| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,201,057 | C→G | 6.1% | L226V (CTG→GTG) | EO946_RS16570 → | spore germination protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,201,057 | 0 | C | G | 6.1% | 705.2 / 6.2 | 249 | L226V (CTG→GTG) | EO946_RS16570 | spore germination protein |
| Reads supporting (aligned to +/- strand): ref base C (105/121); new base G (17/2); total (125/124) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.35e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 249 total aligned reads displayed.
GAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGTCCTTTGAGCTCAAAGGACTATTCATTGAAAGGT > NZ_CP034943/3200925‑3201195 | gAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTATTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATTAAGAAAAATAAATAAACATTAAGATATGCGGCTGTCGGCTTTCTGATTca > 2:1222934/1‑139 (MQ=255)gAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTACATCTCGTTTTTAGGAAAGGAAGTGATTCTGTTTATTCCTGAACAAATGAATAAAAAGAAAAAAACAATCAGATATTCGGCTGTAGGCGTTATGAttac > 1:57245/1‑138 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATGGCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACCTATGAAGAAAAAGAAATACAAATTCAGATATGGGGCTGTGGGGTTTCTGATTGCGa > 2:1424482/1‑140 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATTAAGAAAAAGAAATAAACATTAAGATATTCGGCTGTCGGCTTTCTGATTCCGa > 2:2066608/1‑140 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTTTCGGCTTTATGATTACGa > 2:3406298/1‑140 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGa > 2:1989690/1‑140 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGa < 2:3603214/140‑1 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGa < 1:1386391/140‑1 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGa > 2:537964/1‑140 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTGTACATCTCTTTTTTAGGAAAGGAAGTGATGCTGTTTCTGGCTGAACATATGTAGAAAAACAAATACACATTCAGATATGCGGCTGTCGGGTTTCTGCTTGCgg > 1:1926119/1‑139 (MQ=255) aGGTCTTGGACCCATTGCTAACACTCTTACTGTCGTTTGGATCTGTTTTTTAGGTAAGGTCGTGATGCTGTTTGTTGCGGAACAGATGAAGCAAAAGAAATACAGATTCAGATATGCGGCTGTCGGCTGTGTGATTGCgg > 2:1264263/1‑139 (MQ=255) aGGTCGTGGACCCATTGCTAACTCTCTTACTGTCGGTTCCATCTCTTTTTGAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATAGGCGGCTGTCGGCTTTCTGATTCCGa < 2:4071047/140‑1 (MQ=255) cTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGattat < 2:337603/140‑1 (MQ=255) cTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGattat < 1:234351/140‑1 (MQ=255) tGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTATGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATAAAAAATAATATATGCGGCTGTCGGCTTTCTGATTGCGATTAttt > 1:2006279/1‑140 (MQ=255) gACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTta < 1:3393951/140‑1 (MQ=255) aCCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTtat < 2:1360676/140‑1 (MQ=255) aTTGCTAACTCTCTTACTGTCGTTTGCATCTGTTTTTTAGGAATTGAAGTGATGCTGTTTGTTACTGAACATATTAAGAAAAATAAATACAAAATCACATATGCGGCTGTAGGCTTTCTGATTCCGAATATTTTatatat > 1:3702920/1‑140 (MQ=255) aTTGCTAACTCTCTTACTGTCGTTTCCCACTATTTTTTTGGTATGGTAGTGATGCGTTTTCTTGCAAAACATATTAAAAAAAAAAAATAAACAATAACAAATTAGGCTGTCGCCTTTCTGAATGCCATTATTTTataaat > 1:1045634/1‑140 (MQ=255) aTTGCTAACTCTCTTACTGTCGTTTCCATCTGTTTTTTATGCATTGAAGTTATGCTGTTTGTTGCTGCACATATTAAGTAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTACGATTATTTTatatat > 1:3847749/1‑140 (MQ=255) aTTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTGCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTatatat > 2:1896754/1‑140 (MQ=255) aTTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTGGGCTTTGTGATTGCGATTATTTTatatat > 2:366037/1‑140 (MQ=255) aTTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAACTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTatatat > 2:2634407/1‑140 (MQ=255) ttGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATc < 2:3304496/140‑1 (MQ=255) ttGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATc < 2:3709500/140‑1 (MQ=255) ttGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATc < 2:709173/140‑1 (MQ=255) agacagaCTCTCTTACTGTCGTGTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATc < 2:2959620/134‑1 (MQ=255) aCTCTCTTACTGTCGTTTGCCTCTCTTTTTTTTGAATGGAACTGATGCTGTTTCTTCCTGAACAGATGAAGAAAAAGAAAAAAACAATCAGATATGCGGCTGTGGGCTTTCTGGTTGCGATTATTTTATATATACTGaaa > 1:279011/1‑138 (MQ=255) aCTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACa < 2:1963119/140‑1 (MQ=255) aCTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACa < 2:429550/140‑1 (MQ=255) ctctctTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGTTGCTGTTTCTTCCGGAACATATTAAGAAAAAGAAATACAAAATCAGATATGCGGCTGTCGGCGTTCTGATTCCGAGTATTTTATATATACTGACat > 1:3056239/1‑140 (MQ=255) ctctTACTGTCGTTTACATCTCTTTTTTATTAATGGAAGTGATGCTGTTTCTTCCTGAACTTATGATGAATAATATTTAAACTTTCATATATTCTGCTTTCGTGTTTTTTATTTTTATTATTTTTTATATCCTTAGatat < 2:825079/140‑1 (MQ=255) ctTACTGTCGTTTCCATCTCTTTTTTAGGAATTGAAGTGATGCTGTTTGTTCCTGAACATATGAAGAAAAAGAAATACACATTAAGATATGCGGCTGTGGGCGTTGTGATTGCGATTATTTTATATATACAGACATATGt > 1:2872299/1‑140 (MQ=255) tCGTTTCCATCTCTTTTTTAGGAATTGAAGTGATGCTGTTTCTTCCTGAACATAAGAAGAAAAAGAAATACACATTAAGATATGCGGCTGTCGGAGTTGTTATTCCCATTATTTTATATATCCTTAAATATGTAATAgtt > 2:3454700/1‑140 (MQ=255) tCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATTAAGAAAAAGAAATACACATTCAGATATTCGGCTGTCGGGTTTCTGATTCCGATTATTTTATATATCCTTACAAGTGTGATGgtt > 2:4160892/1‑140 (MQ=255) tCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTATTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTACGATTATTTTATATATACTGACATATGTCATCgtt > 2:941788/1‑140 (MQ=255) tCGTTTCCATCTCTTTTTTAGGAAAGGAAGTGATGCTGTTTGTTACTGAACAAATCAACAAAAATAAATAAACATTCAGATATGCGGCTGTCGGCGTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCggt > 2:2418040/1‑138 (MQ=255) tCGTTTCCATCGGTTTTTTAGGAATGGAAGTGATGCGGTTTCTTGCGGAACATATGAATAAAAAGAAATACAAATTCAGATATGCGGCTGTCGGCTTTGTGATTCCGATTATTTTATATATAATGACATATGTCATCgtt > 2:1501231/1‑140 (MQ=255) gTTTCCATCTCTTTTTTATGAATGGAACTGATGCTGTTTCTTCCTGAACAAATGAAGAAAAATAAATACACAATCAGATATGCGGCTGTGGGGTTTCTGATTCCGATTATTTTATATATCCTGACATATTTCAACgttgt > 2:1833236/1‑140 (MQ=255) gTTTCCAACTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTTATTCCCATTATTTTATATATCCTGACAAATTTCATAgtttt > 2:4000225/1‑138 (MQ=255) tttCCATCTCTATTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCgttgtt < 2:2301762/140‑1 (MQ=255) gttCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCgttgtt < 2:1517361/139‑1 (MQ=255) tttttAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGAc < 1:1014392/140‑1 (MQ=255) tttttAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGAc < 1:3243275/140‑1 (MQ=255) tttttAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGAc < 2:3702920/140‑1 (MQ=255) tttttAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGAc < 2:1045634/140‑1 (MQ=255) tttttAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGAc < 2:513182/140‑1 (MQ=255) aTGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGa > 1:4158677/1‑140 (MQ=255) aTGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGa < 1:3967635/140‑1 (MQ=255) aTGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGa > 1:4009141/1‑140 (MQ=255) aTGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAAc > 2:208806/1‑140 (MQ=255) tGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGAGTCTTTTATATATCCTGAGATATGTCATCGTTGTTGGGGCGTTGACCGCTCCCGAGGTGAAATCGCTg > 1:4015411/1‑140 (MQ=255) tttCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGat > 2:2539108/1‑140 (MQ=255) tcttcCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGatat > 2:3021020/1‑140 (MQ=255) tcttcCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGatat > 1:2277775/1‑140 (MQ=255) ttcCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTCTATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATgg < 2:3646022/140‑1 (MQ=255) ttcCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATgg < 2:2917545/140‑1 (MQ=255) ttcCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATgg < 1:631626/140‑1 (MQ=255) ttcCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATgg < 2:789023/140‑1 (MQ=255) tcCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGc < 2:3132849/140‑1 (MQ=255) ccTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGcc < 1:69668/140‑1 (MQ=255) ccTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGcc < 2:617250/140‑1 (MQ=255) ccTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGcc < 2:3084220/140‑1 (MQ=255) ccTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGcc < 1:3454700/140‑1 (MQ=255) catGAACATATGAAGAAAAATAAATACACATTCAGCTCTGCGGCTGTCGGCTTTCTGATTCCGATTATTGTCTATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGcc < 1:2476600/138‑1 (MQ=255) cTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCGGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCg > 2:1323865/1‑140 (MQ=255) aaCATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTCTATATCCTGACATATGTCATCGTTGTTGGGGCTTTGAc < 1:1238086/106‑1 (MQ=255) aaCATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACg > 1:2011830/1‑125 (MQ=255) cATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACtat < 1:1005468/140‑1 (MQ=255) cATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACtat < 1:2634407/140‑1 (MQ=255) atGAAGAAAAAGAAATTCACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTAGTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCGGAGCTGGCCGACTctatg > 1:2063628/1‑139 (MQ=255) atGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGa < 2:112036/133‑1 (MQ=255) atGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATAtc > 2:914107/1‑140 (MQ=255) atGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGGTGGGGCTTTGACCGCTCCCGAGGTGACATCGCGGCTCTGGCCGACtctagc > 2:2705909/1‑138 (MQ=255) atGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGGTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATAtc > 2:3240537/1‑140 (MQ=255) aagaaaaagaaaTACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGcc < 1:915159/128‑1 (MQ=255) aaaaagaaaTACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCtt < 2:2872269/140‑1 (MQ=255) aaagaaaTACACATTCAGATATGCGGCTGTCGGCTTTCTGTTTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTGTc > 1:2960722/1‑140 (MQ=255) aaagaaaTACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTc > 1:4236707/1‑140 (MQ=255) aaagaaaTACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTc < 2:3898141/140‑1 (MQ=255) aaagaaaTACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTc < 2:201247/140‑1 (MQ=255) aTACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGTCCt < 1:2073863/140‑1 (MQ=255) aTACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGTCCt < 1:1378247/140‑1 (MQ=255) acaTTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGTCCTTTGa < 1:1167288/140‑1 (MQ=255) aTTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGTCCTTTGAGc < 2:279011/140‑1 (MQ=255) tCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGTCCTTTGAGCTc > 1:2594111/1‑140 (MQ=255) ctgATTTGCGGCTGTCGGCTTTGTGATTCCGATTATTTTATATATCGTGACATTTGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCTGTCCTTTGAGCTCa < 1:517459/138‑1 (MQ=255) atGCGGCTGTCGGCTGTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGTCCTTTGAGCTCAAAGGa < 2:400935/140‑1 (MQ=255) gCGGCTGTCGGCTTTCTGATTCCGATTCTTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTCTATCTCTCTTTCAGTCCTTTGAGCTCAAAGGACt > 1:1540618/1‑140 (MQ=255) gCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAACACGCTGATATGGCCGACTAGATCTCTCTTGCAGTCCTTTGAGCTCAAAGGACt > 1:2797047/1‑140 (MQ=255) gCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGTCCTTTGAGCTCAAAGGACt > 1:1699121/1‑140 (MQ=255) gCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGTCCTTTGAGCTCAAAGGACt > 1:3654779/1‑140 (MQ=255) cggctgtcggctgtCTTATTCCGATTATTTTATATATCCTGACATAGGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAATCGCTGATCTGGCCGACTATATCTCTCTTTCAGTCCTTTGAGCTCAAAGGACtc > 1:327463/1‑139 (MQ=255) cTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGTCCTTTGAGCTCAAAGGACTATTc > 2:214318/1‑140 (MQ=255) cTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATAGGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGTCCTTTGAGCTCAAAGGACTAtgc > 1:896798/1‑138 (MQ=255) gTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGTCCTTTGAGCTCAAAGGACTATTCAt > 2:2586203/1‑140 (MQ=255) gTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGTCCTTTGAGCTCAAAGGACTATTCAt > 1:3119516/1‑140 (MQ=255) ggCTTTGTGTTTTCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGTGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATGTCTCTTTCAGTCCTTTGAGCTCAAAGGACTATTCATTGa < 1:182766/140‑1 (MQ=255) gCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGTCCTTTGAGCTCAAAGGACTATTCATTGaa < 2:172759/140‑1 (MQ=255) tCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGTCCTTTGAGCTCAAAGGACTATTCATTGAAAGGt > 1:2313806/1‑140 (MQ=255) | GAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCCCGAGGTGAAAACGCTGATATGGCCGACTATATCTCTCTTTCAGTCCTTTGAGCTCAAAGGACTATTCATTGAAAGGT > NZ_CP034943/3200925‑3201195 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |