Mon Jul 1 13:55:37 2019 /usr/bin/breseq-0.33.1-Linux-x86_64/bin/breseq --consensus-frequency-cutoff=0.75 --require-match-fraction=0.95 -p -j 1 -o breseq_processes/2 -r /var/data/W3110.gb /var/alemutpipe-outputs/good/J8-E2_S111_R1_001.good.fq