) tgtCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCttt < 1:4257933/140‑1 (MQ=255) gctgATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAACAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGt < 2:455466/140‑1 (MQ=255) gctgATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAACACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGt < 1:181377/140‑1 (MQ=255) gctgATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGGGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGt < 2:1764767/140‑1 (MQ=255) gctgATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGt < 1:586066/140‑1 (MQ=255) gctgATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGt < 2:1937401/140‑1 (MQ=255) gctgATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCAAAAAAAGTGAGGGCACTCTCATCTTTGAAGt < 1:3104787/140‑1 (MQ=255) aTCGACTCAGCGGTGAAGATCAACAAAAAACACCGAGTACGACAAATGAAGCCAAAACCAGTGCTGAGCGAGAACCGGGCGGGACAGCGGAGGAGGCAGAGCTCGAAAAATGTGAGGGCCCTCTCATCTGTGAAGTGGag > 1:2510752/1‑139 (MQ=255) aTCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGAt > 1:1126750/1‑140 (MQ=255) aTCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGAt > 1:3047352/1‑140 (MQ=255) aTCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGAt > 1:62938/1‑140 (MQ=255) aTCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGAt > 1:528680/1‑140 (MQ=255) aTCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGAt > 1:3944500/1‑140 (MQ=255) aTCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGAt > 1:2052727/1‑140 (MQ=255) gAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAACCGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGtt < 1:241681/140‑1 (MQ=255) aTCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGa > 1:1222705/1‑140 (MQ=255) cAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATc < 2:3990722/140‑1 (MQ=255) gTGAAGATCAACAAAAAACCCCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCg < 1:3815925/140‑1 (MQ=255) gTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCg < 1:213001/140‑1 (MQ=255) gAAGATCAACAAAACACACCGATTACGAAAAAAGAAGCCAAACCCATGGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCACATCTTTGAAGTGGATGTTGATCTTCCGga < 1:3424579/140‑1 (MQ=255) gAAGATCAACAAAAACCACCGATTACGAACAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGga < 1:3517682/140‑1 (MQ=255) gAAGATCAACAAAAAACCCCGATTACGCAAACTGCAGCCAAAACCCTTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAACACTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGga < 2:66416/140‑1 (MQ=255) gAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGga < 2:3174543/140‑1 (MQ=255) gAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGga < 1:2943217/140‑1 (MQ=255) gAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGga < 2:1969408/140‑1 (MQ=255) aaGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCAct > 2:608700/1‑107 (MQ=255) aaGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGgat > 2:3500931/1‑140 (MQ=255) caacaaAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGgatg > 2:657355/1‑136 (MQ=255) acaaAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAaag > 2:2852675/1‑140 (MQ=255) caaAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAaaga > 2:2522289/1‑140 (MQ=255) caaAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAaaga > 2:1114142/1‑140 (MQ=255) caaAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAaaga > 1:905989/1‑140 (MQ=255) aaCACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGa > 1:13257/1‑140 (MQ=255) aTTACTAAAAAACAACCCAAAACCTTTGCTGAGCGATAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGAACTCTCATATTTGAAGTGGATGTTGATCTTCCGTATTATAAAGAAGCGACTGTGaa < 2:4089577/140‑1 (MQ=255) ctaaaaaaCAAGCAAAAACCTTTGCTGCGCGATAACGGGGCGGGACAGCGGATGACGCATATCTCTAAAAAAGTGTGGGCACTCTAATCTTTTAAGTGTTTTTTGATGTTCCGTATGATAAAGAAGCGACTGTGAAAAtt < 2:2397987/138‑1 (MQ=255) cGAAACAAGAACCCAAACCCTTTGCTGCGCGAGAAACGGGCGGGACAGGGGATGACTCAGATATCGAAAAAAGTGAGGGCACTATAATGTTTGATTTGGTTGTTGATCTTCCGCATGATAAACACGCGACTGTGAAAAtt < 2:2101179/140‑1 (MQ=255) cGAAAAAACAACCAAAACCCAGTGCTCCGCGAGAACCGGGCGGGACTGCGGATGACCCAGATCTCTAAAAAAGTGAGGGCACTCTCATATTTGAAGTGTTTGTTGATCTTCCGGATCATAAAGAAGCGACTGTGAAAAtt < 2:3047352/140‑1 (MQ=255) attaagCCAAAACCATTCCTGCGCGCCAAAGGGGCGGTACATGGTCTGACGCACATGTTCAAAAAATTGCTGGCACTATAATTTTTTAAGTGGATGTTTATATACCGGATGATATTTAAGCGACTGTGAAAATTAATGcc < 2:1010176/137‑1 (MQ=255) gCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGa < 2:1463121/41‑1 (MQ=255) gCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGa > 1:1463121/1‑41 (MQ=255) aaCCTTTGCTGAGCTACAACCGGGCGGGACAGCGGTTGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGGGGTTGTTGATCTTCGGGATTATAACCAAGCGACTGTGAAAATTAATGCCTACACCGGaa < 2:1396474/140‑1 (MQ=255) aaCCATGGCTGAGCTAAAAACGGGCGGGACAGCGGATGACGCTGATCTCGAAAAAAGTGAGGGAACTATCATCTTTTATGTGTATGTTTATCTTCGGGATCATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGaa < 2:3676870/140‑1 (MQ=255) aaCCATGGCTGAGCGAGAAACGGGCGGGACAGCGGATCACGCAGATATCTAAAAAAGTGAGGGCACTATAATATTTGAAGTGCATGTTTTTCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGaa < 2:3413620/140‑1 (MQ=255) cctgtGCTGAGGGAGAACCGGGCGTGACTGCGTATCACGATTATCTCGAAAAAAGTGAGGGCACTCTAATTTTTTAAGTGTATTTTTATCTTCCGGATGATAAATAAGCGACTGTGAAAATTAATGCCTACACCGGAAAg < 2:2695039/136‑1 (MQ=255) cttGCTGAGCGACAAACGGGCGGGACAGCGGATGACCCAGATCTCCAAAACAGTGAGGGCACTCTCATATTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGt < 2:3133483/139‑1 (MQ=255) ttGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGtt > 2:2742054/1‑140 (MQ=255) ttGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGtt > 2:1866511/1‑140 (MQ=255) tGCTTAGCGAGAAAAGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGGTGATCTGCCGGATGATAAAGAAGCGACTGTGAAAATTAATGACTACAACGGAAAGGTTg > 2:3710012/1‑140 (MQ=255) cttaGCGATAAACGGGCTGCACCGGGGTTGACTCAGATCTCCAAAAATGTGAGGCCAATATAATCTTTTAAGTGCTTGTTGATGTTCCGGATGATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa < 1:960552/137‑1 (MQ=255) cttaGCCAGAACCGGGCGGGACCGGGGATGACGCAGATCTCTAAAAACGTGAGGGCACTCTCATGTTTCAAGTGTATGTTGATCTTCCGCTTTATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa < 2:254744/137‑1 (MQ=255) cTGAGCTACAACCGGGCGGGACCGCGGTTGACGCATATCTCTAAAAAAGTGAGGCCACTCTAATCTTTGATGTGTATGTTGATCTTCCGTATGATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa < 1:3056687/140‑1 (MQ=255) cTGAGCGAGAACCGGGCGGGACCGGGGATGACGCTTATCTCTAAAAAAGTGAGGCCACTCTCATCTTTTAAGGGGTTGTTTATGTTCGGGATTATAAATACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa < 2:536407/140‑1 (MQ=255) aGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAAc > 1:2696526/1‑140 (MQ=255) gctagaAACGGGCGGGACCGCGTATGACGCATATCTCTAAAAAAGTGAGGGCACTATAATATTTCAAGTGTATGTTTATCTTCCGTATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa < 2:172489/137‑1 (MQ=255) gCGAGAACCGGGCGGCACAGCGGATGACGCAGACCTCCAAAAACGTGAGGGCACTCTAAACTTTGAGGTGGTTGTTTATCTGCCGGTTTATAAACCAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa < 2:3564223/140‑1 (MQ=255) cGAGAAACGGGCGTCACTGCGGATGCCGAATTTCTCGAAAAAAGTGAGGGAACTATCATATTTTAAGTGGATGTTGCTCTTCCGGATGATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAt < 2:2004842/140‑1 (MQ=255) cGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGCCACTCTCATCTTTGAAGTGTTTGTTGATCTTCCGGATTATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAt < 2:1168962/140‑1 (MQ=255) agaAACGGGCGGTACCGCGTCTGACGCAGATCTCTAAAAAATTGAGGGAACTATCATCTTTGAAGTGGATGTTGATCTTCCGTATGAAAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATtg < 2:3200222/140‑1 (MQ=255) aaaCGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCa < 1:1114009/48‑1 (MQ=255) | AAAGAAGATGGAGAAACATACGAAGTGAAGATAGACATGAATGCAAAAGCAGTCGTGTCTGCTGATCGAATCAGCGGTGAAGATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTG > NZ_CP034943/1365890‑1366163 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |