| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 4,022,597 | G→T | 5.3% | V607F (GTT→TTT) | EO946_RS20675 → | thioredoxin domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 4,022,597 | 0 | G | T | 5.3% | 915.9 / 2.1 | 334 | V607F (GTT→TTT) | EO946_RS20675 | thioredoxin domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base G (171/128); new base T (3/32); total (174/160) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.39e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 339 total aligned reads displayed.
AGTCACAGGCGACTTATCACTCATTGAAAAAGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTGCAGCAGACTA > NZ_CP034943/4022458‑4022736 | gTCACAGGCGACTTATCACTCATTGAAAAAGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGt > 2:808320/1‑140 (MQ=255) gTCACAGGCGACTTATCACTCATTGAAAAAGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGt > 1:3928893/1‑140 (MQ=255) gACTTATCACTCATTGAAAAAGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTgg < 1:3799387/140‑1 (MQ=255) aCTTATCACTCATTGAAAAAGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCACAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGc > 1:558391/1‑140 (MQ=255) aCTTATCACTCATTGAAAAAGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGc > 1:350419/1‑140 (MQ=255) aCTTATCACTCATTGAAAAAGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGc > 1:210309/1‑140 (MQ=255) aCTTATCACTCATTGAAAAAGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGc > 1:3117541/1‑140 (MQ=255) aTTGAAAAAGCAGAAACGATGTTTTCTGTGTTCAAGCCGTATATCGAATCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAATGAAATCGTTATTTTTGGCAGAGCAGACGa > 1:246095/1‑140 (MQ=255) aTTGAAAAAGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGa > 2:2675077/1‑140 (MQ=255) aTTGAAAAAGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGa > 1:3724049/1‑140 (MQ=255) aTTGAAAAAGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGa > 1:252075/1‑140 (MQ=255) aTTGAAAAAGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTGTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGa > 2:1356240/1‑140 (MQ=255) aTTGAAAAAGCAGAAACGATGGTTTCTGTGTTCAAGCCGGATATCGACGCGTATCCGAGCGGCCATGCGTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCTTTATTTTTGGCAGCGCAGACGa > 2:571066/1‑140 (MQ=255) gAAAAAGCAGAAACGATGTTTTCTATGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATcc < 1:3605739/140‑1 (MQ=255) aaaGCAGCAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGAGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATccagc < 2:3605314/140‑1 (MQ=255) aaaGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAAGCGGTATTTTTGGCAGCGCAGACGATccagc < 1:1150776/140‑1 (MQ=255) aaaGCAGAAACGATGTTTTCTGTGTTCAAGACGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATccagc < 1:766363/140‑1 (MQ=255) aaaCGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGaaaa < 1:2680193/140‑1 (MQ=255) aaaCGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGaaaa < 1:1206335/140‑1 (MQ=255) aTGTTTTGTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTCTGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAAt < 1:2381108/140‑1 (MQ=255) tGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATc > 2:4014794/1‑140 (MQ=255) ttttCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATcac < 1:3428524/140‑1 (MQ=255) gtgtTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGc > 1:1450519/1‑140 (MQ=255) tgtTCAAGCCGGATATCTAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTTATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCa < 1:1309625/140‑1 (MQ=255) tgtTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCa < 1:4184358/140‑1 (MQ=255) aaGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCa > 2:1396348/1‑140 (MQ=255) aaGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCa > 2:3284144/1‑140 (MQ=255) aaGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCa > 2:2400046/1‑140 (MQ=255) aaGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACCGCACTTCa > 2:1958748/1‑140 (MQ=255) ccGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCaaaa < 2:526904/140‑1 (MQ=255) atatCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGcc > 2:2224450/1‑140 (MQ=255) cGAATCGTATCCGATCGGCGATTCTTTCTGTATGCAAATCGTTTTAAAGCATTTTATGCCTAAAAATGAAATCGTTATTTTTTGCAGCGCAGACGATCCAGGCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTa < 1:808320/140‑1 (MQ=255) cGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGaaaa > 2:2736179/1‑109 (MQ=255) cGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTa < 2:2898371/140‑1 (MQ=255) cGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCACCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTa < 1:2805957/140‑1 (MQ=255) tATCCGATCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCaa > 2:3011569/1‑140 (MQ=255) tATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCaa > 2:3069237/1‑140 (MQ=255) gCGGCCATGCTTTCTTTATGAAAAGCGTTTTAAAGAATGTTATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCCGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTcc < 2:671448/140‑1 (MQ=255) gCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAATCAAATCACCACTGCACTGCAAAAAGCCTTTAAGCCCAACGACTCCAtt > 1:948055/1‑140 (MQ=255) ccATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTa > 2:3395374/1‑122 (MQ=255) cATGCTTTCTTTATGCAAAGCTTTTTAAAGCATGTCATCCCAAAAAACCAAATCGTTATTTTTGGCAGCGCAGACGACCCACCCACAAAAAAAATCACCACTCCACTAAAAAAACCCTTTAACCCCCACGACTCCAtttt < 1:1569878/140‑1 (MQ=255) tGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAAt > 2:1308045/1‑93 (MQ=255) gtttgtttATGAAAAGCGTGTTAAAGAATGTGATGCCTAAAACGGAAATCGTTATTTTTGGCAGCGCAGACGATCCACCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTtggtg < 2:2207431/139‑1 (MQ=255) tttATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAACGGAAATCTTTATTTTTGGCAGCGCAGCCGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAACCCCTTTAAGCCCCACGACTCCATTTTGGTGGCaga < 2:606536/140‑1 (MQ=255) tttATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAATCCCAACGACTCCATTTTGGTGGCaga > 1:4030279/1‑140 (MQ=255) tttATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCaga > 2:1045235/1‑140 (MQ=255) tttATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCaga > 2:3199864/1‑140 (MQ=255) tttATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCaga > 2:3769535/1‑140 (MQ=255) tttATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTATGGTGGCaga > 2:1677929/1‑140 (MQ=255) ttgaTGCAAAGCGTGTTAAAGCATGTGATGCCTCAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCGAGAACACAAATCACCACTGCAGTGCAAGCCGCCGTTATGCCCAGCGGCTCACGTTTGGTGGgaga > 2:3480608/4‑140 (MQ=255) gtgaggCAACGCGTGTAAAAGCCTGTGAGGCACAAACAGGAAATCGTTTTTTTTGGCCGCGAAGTGGCGCCAGACACAAAACAAATCACCACGGCACTTCAAAAAGCCTTTAAGCCCAACGACGCCATTTTGGTGGCaga < 2:3160109/135‑1 (MQ=255) aTGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCa > 1:1767741/1‑140 (MQ=255) tGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCAt > 1:1520359/1‑140 (MQ=255) tGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCAt > 1:2673565/1‑140 (MQ=255) tcAAAGCGTGTTAAAGAATTTTATTCAAAAAAATTAAATCTTTATTTTTGGCAGCGCAGAAGATCCAGCCAGAAAAAAAATCACCACTGCAATTCAAAAAGCCTTTATGCCAATATAATACATTTTGGTGGCatagattc < 2:2873882/139‑5 (MQ=255) gCAAAGGTTGTAAAAGCATTTTATGCCTAAAAAGGAAATGGTTATTTTTGGCAGCGCAGACTATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATc < 2:2605356/140‑1 (MQ=255) gCAAAGCGTTTTAAAGCATGTTATGCCTAAAAAGCAAATCTTTATTTTTGGCAGCGCACACGATCCCGCCAGAAAACAAATCACCACTGCACTTAAAAAAGCATTTAACCCCAACGACTCCATTTTGGTGGCAGAGCATc < 1:670661/140‑1 (MQ=255) aaGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTg > 1:4078753/1‑140 (MQ=255) aaGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTg > 1:3033128/1‑140 (MQ=255) aaGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCATTTAAGCCCACCGACTCCAGTTTGGTGGCAGAGCATCCTg > 1:1875872/1‑140 (MQ=255) aGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGa > 2:1632757/1‑140 (MQ=255) aGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGa > 1:485029/1‑140 (MQ=255) aGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGa > 1:3224413/1‑140 (MQ=255) aGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGa > 1:2277794/1‑140 (MQ=255) aGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGa > 1:2648906/1‑140 (MQ=255) gCGTTTTAAAGCTTGTGATGCCTAAAAAGTAAATCGTTTTTTTTGGCAGCGCAGACGATCCAGCCAGAAAAAAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGAt < 1:2809776/140‑1 (MQ=255) gCGTGTTAACGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCAACAAAAAAAAACACCACTGCACTTAAAAAAGCCTTTAACCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGAt < 1:3871610/140‑1 (MQ=255) gCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCTTTATTTTTGGCAGCGCACACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCGTTAAGCCCAACGACTCCATTTTGTTGGCAGAGCATCCTGAt > 1:2299930/1‑140 (MQ=255) aggtgtTAAAGCATGTTATGCCTAAAAAGGAAATCGTTATTTTTGGAAGCGCATACGATCCAGCCATAAAACAAATCACCACTGCCCTTCAAAAAGAATTAAAGCCCTTCGACTAAATTTTGGTGGCATAGCATCGTGAt < 2:1221116/138‑1 (MQ=255) cGTGTTAACTCTTGTGATGCATAAAAAGGAAATGGTTATTTTTGGAAGCGCAGACTATCCAGCCAGAAAACAAATCACCACTCCACTTCAAAAAGCCTTTATGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATc < 2:4262021/140‑1 (MQ=255) gtTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTg < 2:2543457/80‑1 (MQ=255) gtTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAAt > 2:2156181/1‑140 (MQ=255) gtTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAAt > 2:1183263/1‑140 (MQ=255) aaaGAATGTTATTCATAAAAAGTAAATATTTATTTTTGTCAGCGCATACGATCCAGCCAGAAAACAAATCACCACTGAACTTAAAAAATCTTTTAAGACAAACGACTGCATTTTTTTGTCATAGCATAGTGATCGAttct < 2:3268736/140‑4 (MQ=255) aaGAATGTGATGCCTAAAAAGGAAATGGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAAAAAATCACCAGGGCACTTCAAAAACCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCaa < 1:1275095/140‑1 (MQ=255) aaGAATGTGATGCATAAAAAGTAAATCTTTATTTTTGGCAGCGCATACGATCCAGCAAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCaa < 1:3325550/140‑1 (MQ=255) gCATGTGATGCCTAAAAAGCAAATCGTTATTTTTGGCAGCCCACACTATCCAGCCACAAAAAAAATCACCACTCAACTTCAAAAAGCATTTAACCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAg < 1:1959109/140‑1 (MQ=255) cATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCaga > 1:3585931/1‑119 (MQ=255) tgtgATGCCTAAAAAGGAAATCGTTATTTTTGGCTGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAGACAGCCTGTACGCCCACCGACTCCTTGTTGGGGGCTGAGCATCGTGATCAATGCAAAGACa > 2:4202091/1‑140 (MQ=255) tgtgATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACa > 2:247433/1‑140 (MQ=255) tgtgATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACa > 1:2897108/1‑140 (MQ=255) tgtgATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACa > 1:2010036/1‑140 (MQ=255) tgtgATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACa > 2:2313064/1‑140 (MQ=255) tgATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAACAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCa < 2:4147208/113‑1 (MQ=255) tgATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCa < 2:730213/113‑1 (MQ=255) aggCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCCGCCAGAAAACAAATCACCACTGCACTTCAAAACGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGc < 2:2920651/138‑1 (MQ=255) aTGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGc < 2:1250817/140‑1 (MQ=255) aTGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAAAAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGc < 2:3873535/140‑1 (MQ=255) tGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCATAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCa < 2:409871/140‑1 (MQ=255) ccTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCAcc > 1:897344/1‑140 (MQ=255) tAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCATAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCt < 2:156820/140‑1 (MQ=255) aaaGGAAATCTTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAAAAAATCACCCCTGCACTTCAAAAAGCATTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTg < 1:4149745/140‑1 (MQ=255) ggAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTgcag < 2:3053570/140‑1 (MQ=255) ggAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAACCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTgcag < 2:2054785/140‑1 (MQ=255) ggAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGAACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTgcag < 2:3651528/140‑1 (MQ=255) ccaaaTCGTTATTTTTGGCAGCGCCTACGATCCCTCAAGAAAAAAACTAACCACGGCACTTCAAAAAGCCTTTAACCCCAACGAATCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTgcag < 2:3742160/138‑1 (MQ=255) acaTCGTTTTTTTTGGCAGCGCTGACGTGCCCGCCAGAACACAAATCACCACTGCACTTCAAAAACCCTTTACGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTgcagca < 1:3088173/138‑1 (MQ=255) aaTCTTTTTTTTTGGCAGCGCAGACGATCCAGCCAGAAAAAAAATAACCACTGCACTTCAAAACGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTGcagcag < 1:4220325/140‑1 (MQ=255) aTCGTAATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAAACACCACTGCACGTCAAAAAGCCTTAAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTATGCAGCAGa > 2:1860902/1‑140 (MQ=255) tCGTTATTTTTGGCAGCGCAGACTATCCACCCAGAAAACAAATCACCACTGCACTTCAAAACGCCTTTAACCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTGCAGCAGAc < 1:1027636/140‑1 (MQ=255) | AGTCACAGGCGACTTATCACTCATTGAAAAAGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTGCAGCAGACTA > NZ_CP034943/4022458‑4022736 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |