| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,644,019 | A→C | 6.5% | V322V (GTT→GTG) | ruvB ← | Holliday junction branch migration DNA helicase RuvB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,644,019 | 0 | A | C | 6.5% | 541.2 / 2.2 | 209 | V322V (GTT→GTG) | ruvB | Holliday junction branch migration DNA helicase RuvB |
| Reads supporting (aligned to +/- strand): ref base A (131/54); new base C (2/22); total (133/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.35e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 210 total aligned reads displayed.
TTTCACAAAAATATCTCCCGGCATCTTGCCGACAAAATGCAATACTGCTCCGATGATAAGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCTTCAATCGTATGCGGTTCTTCGCCAATCGTGGCTGAAATGGTATCGAGACCCACCGGGC > NZ_CP034943/2643883‑2644155 | tttCACAAAAATATCTCCCGGCATCTTGCCGACAAAATGCAATACTGCTCCGATGATAAGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACg > 1:2825202/1‑140 (MQ=255) taacaAAAATATCTCCCGTCATCTTGCCTACAAAATTCAATACTGCTCCGATCATAATAAAAACAGCTCCAATAATCATAATGATCTTAGGGAATTCTGTCATATCGTGTATCTTATATTTTTATATGATGATaatagtc < 2:2305431/138‑6 (MQ=255) taaaaaaaaTATCTCCCGGCATCTTGCCGACAAAATGCAATAGTGCTCCGATGATAAGCAAAACAGCTCCAAGAATAATATTGATCTTAGGGAATTCAGTCATATGGGGGAGCCTCCATTTGGAAATGATGATAAACGGc < 1:3391794/136‑1 (MQ=255) tCACAAAAATATCTCCCGGCATCTTGCCTACAAAATGCAATACTGCTCCGATGATAAGAAAAACAGCTCCAACAATAATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGTTGATAAACGGc < 2:4021552/140‑1 (MQ=255) tCACAAAAATATCGCCGGGAATCGTGCCTAAAAAATGCAATACTGCTCCGATGATAAGAAAAACAGCTCCAATAATAATAATGATCTTAGGTAATTCAGTCATTTGGGGGAGCCTCAATTTGGAAATGATGATACACGGc < 1:2626332/140‑1 (MQ=255) tctcCCGGCATCTTGCCGACAAAATGCAATACTGCTCCGATGATAACCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGa < 2:956288/140‑1 (MQ=255) ttGCCGACAAAATGCAATACTGCTCCGATGATAAGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGACTTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCcgcg > 2:1463558/1‑140 (MQ=255) ttGCCGACAAAATGCAATACTGCTCCGATGATAAGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCcgcg > 2:1976624/1‑140 (MQ=255) gCCGACAAAATGCAATACTGCTCCGATGATAAGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCgcggc > 1:2911655/1‑140 (MQ=255) aaaaaTGAAATAGTGCTCCGATTATAAGCAAAACAGCTCAAAGAATAATAATGATCTTAGGTAATTCAGTCATATCGGGGAGCCTCCATTTGTAAATTATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCt < 1:3684447/139‑1 (MQ=255) gCTCCGATGATAAGCAAAACCGCTCCAAGACGCATAATGAACTTAGGGAAGTCAGTCATTTCGGGCACCCTCAAGTTGGAAATGATGATACACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGa < 2:623085/140‑1 (MQ=255) cTCCGATGATAAGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGTAATGATGATAAACGGCCGGTGTCACGACCCGTCCCCGCGGCGTGCTTTGAAGAACTCCGAt > 2:3220776/1‑140 (MQ=255) cTCCGATGATAAGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGACAGGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGACTAAATCCGAt > 1:1085218/1‑140 (MQ=255) cTCCGATGATAAGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCCCGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGAt > 1:3216945/1‑140 (MQ=255) cTCCGATGATAAGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGAt > 1:3149300/1‑140 (MQ=255) cTCCGATGATAAGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGAt > 2:1517264/1‑140 (MQ=255) cTCCGATGATAAGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGAt > 2:3087335/1‑140 (MQ=255) cTCCGATGATAAGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGAt > 1:1675643/1‑140 (MQ=255) cTCCGATGATAAGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGAt > 1:3506700/1‑140 (MQ=255) cTCCGATGATAAGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGAt > 1:4245192/1‑140 (MQ=255) cTCCGATGATAAGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGAt > 1:242374/1‑140 (MQ=255) cTCCGATGATAAGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGAt > 2:1286884/1‑140 (MQ=255) cTCCGATGATAAGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGAt > 1:876779/1‑140 (MQ=255) cTCCGATGATAAGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGAt > 1:978910/1‑140 (MQ=255) cTCCGATGATAAGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGAt > 2:835381/1‑140 (MQ=255) cTCCGATGATAAGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGAt > 1:2755351/1‑140 (MQ=255) cTCCGATGATAAGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGAt > 1:25187/1‑140 (MQ=255) cTCCGATGATAACCAAAACAGCTCCAAGACTCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAACTGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGAt > 1:3642212/1‑140 (MQ=255) cGATGATAAGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGAGACACGGCCGGTGTCACGATCCTTCCCCGCGGCGGTCTTTGAATACATCCGaggtg > 2:3942814/1‑136 (MQ=255) gattatAAGCAAACCAGCTCCAATAATCATAATGATCTTAGGGAATTCAGTCATCTCGGGGAGCCTCCATTTGGAAATGATGATACACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGc < 1:1533515/140‑1 (MQ=255) gattatAAGAAAAACACCTACAAGAATCATAATGATATTTGGGAATTCAGTCATATCGGGGAGCCTCAATTGGCAACTCATGATACACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGc < 1:522051/140‑1 (MQ=255) gatgatAAGCAAAACAGCTCCAAGAATCATATTGTTCTTAGGTATTTCAGTCTTATGGGGGAGCCTCCATTTGGAAATGATGATACACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGc < 1:2664820/140‑1 (MQ=255) gatgatAAGAAAAACCGCTCCAAGAATCATAATGATCTTAGGGAATTCCGTCATTTGGGGGAGCCTCCATTTGCAAATGATGATACACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGc < 1:3198551/140‑1 (MQ=255) atgatAAGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGTATAAATCCGATTTGCa > 2:3054915/1‑140 (MQ=255) atgatAAGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCa > 2:3356542/1‑140 (MQ=255) atgatAAGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCa > 1:3918778/1‑140 (MQ=255) atgatAAGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCa > 1:1765329/1‑140 (MQ=255) atgatAAGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCa > 1:1206315/1‑140 (MQ=255) atgatAAGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCa > 2:1814786/1‑140 (MQ=255) atgatAAGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCa > 2:221730/1‑140 (MQ=255) atgatAAGCAAAACAGCTCCAAGAATCATAATCATCTTAGGGAATTCAGTCATATCGGCGAGCCTCCATTTGGAAATGATGATAAACTGCCTGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCa > 1:2946909/1‑140 (MQ=255) tgatAAGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATACACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCag < 1:804382/140‑1 (MQ=255) tgatAAGCAAAACAGCACAAACAATCATAAGCATCTTCGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGAGAAACGGCCGGTGTCACGATCCGTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCag < 1:1187976/140‑1 (MQ=255) aaGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCaggagg > 2:2993820/1‑140 (MQ=255) aaGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTGCTTTGAATAAATCCGATTTGCaggagg > 1:4046886/1‑140 (MQ=255) aGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGGGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGt < 1:78242/140‑1 (MQ=255) aGCAAAAAAGCTCCAATAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGTAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGt < 1:2122043/140‑1 (MQ=255) tcAAAACAGCTCCAAGAATCATTATGATCTTAGGGATTTCAGTAATTTCGGGGTGCCTCCATTTGGAATTGATTATAAACGGCCGGTGTCACGATCCTTCCACGCGGCGTTCTTTTAATAAATCCGATTTGCAGGAGGTa < 2:798907/139‑1 (MQ=255) gCAAAACAGCTCCAATAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATACACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTa < 2:1395834/140‑1 (MQ=255) gCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATCTCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTa < 2:4244446/140‑1 (MQ=255) ccAACACACCTCCACGAATCATAAGGATCTCAGGGCCTGCCGTCCTCGCGGGGAGCCGCCCTTTGGCCATGATGAGACACGGCCGGGGTCACGAGCCCGCCCCGCGGCCTTCTTTCAATAAATCCGATTTGCAGCAGGTa < 2:414362/139‑1 (MQ=255) cAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGTGCCTCCATTTGGAAATGATGATAAACGGCAGGTGTCACGATCCTTCCCCTCGGCGTTCTTTGACTAAATCCGATTTGCAGGAGGTAc > 2:2424160/1‑140 (MQ=255) cAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCAGGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTAc > 2:2486900/1‑140 (MQ=255) aaaaCCGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACg < 2:1371347/140‑1 (MQ=255) aaaaCCGCTCCAAGAATCATAATCATCTTAGGCAATTCCGTCATATCGGGGAGCCTCCATTTGTAAATTATGACACACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACg < 1:2308215/140‑1 (MQ=255) aaaaCAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACg < 1:1976624/140‑1 (MQ=255) cgcgccAAGAATCATCATGTTCTTAGGGATTTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCg < 2:3478622/136‑1 (MQ=255) cTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTa > 2:1177031/1‑140 (MQ=255) cccAAGAATCATAAGGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATACACGGCCGGGGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTac < 2:2504997/139‑1 (MQ=255) ccAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTaca < 1:4169531/140‑1 (MQ=255) ccAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTaca < 1:4187796/140‑1 (MQ=255) caacactCATAATGATCTGAGGGAATCCAGTCATATCGGGGCGCCACAATTTGTCAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCATTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTacac < 1:382917/134‑1 (MQ=255) cAAGAATCATAATGATCTTAGGGAATTCAGTCTTATCGGGGCGCCTCCATTTGGAAATGATGATACACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTacac < 1:1586651/140‑1 (MQ=255) cAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTacac < 2:3462952/140‑1 (MQ=255) aGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGt > 2:2935823/1‑140 (MQ=255) accATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGAGAAACGGCCGGGGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCtt < 2:2687233/138‑1 (MQ=255) aTCATAATGATCTTATGTAATTCAGTCATATGGGGGAGCCTCCATTTGGAAATGATGATACACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCtt < 2:1728122/140‑1 (MQ=255) aTCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCtt < 2:3161797/140‑1 (MQ=255) aTAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATACACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCTTCaa < 1:2993820/140‑1 (MQ=255) aTCTTAGGGACTTCAGTCATATCTGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCGCCGCGGCGTTCTTTGAATAAATCCGATTTGCTGGAGGTACGGTTCGTACACGTGTTCAATCGTAt > 2:3497526/1‑140 (MQ=255) aTCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCTTCAATCGTAt > 2:3568500/1‑140 (MQ=255) tCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATACACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCTTCAATCGTATg < 2:499336/140‑1 (MQ=255) tAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCTTCAATCGTATGCgg > 2:2238657/1‑140 (MQ=255) ggtaaTTCCGTCATAGCGGGGAGCCTCCATTTGGAAATGATGATACACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCTTCAATCGTATGCGGtt < 1:3457679/137‑1 (MQ=255) gggAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACg < 2:3082846/110‑1 (MQ=255) ttCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCTTCAATCGTATGCGGttcttc > 1:3411432/1‑139 (MQ=255) ttCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCTTCAATCGTATGCGGttcttc < 2:3411432/139‑1 (MQ=255) ttCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCTTCAATCGTATGCGGTTCTTCg > 2:2638791/1‑140 (MQ=255) ttCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCTTCAATCGTATGCGGTTCTTCg > 2:869907/1‑140 (MQ=255) ttCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCTTCAATCGTATGCGGTTCTTCg > 2:3126933/1‑140 (MQ=255) ttCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCTTCAATCGTATGCGGTTCTTCg > 2:1267624/1‑140 (MQ=255) ttCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCTTCAATCGTATGCGGTTCTTCg > 2:1029141/1‑140 (MQ=255) tatCGGGGAGCCTCCCTTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCTTCAATCGTATGCGGTTCTTCGCCAATCGt > 2:2758226/1‑140 (MQ=255) tatCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCTTCAATCGTATGCGGTTCTTCGCCAATCGt > 2:4188471/1‑140 (MQ=255) tCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCTTCAATCGTATGCGGTTCTTCGCCAATCGTgg > 2:3885164/1‑140 (MQ=255) cGGGGAGACTCCTATTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCTTCAATCGTATGCGGTTCTTCGCCAATCGTGGc < 2:380630/140‑1 (MQ=255) gAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACg > 2:2959848/1‑90 (MQ=255) gAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCTTCAATCGTATGCGGTTCTTCGCCAATCGTGGCTGaa > 2:1087668/1‑140 (MQ=255) ccTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCTTCAATCGTATGCGGTTCTTCGCCAATCGTGGCTGAAATg < 2:3006707/140‑1 (MQ=255) ccTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCTTCAATCGTATGCGGTTCTTCGCCAATCGTGGCTGAAATg > 1:302181/1‑140 (MQ=255) ccTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCTTCAATCGTATGCGGTTCTTCGCCAATCGTGGCTGAAATg > 2:2052836/1‑140 (MQ=255) cTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCTTCAATCGTATGCGGTTCTTCGCCAATCGTGGc > 1:2219386/1‑132 (MQ=255) tCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCTTCAATCGTATGCGGTTCTTCGCCAATCGTGGCTGAAATGGt > 2:3443290/1‑140 (MQ=255) tCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCTTCAATCGTATGCGGTTCTTCGCCAATCGTGGCTGAAATGGt > 1:1360312/1‑140 (MQ=255) tCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCTTCAATCGTATGCGGTTCTTCGCCAATAGTGGCTGAAATGGt > 2:3743882/1‑140 (MQ=255) ggAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCTTCAATCGTATGCGGTTCTTCGCCAATCGTGGCTGAAATGGTATCgaga < 1:3087335/140‑1 (MQ=255) aaaTGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCTTCAATCGTATGCGGTTCTTCGCCAATCGTGGCTGAAATGGTATCGAGAcc < 1:1002317/140‑1 (MQ=255) aaaTGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCTTCAATCGTATGCGGTTCTTCGCCAATCGTGGCTGAAATGGTATCGAGAcc < 1:846709/140‑1 (MQ=255) tgatgaTAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCTTCAATCGTATGCGGTTCTTCGCCAATCGTGGCTGAAATGGTATCGAGACCCAc > 2:1658034/1‑140 (MQ=255) atgatAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCTTCAATCGTATGCGGTTCTTCGCCAATCGTGGCTGAAATGGTATCGAGACCCACCg > 2:1581983/1‑140 (MQ=255) | TTTCACAAAAATATCTCCCGGCATCTTGCCGACAAAATGCAATACTGCTCCGATGATAAGCAAAACAGCTCCAAGAATCATAATGATCTTAGGGAATTCAGTCATATCGGGGAGCCTCCATTTGGAAATGATGATAAACGGCCGGTGTCACGATCCTTCCCCGCGGCGTTCTTTGAATAAATCCGATTTGCAGGAGGTACGGTTCGTACACGTCTTCAATCGTATGCGGTTCTTCGCCAATCGTGGCTGAAATGGTATCGAGACCCACCGGGC > NZ_CP034943/2643883‑2644155 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |