Fri Jun 15 20:07:57 2018

breseq -p -j 3 --polymorphism-frequency-cutoff 0.025 -r CP009273_1.gb -o A8_F017_R2_F16_I0 A8_F017_R2_F16_I0_S2189_L001_R2_001.good.fq.gz A8_F017_R2_F16_I0_S2189_L001_R1_001.good.fq.gz