breseq  version 0.33.1  revision 8505477f25b3 mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutations
evidence	position	mutation	freq	annotation	gene	description
RA	6,332	C→A	9.4%	R17R (CGG→CGT)	trmE ←	GTPase
RA	6,339	T→A	5.8%	Q15L (CAG→CTG)	trmE ←	GTPase
RA	6,346	T→G	7.8%	T13P (ACG→CCG)	trmE ←	GTPase
RA	35,009	A→G	11.5%	intergenic (+27/+31)	czrSA → / ← PP_0031	metal‑sensor histidine kinase/hypothetical protein
RA	35,012	C→T	13.6%	intergenic (+30/+28)	czrSA → / ← PP_0031	metal‑sensor histidine kinase/hypothetical protein
RA	45,680	C→G	18.2%	intergenic (‑156/+47)	cadA‑I ← / ← PP_0042	cadmium translocating P‑type ATPase/hypothetical protein
RA	68,337	G→A	5.5%	intergenic (+25/+150)	PP_0057 → / ← PP_0058	major facilitator family transporter/1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	70,938	T→C	7.7%	T323A (ACC→GCC)	glyS ←	glycine‑tRNA ligase subunit beta
RA	74,159	A→T	7.3%	K212M (AAG→ATG)	PP_0063 →	lipid A biosynthesis lauroyl acyltransferase
RA	74,165	T→G	7.3%	V214G (GTG→GGG) ‡	PP_0063 →	lipid A biosynthesis lauroyl acyltransferase
RA	74,166	G→C	7.4%	V214V (GTG→GTC) ‡	PP_0063 →	lipid A biosynthesis lauroyl acyltransferase
RA	74,167	C→A	7.0%	P215T (CCG→ACG)	PP_0063 →	lipid A biosynthesis lauroyl acyltransferase
RA	74,173	A→T	8.3%	M217L (ATG→TTG)	PP_0063 →	lipid A biosynthesis lauroyl acyltransferase
RA	86,240	G→T	10.2%	L160M (CTG→ATG)	PP_0075 ←	choline sulfate transporter
RA	86,245	A→C	7.8%	M158R (ATG→AGG)	PP_0075 ←	choline sulfate transporter
RA	87,493	T→A	6.5%	N98I (AAT→ATT)	PP_0076 ←	choline betaine‑binding protein
RA	100,112	C→A	5.3%	G99G (GGG→GGT)	PP_0094 ←	5'‑nucleotidase
RA	100,116	T→G	5.1%	N98T (AAC→ACC) ‡	PP_0094 ←	5'‑nucleotidase
RA	100,117	T→G	5.1%	N98H (AAC→CAC) ‡	PP_0094 ←	5'‑nucleotidase
RA	101,802	A→C	5.9%	K208Q (AAG→CAG) ‡	prlC →	oligopeptidase A
RA	101,804	G→T	6.2%	K208N (AAG→AAT) ‡	prlC →	oligopeptidase A
RA	107,981:1	+G	6.9%	coding (460/642 nt)	PP_5426 ←	hypothetical protein
RA	107,990	Δ1 bp	7.0%	coding (451/642 nt)	PP_5426 ←	hypothetical protein
RA	109,427	T→C	9.5%	F206F (TTT→TTC)	PP_0103 →	cytochrome c oxidase subunit 2
RA	109,430	C→T	8.9%	V207V (GTC→GTT)	PP_0103 →	cytochrome c oxidase subunit 2
RA	109,431	A→G	8.9%	N208D (AAC→GAC)	PP_0103 →	cytochrome c oxidase subunit 2
RA	109,434	G→A	9.1%	E209K (GAA→AAA)	PP_0103 →	cytochrome c oxidase subunit 2
RA	133,201	T→C	7.2%	A208A (GCT→GCC)	dsbA →	thiol:disulfide interchange protein
RA	133,205	A→T	6.8%	K210* (AAG→TAG) ‡	dsbA →	thiol:disulfide interchange protein
RA	133,207	G→C	7.0%	K210N (AAG→AAC) ‡	dsbA →	thiol:disulfide interchange protein
RA	133,209	A→T	6.9%	*211L (TAG→TTG)	dsbA →	thiol:disulfide interchange protein
RA	137,602	G→A	8.9%	R168H (CGT→CAT)	PP_0131 →	membrane‑anchored phosphodiesterase
RA	147,479	A→G	14.3%	L204P (CTG→CCG)	PP_0139 ←	lipoprotein
RA	156,383	C→T	6.1%	intergenic (‑8/+35)	ygdQ ← / ← citN	transport protein/citrate transporter
RA	156,385	G→A	6.1%	intergenic (‑10/+33)	ygdQ ← / ← citN	transport protein/citrate transporter
RA	156,386	T→C	6.1%	intergenic (‑11/+32)	ygdQ ← / ← citN	transport protein/citrate transporter
RA	156,388	A→G	5.9%	intergenic (‑13/+30)	ygdQ ← / ← citN	transport protein/citrate transporter
RA	165,929	G→T	8.5%	A326A (GCC→GCA)	pntAA ←	pyridine nucleotide transhydrogenase subunit alpha
RA	165,932	A→C	8.3%	D325E (GAT→GAG)	pntAA ←	pyridine nucleotide transhydrogenase subunit alpha
RA	181,805	T→C	13.1%	intergenic (+19/‑87)	PP_r01 → / → PP_5SB	5S ribosomal RNA/5S ribosomal RNA
RA	181,811	C→T	11.8%	intergenic (+25/‑81)	PP_r01 → / → PP_5SB	5S ribosomal RNA/5S ribosomal RNA
RA	181,812	A→G	11.9%	intergenic (+26/‑80)	PP_r01 → / → PP_5SB	5S ribosomal RNA/5S ribosomal RNA
RA	181,818	G→A	11.3%	intergenic (+32/‑74)	PP_r01 → / → PP_5SB	5S ribosomal RNA/5S ribosomal RNA
RA	182,034	G→A	9.0%	intergenic (+23/+42)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	182,035	A→T	8.3%	intergenic (+24/+41)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	182,036	T→C	8.5%	intergenic (+25/+40)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	184,287	A→C	5.3%	H92Q (CAT→CAG)	PP_0160 ←	ferrioxamine receptor
RA	185,765	A→C	6.9%	V125G (GTA→GGA)	PP_0162 ←	ECF family RNA polymerase sigma‑70 factor
RA	195,559	C→A	27.3%	T355T (ACC→ACA)	PP_0168 →	putative surface adhesion protein
RA	195,628	C→T	10.8%	D378D (GAC→GAT)	PP_0168 →	putative surface adhesion protein
RA	195,629	A→G	10.6%	T379A (ACC→GCC)	PP_0168 →	putative surface adhesion protein
RA	195,634	C→T	44.7%	T380T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	195,724	A→G	10.9%	V410V (GTA→GTG)	PP_0168 →	putative surface adhesion protein
RA	195,732	A→C	5.9%	N413T (AAC→ACC)	PP_0168 →	putative surface adhesion protein
RA	196,306	T→C	18.9%	N604N (AAT→AAC)	PP_0168 →	putative surface adhesion protein
RA	196,327	A→C	23.9%	T611T (ACA→ACC)	PP_0168 →	putative surface adhesion protein
RA	196,351	C→G	29.4%	T619T (ACC→ACG)	PP_0168 →	putative surface adhesion protein
RA	196,390	T→C	33.0%	D632D (GAT→GAC)	PP_0168 →	putative surface adhesion protein
RA	196,795	G→C	13.2%	T767T (ACG→ACC)	PP_0168 →	putative surface adhesion protein
RA	196,879	G→A	24.2%	V795V (GTG→GTA)	PP_0168 →	putative surface adhesion protein
RA	197,032	C→T	6.8%	T846T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	197,089	T→C	14.5%	N865N (AAT→AAC)	PP_0168 →	putative surface adhesion protein
RA	197,185	C→T	5.3%	T897T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	197,551	C→G	8.1%	T1019T (ACC→ACG)	PP_0168 →	putative surface adhesion protein
RA	197,572	G→A	15.4%	K1026K (AAG→AAA)	PP_0168 →	putative surface adhesion protein
RA	197,590	T→C	21.3%	D1032D (GAT→GAC)	PP_0168 →	putative surface adhesion protein
RA	197,632	T→C	20.8%	T1046T (ACT→ACC)	PP_0168 →	putative surface adhesion protein
RA	197,695	G→C	15.2%	T1067T (ACG→ACC)	PP_0168 →	putative surface adhesion protein
RA	198,278	G→T	5.3%	E1262* (GAG→TAG) ‡	PP_0168 →	putative surface adhesion protein
RA	198,279	A→C	5.3%	E1262A (GAG→GCG) ‡	PP_0168 →	putative surface adhesion protein
RA	198,284	C→G	5.3%	L1264V (CTG→GTG)	PP_0168 →	putative surface adhesion protein
RA	204,738	C→G	44.2%	T3415S (ACC→AGC)	PP_0168 →	putative surface adhesion protein
RA	237,450	G→A	10.0%	D111N (GAT→AAT) ‡	algR →	alginate biosynthesis regulatory protein
RA	237,452	T→G	9.4%	D111E (GAT→GAG) ‡	algR →	alginate biosynthesis regulatory protein
RA	237,455	C→A	9.3%	A112A (GCC→GCA)	algR →	alginate biosynthesis regulatory protein
RA	237,457	T→C	9.4%	L113S (TTG→TCG)	algR →	alginate biosynthesis regulatory protein
RA	247,111	A→G	5.5%	N430S (AAC→AGC)	yheS →	ABC transporter ATP‑binding protein
RA	247,254	G→T	7.5%	G478C (GGT→TGT)	yheS →	ABC transporter ATP‑binding protein
RA	253,348	T→C	9.3%	intergenic (‑133/+38)	PP_0202 ← / ← PP_0203	CBS domain‑containing protein/dipeptidase
RA	253,356	C→T	9.8%	intergenic (‑141/+30)	PP_0202 ← / ← PP_0203	CBS domain‑containing protein/dipeptidase
RA	253,358	A→T	9.8%	intergenic (‑143/+28)	PP_0202 ← / ← PP_0203	CBS domain‑containing protein/dipeptidase
RA	253,359	A→T	9.8%	intergenic (‑144/+27)	PP_0202 ← / ← PP_0203	CBS domain‑containing protein/dipeptidase
RA	253,361	A→G	9.8%	intergenic (‑146/+25)	PP_0202 ← / ← PP_0203	CBS domain‑containing protein/dipeptidase
RA	253,369	G→A	7.9%	intergenic (‑154/+17)	PP_0202 ← / ← PP_0203	CBS domain‑containing protein/dipeptidase
RA	257,825	T→G	12.5%	L504R (CTG→CGG)	PP_0205 →	oxidoreductase
RA	257,828	T→A	12.5%	F505Y (TTC→TAC)	PP_0205 →	oxidoreductase
RA	257,830	C→A	12.9%	R506S (CGC→AGC)	PP_0205 →	oxidoreductase
RA	277,240	A→T	8.6%	intergenic (‑73/+24)	PP_0223 ← / ← PP_0224	DszC family monooxygenase/DszC family monooxygenase
RA	277,241	A→T	8.6%	intergenic (‑74/+23)	PP_0223 ← / ← PP_0224	DszC family monooxygenase/DszC family monooxygenase
RA	277,242	A→T	8.9%	intergenic (‑75/+22)	PP_0223 ← / ← PP_0224	DszC family monooxygenase/DszC family monooxygenase
RA	278,742:1	+A	100%	intergenic (‑237/+77)	PP_0224 ← / ← sctC	DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein
RA	282,578	A→T	8.3%	N10I (AAT→ATT)	betT‑II →	choline/carnitine/betaine transporter
RA	284,586	T→A	10.8%	intergenic (+33/+30)	betT‑II → / ← atsK	choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase
RA	284,587	T→A	11.1%	intergenic (+34/+29)	betT‑II → / ← atsK	choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase
RA	289,411	A→T	8.0%	E277V (GAG→GTG)	oprE →	outer‑membrane porin E
RA	289,942	C→A	5.5%	intergenic (+26/‑140)	oprE → / → PP_0235	outer‑membrane porin E/peroxidase
RA	289,944	G→C	6.1%	intergenic (+28/‑138)	oprE → / → PP_0235	outer‑membrane porin E/peroxidase
RA	289,946	T→G	5.8%	intergenic (+30/‑136)	oprE → / → PP_0235	outer‑membrane porin E/peroxidase
RA	294,971	T→C	7.4%	V125V (GTT→GTC)	ssuB →	aliphatic sulfonates ABC transporter ATP‑binding protein SsuB
RA	294,976	T→A	7.1%	L127Q (CTG→CAG)	ssuB →	aliphatic sulfonates ABC transporter ATP‑binding protein SsuB
RA	295,583	G→T	8.2%	L49L (CTG→CTT)	PP_0241 →	transporter
RA	306,344	A→G	6.3%	S87G (AGT→GGT)	hslO →	molecular chaperone HslO
RA	307,865:1	+C	100%	intergenic (+880/‑989)	hslO → / → PP_0254	molecular chaperone HslO/hypothetical protein
RA	308,738	C→T	8.9%	intergenic (+1753/‑116)	hslO → / → PP_0254	molecular chaperone HslO/hypothetical protein
RA	308,739	A→G	8.6%	intergenic (+1754/‑115)	hslO → / → PP_0254	molecular chaperone HslO/hypothetical protein
RA	313,967	C→G	5.2%	V192L (GTG→CTG)	yrfG ←	purine nucleotidase
RA	315,914	G→A	9.3%	S243S (TCG→TCA)	cysQ →	3'(2'),5'‑bisphosphate nucleotidase CysQ
RA	321,740	T→C	8.7%	intergenic (+27/+431)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	321,741	G→A	8.7%	intergenic (+28/+430)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	322,133	G→A	18.0%	intergenic (+420/+38)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	322,140	T→C	19.3%	intergenic (+427/+31)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	336,124:1	+T	100%	coding (209/237 nt)	PP_0278 →	hypothetical protein
RA	338,065	G→T	7.0%	A168A (GCC→GCA)	PP_0280 ←	amino acid ABC transporter permease
RA	338,068	A→C	7.0%	S167R (AGT→AGG)	PP_0280 ←	amino acid ABC transporter permease
RA	345,705	G→C	5.0%	A714G (GCC→GGC)	PP_0287 ←	hypothetical protein
RA	345,712	T→G	5.2%	K712Q (AAG→CAG)	PP_0287 ←	hypothetical protein
RA	353,067	A→G	100%	intergenic (+34/+84)	hisF → / ← cbcV	imidazole glycerol phosphate synthase subunit HisF/choline/betaine/carnitine ABC transporter ATP binding protein
RA	362,745	Δ1 bp	8.9%	coding (738/966 nt)	lcdH ←	L‑carnitine dehydrogenase
RA	362,755:1	+G	10.3%	coding (728/966 nt)	lcdH ←	L‑carnitine dehydrogenase
RA	372,644	A→C	6.8%	intergenic (+64/‑115)	dgcA → / → dgcB	dimethylglycine dehydrogenase subunit/dimethylglycine dehydrogenase subunit
RA	372,646	C→G	6.7%	intergenic (+66/‑113)	dgcA → / → dgcB	dimethylglycine dehydrogenase subunit/dimethylglycine dehydrogenase subunit
RA	372,649	T→A	7.0%	intergenic (+69/‑110)	dgcA → / → dgcB	dimethylglycine dehydrogenase subunit/dimethylglycine dehydrogenase subunit
RA	372,651	A→G	7.0%	intergenic (+71/‑108)	dgcA → / → dgcB	dimethylglycine dehydrogenase subunit/dimethylglycine dehydrogenase subunit
RA	372,657	C→G	6.7%	intergenic (+77/‑102)	dgcA → / → dgcB	dimethylglycine dehydrogenase subunit/dimethylglycine dehydrogenase subunit
RA	372,665	T→A	6.4%	intergenic (+85/‑94)	dgcA → / → dgcB	dimethylglycine dehydrogenase subunit/dimethylglycine dehydrogenase subunit
RA	372,668	C→G	6.7%	intergenic (+88/‑91)	dgcA → / → dgcB	dimethylglycine dehydrogenase subunit/dimethylglycine dehydrogenase subunit
RA	390,993	G→T	6.9%	G423C (GGT→TGT)	soxA →	sarcosine oxidase subunit alpha
RA	390,996	T→A	6.4%	Y424N (TAC→AAC)	soxA →	sarcosine oxidase subunit alpha
RA	401,924	A→G	5.8%	V201A (GTC→GCC)	PP_0335 ←	glutathione S‑transferase family protein
RA	401,935	C→T	8.3%	R197R (CGG→CGA)	PP_0335 ←	glutathione S‑transferase family protein
RA	404,727	G→A	9.7%	L444L (CTG→TTG)	PP_0337 ←	sensory box protein
RA	406,027	A→C	5.6%	R10R (CGT→CGG)	PP_0337 ←	sensory box protein
RA	406,031	C→G	5.4%	S9T (AGC→ACC)	PP_0337 ←	sensory box protein
RA	414,921	G→A	8.9%	A247T (GCC→ACC)	waaF →	ADP‑heptose:LPS heptosyltransferase II
RA	415,319	C→T	7.7%	P29P (CCC→CCT)	waaC →	ADP‑heptose‑‑LPS heptosyltransferase
RA	426,176	G→A	7.0%	G541G (GGC→GGT)	PP_0350 ←	ferrichrome‑iron receptor
RA	435,321	A→C	5.7%	intergenic (‑122/‑328)	glcB ← / → PP_0357	malate synthase G/ACT domain‑containing protein
RA	435,323	A→T	5.9%	intergenic (‑124/‑326)	glcB ← / → PP_0357	malate synthase G/ACT domain‑containing protein
RA	435,325	G→T	6.1%	intergenic (‑126/‑324)	glcB ← / → PP_0357	malate synthase G/ACT domain‑containing protein
RA	435,331	G→A	7.0%	intergenic (‑132/‑318)	glcB ← / → PP_0357	malate synthase G/ACT domain‑containing protein
RA	436,896	A→T	7.7%	L131Q (CTG→CAG)	PP_0358 ←	membrane protein
RA	436,899	C→A	7.7%	W130L (TGG→TTG)	PP_0358 ←	membrane protein
RA	436,902	T→G	7.0%	Q129P (CAA→CCA)	PP_0358 ←	membrane protein
RA	436,905	A→T	7.0%	L128Q (CTG→CAG)	PP_0358 ←	membrane protein
RA	447,148	Δ1 bp	7.0%	intergenic (+28/‑274)	PP_0368 → / → PP_0369	acyl‑CoA dehydrogenase/diguanylate cyclase
RA	447,152	T→G	6.8%	intergenic (+32/‑270)	PP_0368 → / → PP_0369	acyl‑CoA dehydrogenase/diguanylate cyclase
RA	447,159:1	+C	6.6%	intergenic (+39/‑263)	PP_0368 → / → PP_0369	acyl‑CoA dehydrogenase/diguanylate cyclase
RA	460,935	G→C	7.8%	P510P (CCC→CCG) ‡	pqqF ←	coenzyme PQQ synthesis protein F
RA	460,936	G→C	7.8%	P510R (CCC→CGC) ‡	pqqF ←	coenzyme PQQ synthesis protein F
RA	460,937	G→C	7.8%	P510A (CCC→GCC) ‡	pqqF ←	coenzyme PQQ synthesis protein F
RA	460,938	G→C	7.9%	I509M (ATC→ATG)	pqqF ←	coenzyme PQQ synthesis protein F
RA	471,066	T→C	7.6%	intergenic (‑110/+18)	PP_0386 ← / ← rpoD	sensory box protein/RNA polymerase sigma 70 factor
RA	471,067	G→A	7.7%	intergenic (‑111/+17)	PP_0386 ← / ← rpoD	sensory box protein/RNA polymerase sigma 70 factor
RA	478,983	C→G	10.5%	Q162H (CAG→CAC) ‡	cca ←	multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
RA	478,984	T→C	10.4%	Q162R (CAG→CGG) ‡	cca ←	multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
RA	478,986	G→C	10.4%	R161R (CGC→CGG) ‡	cca ←	multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
RA	478,988	G→A	10.3%	R161C (CGC→TGC) ‡	cca ←	multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
RA	478,989	C→G	10.4%	M160I (ATG→ATC)	cca ←	multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
RA	484,688	C→T	8.8%	intergenic (‑250/+33)	yeaG ← / ← glpE	protein kinase/thiosulfate sulfurtransferase GlpE
RA	484,692	G→C	9.0%	intergenic (‑254/+29)	yeaG ← / ← glpE	protein kinase/thiosulfate sulfurtransferase GlpE
RA	484,696	A→G	8.8%	intergenic (‑258/+25)	yeaG ← / ← glpE	protein kinase/thiosulfate sulfurtransferase GlpE
RA	494,996	C→T	7.0%	R253C (CGC→TGC)	djlA →	DnaJ‑like protein DjlA
RA	499,203	A→G	100%	intergenic (+47/‑249)	uhpA → / → PP_0411	two‑component system response regulator UhpA/polyamine ABC transporter ATP‑binding protein
RA	500,539	A→G	10.2%	H363R (CAC→CGC)	PP_0411 →	polyamine ABC transporter ATP‑binding protein
RA	500,543	C→G	10.0%	A364A (GCC→GCG)	PP_0411 →	polyamine ABC transporter ATP‑binding protein
RA	500,544	C→G	10.2%	R365G (CGC→GGC)	PP_0411 →	polyamine ABC transporter ATP‑binding protein
RA	500,548	C→T	10.2%	A366V (GCG→GTG)	PP_0411 →	polyamine ABC transporter ATP‑binding protein
RA	503,593	T→A	5.9%	F208L (TTT→TTA)	PP_0414 →	polyamine ABC transporter permease
RA	503,813	A→G	11.1%	intergenic (+16/‑135)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	503,825	Δ1 bp	11.8%	intergenic (+28/‑123)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	503,831	A→T	10.8%	intergenic (+34/‑117)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	503,837:1	+C	10.3%	intergenic (+40/‑111)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	511,638	C→T	7.0%	S204S (AGC→AGT)	trpC →	indole‑3‑glycerol phosphate synthase
RA	516,693	T→G	7.0%	E100A (GAA→GCA) ‡	PP_0429 ←	short‑chain dehydrogenase/reductase family oxidoreductase
RA	516,694	C→A	7.1%	E100* (GAA→TAA) ‡	PP_0429 ←	short‑chain dehydrogenase/reductase family oxidoreductase
RA	524,349	G→C	14.9%	intergenic (+216/‑600)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	524,352	G→C	13.1%	intergenic (+219/‑597)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	524,365	C→T	8.3%	intergenic (+232/‑584)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	535,044	C→A	7.8%	intergenic (+29/‑91)	nusG → / → rplK	transcription antipausing factor NusG/50S ribosomal protein L11
RA	535,046	T→A	8.2%	intergenic (+31/‑89)	nusG → / → rplK	transcription antipausing factor NusG/50S ribosomal protein L11
RA	535,047	G→C	7.9%	intergenic (+32/‑88)	nusG → / → rplK	transcription antipausing factor NusG/50S ribosomal protein L11
RA	535,048	T→A	8.2%	intergenic (+33/‑87)	nusG → / → rplK	transcription antipausing factor NusG/50S ribosomal protein L11
RA	535,050	T→G	9.4%	intergenic (+35/‑85)	nusG → / → rplK	transcription antipausing factor NusG/50S ribosomal protein L11
RA	545,981	A→C	7.4%	intergenic (+21/‑52)	rpoC → / → PP_mr08	DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA
RA	545,982	A→C	7.4%	intergenic (+22/‑51)	rpoC → / → PP_mr08	DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA
RA	545,986	T→C	7.1%	intergenic (+26/‑47)	rpoC → / → PP_mr08	DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA
RA	545,989	G→C	7.0%	intergenic (+29/‑44)	rpoC → / → PP_mr08	DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA
RA	545,990	G→C	7.0%	intergenic (+30/‑43)	rpoC → / → PP_mr08	DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA
RA	546,002	G→A	15.0%	intergenic (+42/‑31)	rpoC → / → PP_mr08	DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA
RA	546,007	G→T	15.3%	intergenic (+47/‑26)	rpoC → / → PP_mr08	DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA
RA	546,008	A→T	14.8%	intergenic (+48/‑25)	rpoC → / → PP_mr08	DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA
RA	546,009	A→C	13.2%	intergenic (+49/‑24)	rpoC → / → PP_mr08	DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA
RA	546,014	T→C	14.5%	intergenic (+54/‑19)	rpoC → / → PP_mr08	DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA
RA	554,152:1	+C	8.0%	coding (92/714 nt)	rpsC →	30S ribosomal protein S3
RA	554,157	Δ1 bp	7.8%	coding (97/714 nt)	rpsC →	30S ribosomal protein S3
RA	558,477	A→C	6.9%	E21D (GAA→GAC)	rplR →	50S ribosomal protein L18
RA	561,964	T→C	6.0%	V32A (GTG→GCG)	rpsK →	30S ribosomal protein S11
RA	566,620	C→T	7.4%	intergenic (+32/+41)	bfr‑I → / ← uvrA	bacterioferritin/uvrABC excinuclease protein A
RA	566,624	A→G	7.3%	intergenic (+36/+37)	bfr‑I → / ← uvrA	bacterioferritin/uvrABC excinuclease protein A
RA	566,625	T→A	7.3%	intergenic (+37/+36)	bfr‑I → / ← uvrA	bacterioferritin/uvrABC excinuclease protein A
RA	566,626	C→T	7.3%	intergenic (+38/+35)	bfr‑I → / ← uvrA	bacterioferritin/uvrABC excinuclease protein A
RA	566,630	A→G	7.1%	intergenic (+42/+31)	bfr‑I → / ← uvrA	bacterioferritin/uvrABC excinuclease protein A
RA	587,076	C→G	6.8%	P43R (CCG→CGG)	PP_0497 →	Cro/CI family transcriptional regulator
RA	590,703:1	+A	6.7%	coding (827/885 nt)	PP_0500 →	dTDP‑4‑rhamnose reductase‑like protein
RA	590,707	T→C	6.5%	R277R (CGT→CGC)	PP_0500 →	dTDP‑4‑rhamnose reductase‑like protein
RA	590,711	T→A	6.5%	W279R (TGG→AGG)	PP_0500 →	dTDP‑4‑rhamnose reductase‑like protein
RA	593,433	G→T	11.3%	E391* (GAG→TAG) ‡	PP_0503 →	MFS transporter
RA	593,434	A→C	11.8%	E391A (GAG→GCG) ‡	PP_0503 →	MFS transporter
RA	629,375	A→G	5.6%	S275P (TCG→CCG)	eutB ←	ethanolamine ammonia‑lyase subunit alpha
RA	646,272	T→A	9.5%	intergenic (‑178/‑106)	PP_0556 ← / → acoR	acetoin catabolism protein/acetoin catabolism regulatory protein
RA	648,287	A→C	15.4%	intergenic (+56/+35)	acoR → / ← accC	acetoin catabolism regulatory protein/acetyl‑CoA carboxylase biotin carboxylase subunit
RA	648,289	A→T	10.6%	intergenic (+58/+33)	acoR → / ← accC	acetoin catabolism regulatory protein/acetyl‑CoA carboxylase biotin carboxylase subunit
RA	648,291	G→T	9.0%	intergenic (+60/+31)	acoR → / ← accC	acetoin catabolism regulatory protein/acetyl‑CoA carboxylase biotin carboxylase subunit
RA	654,398	C→A	6.9%	L115L (CTG→CTT)	ctpL ←	methyl‑accepting chemotaxis protein CtpL
RA	654,403	T→G	5.9%	K114Q (AAG→CAG)	ctpL ←	methyl‑accepting chemotaxis protein CtpL
RA	675,587	A→T	12.5%	C38S (TGC→AGC)	PP_0577 ←	hypothetical protein
RA	675,589	C→G	13.6%	G37A (GGC→GCC)	PP_0577 ←	hypothetical protein
RA	675,591	A→T	13.8%	A36A (GCT→GCA)	PP_0577 ←	hypothetical protein
RA	697,225	C→G	12.3%	intergenic (+152/‑599)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,228	C→G	12.3%	intergenic (+155/‑596)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,239	G→A	10.8%	intergenic (+166/‑585)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	699,722	A→G	49.2%	intergenic (+115/‑129)	PP_t06 → / → PP_23SD	tRNA‑Ala/23S ribosomal RNA
RA	702,764	T→G	16.7%	intergenic (+12/‑120)	PP_23SD → / → PP_5SD	23S ribosomal RNA/5S ribosomal RNA
RA	702,765	A→T	15.9%	intergenic (+13/‑119)	PP_23SD → / → PP_5SD	23S ribosomal RNA/5S ribosomal RNA
RA	702,766	C→A	16.2%	intergenic (+14/‑118)	PP_23SD → / → PP_5SD	23S ribosomal RNA/5S ribosomal RNA
RA	704,281	A→C	6.2%	Q125P (CAG→CCG)	PP_5745 →	paraquat‑inducible protein A
RA	708,755	T→C	10.6%	I386T (ATC→ACC) ‡	murJ →	lipid II flippase
RA	708,756	C→T	11.1%	I386I (ATC→ATT) ‡	murJ →	lipid II flippase
RA	708,759	A→G	12.2%	A387A (GCA→GCG)	murJ →	lipid II flippase
RA	708,760	G→A	12.2%	V388I (GTC→ATC)	murJ →	lipid II flippase
RA	715,009:1	+T	6.8%	intergenic (+75/+2)	ispH → / ← PP_0607	4‑hydroxy‑3‑methylbut‑2‑enyl diphosphate reductase/type IV pili biogenesis protein FimT
RA	715,016	Δ1 bp	6.8%	coding (478/483 nt)	PP_0607 ←	type IV pili biogenesis protein FimT
RA	716,286	C→T	6.8%	Q169* (CAG→TAG)	PP_0609 →	hypothetical protein
RA	720,921	G→C	8.9%	T92S (ACC→AGC) ‡	PP_0614 ←	bifunctional N‑carbamoyl‑beta‑alanine amidohydrolase/allantoine amidohydrolase
RA	720,922	T→C	9.1%	T92A (ACC→GCC) ‡	PP_0614 ←	bifunctional N‑carbamoyl‑beta‑alanine amidohydrolase/allantoine amidohydrolase
RA	720,926	G→C	9.4%	I90M (ATC→ATG)	PP_0614 ←	bifunctional N‑carbamoyl‑beta‑alanine amidohydrolase/allantoine amidohydrolase
RA	720,930	G→A	8.4%	P89L (CCC→CTC) ‡	PP_0614 ←	bifunctional N‑carbamoyl‑beta‑alanine amidohydrolase/allantoine amidohydrolase
RA	720,931	G→C	8.5%	P89A (CCC→GCC) ‡	PP_0614 ←	bifunctional N‑carbamoyl‑beta‑alanine amidohydrolase/allantoine amidohydrolase
RA	723,207	T→C	7.4%	I188V (ATC→GTC)	PP_0617 ←	branched‑chain amino acid ABC transporter permease
RA	733,049	G→A	10.9%	intergenic (+24/‑339)	clpB → / → PP_t07	chaperone protein ClpB/tRNA‑Asn
RA	733,050	T→A	10.8%	intergenic (+25/‑338)	clpB → / → PP_t07	chaperone protein ClpB/tRNA‑Asn
RA	733,051	T→A	10.7%	intergenic (+26/‑337)	clpB → / → PP_t07	chaperone protein ClpB/tRNA‑Asn
RA	733,052	T→C	10.7%	intergenic (+27/‑336)	clpB → / → PP_t07	chaperone protein ClpB/tRNA‑Asn
RA	733,244	A→T	6.0%	intergenic (+219/‑144)	clpB → / → PP_t07	chaperone protein ClpB/tRNA‑Asn
RA	733,245	A→G	6.0%	intergenic (+220/‑143)	clpB → / → PP_t07	chaperone protein ClpB/tRNA‑Asn
RA	733,249	A→T	5.7%	intergenic (+224/‑139)	clpB → / → PP_t07	chaperone protein ClpB/tRNA‑Asn
RA	735,617	A→G	6.9%	intergenic (‑43/+90)	PP_0627 ← / ← PP_0628	hypothetical protein/hypothetical protein
RA	735,632	G→T	7.1%	intergenic (‑58/+75)	PP_0627 ← / ← PP_0628	hypothetical protein/hypothetical protein
RA	753,375	G→A	7.5%	intergenic (‑614/‑369)	PP_0641 ← / → PP_5452	hypothetical protein/hypothetical protein
RA	772,737	C→A	6.8%	H134N (CAT→AAT) ‡	PP_0664 →	homoserine dehydrogenase
RA	772,738	A→G	6.8%	H134R (CAT→CGT) ‡	PP_0664 →	homoserine dehydrogenase
RA	774,988	A→T	8.0%	N54Y (AAC→TAC)	PP_0666 →	hypothetical protein
RA	779,917	G→T	9.2%	A185D (GCC→GAC) ‡	PP_0670 ←	bile acid/Na+ symporter family transporter
RA	779,918	C→G	8.8%	A185P (GCC→CCC) ‡	PP_0670 ←	bile acid/Na+ symporter family transporter
RA	779,919	A→C	9.0%	G184G (GGT→GGG)	PP_0670 ←	bile acid/Na+ symporter family transporter
RA	780,556	A→C	11.3%	intergenic (‑86/+36)	PP_0670 ← / ← glyA‑II	bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase
RA	780,558	T→A	11.6%	intergenic (‑88/+34)	PP_0670 ← / ← glyA‑II	bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase
RA	780,560	G→T	12.2%	intergenic (‑90/+32)	PP_0670 ← / ← glyA‑II	bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase
RA	804,720	G→A	8.0%	D870D (GAC→GAT)	PP_0693 ←	hypothetical protein
RA	813,200	T→G	8.8%	intergenic (+107/+24)	PP_0699 → / ← PP_t70	LysE family transporter/tRNA‑Met
RA	813,201	T→C	8.8%	intergenic (+108/+23)	PP_0699 → / ← PP_t70	LysE family transporter/tRNA‑Met
RA	813,202	G→A	8.7%	intergenic (+109/+22)	PP_0699 → / ← PP_t70	LysE family transporter/tRNA‑Met
RA	813,203	C→A	8.8%	intergenic (+110/+21)	PP_0699 → / ← PP_t70	LysE family transporter/tRNA‑Met
RA	816,930	G→A	7.4%	P293P (CCG→CCA)	PP_0702 →	MFS transporter
RA	818,406	A→G	8.0%	A90A (GCT→GCC)	PP_0704 ←	ECF family RNA polymerase sigma‑70 factor
RA	821,679	G→C	9.5%	M350I (ATG→ATC)	PP_0707 →	hypothetical protein
RA	835,985	C→T	7.8%	A32T (GCC→ACC)	PP_0718 ←	sulfate transporter
RA	837,250	T→C	5.8%	T36A (ACC→GCC)	ychF ←	ribosome‑associated potassium‑dependent ATP/GTPase
RA	841,360	G→C	12.4%	L564V (CTC→GTC)	PP_0725 ←	TPR repeat‑containing protein
RA	841,361	G→C	12.1%	T563T (ACC→ACG) ‡	PP_0725 ←	TPR repeat‑containing protein
RA	841,362	G→C	12.0%	T563S (ACC→AGC) ‡	PP_0725 ←	TPR repeat‑containing protein
RA	852,159	A→T	6.9%	Q313L (CAG→CTG)	hemA →	glutamyl‑tRNA reductase
RA	852,164	G→C	7.5%	A315P (GCG→CCG) ‡	hemA →	glutamyl‑tRNA reductase
RA	852,165	C→G	7.5%	A315G (GCG→GGG) ‡	hemA →	glutamyl‑tRNA reductase
RA	852,166	G→C	7.5%	A315A (GCG→GCC) ‡	hemA →	glutamyl‑tRNA reductase
RA	852,171	A→T	7.2%	Q317L (CAG→CTG)	hemA →	glutamyl‑tRNA reductase
RA	860,698	G→A	11.7%	intergenic (‑27/+77)	PP_0741 ← / ← PP_0742	hypothetical protein/hypothetical protein
RA	860,699	T→A	11.3%	intergenic (‑28/+76)	PP_0741 ← / ← PP_0742	hypothetical protein/hypothetical protein
RA	860,701	A→T	11.3%	intergenic (‑30/+74)	PP_0741 ← / ← PP_0742	hypothetical protein/hypothetical protein
RA	860,702	C→T	11.5%	intergenic (‑31/+73)	PP_0741 ← / ← PP_0742	hypothetical protein/hypothetical protein
RA	860,707	A→G	11.1%	intergenic (‑36/+68)	PP_0741 ← / ← PP_0742	hypothetical protein/hypothetical protein
RA	860,708	A→T	10.8%	intergenic (‑37/+67)	PP_0741 ← / ← PP_0742	hypothetical protein/hypothetical protein
RA	860,710	T→A	11.3%	intergenic (‑39/+65)	PP_0741 ← / ← PP_0742	hypothetical protein/hypothetical protein
RA	860,711	T→C	11.3%	intergenic (‑40/+64)	PP_0741 ← / ← PP_0742	hypothetical protein/hypothetical protein
RA	875,283	A→C	5.8%	intergenic (+22/+24)	PP_0759 → / ← PP_0760	hypothetical protein/membrane protein
RA	875,284	T→A	6.4%	intergenic (+23/+23)	PP_0759 → / ← PP_0760	hypothetical protein/membrane protein
RA	875,285	G→T	7.4%	intergenic (+24/+22)	PP_0759 → / ← PP_0760	hypothetical protein/membrane protein
RA	900,535	C→G	11.1%	intergenic (+27/+18)	PP_0784 → / ← cysZ	hypothetical protein/sulfate transport protein CysZ
RA	902,621	G→T	10.1%	intergenic (+47/+29)	trxB → / ← nadC	thioredoxin reductase/quinolinate phosphoribosyltransferase
RA	904,934	Δ1 bp	6.6%	coding (1193/2160 nt)	PP_0788 →	hypothetical protein
RA	904,941:1	+G	6.9%	coding (1200/2160 nt)	PP_0788 →	hypothetical protein
RA	916,642	T→A	9.7%	I309F (ATT→TTT)	PP_0798 ←	GGDEF domain‑containing protein
RA	922,774	C→A	6.2%	R85L (CGC→CTC)	PP_0803 ←	protein secretion ABC transporter permease
RA	945,966	T→G	5.6%	E468A (GAA→GCA) ‡	norR ←	DNA‑binding transcriptional regulator
RA	945,967	C→A	5.7%	E468* (GAA→TAA) ‡	norR ←	DNA‑binding transcriptional regulator
RA	955,076	Δ1 bp	9.4%	intergenic (+30/‑283)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,080	T→A	9.1%	intergenic (+34/‑279)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,082:1	+G	9.5%	intergenic (+36/‑277)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,149	A→G	42.4%	intergenic (+103/‑210)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,151	G→A	43.8%	intergenic (+105/‑208)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,152	T→A	45.1%	intergenic (+106/‑207)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,153	T→C	45.2%	intergenic (+107/‑206)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,155	C→T	45.2%	intergenic (+109/‑204)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,186	A→G	36.4%	intergenic (+140/‑173)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,191:1	+G	16.7%	intergenic (+145/‑168)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	961,720	A→T	6.8%	L232Q (CTG→CAG)	selD ←	selenide, water dikinase
RA	962,364	A→G	5.7%	G17G (GGT→GGC)	selD ←	selenide, water dikinase
RA	964,014	T→G	5.3%	L208R (CTG→CGG)	phnC →	phosphonate ABC transporter ATP‑binding protein
RA	968,878	A→C	18.8%	intergenic (‑311/+20)	PP_0831 ← / ← PP_t68	hypothetical protein/tRNA‑Leu
RA	985,932	G→C	5.9%	E232Q (GAA→CAA)	pilF →	type IV pili biogenesis protein PilF
RA	985,937	G→C	5.9%	L233F (TTG→TTC)	pilF →	type IV pili biogenesis protein PilF
RA	989,021	C→A	7.5%	G291G (GGC→GGA)	hisS →	histidine‑‑tRNA ligase
RA	994,111	G→C	7.1%	R373P (CGT→CCT)	PP_0858 →	methionine/glutamine aminotransferase
RA	994,113	C→G	7.0%	Q374E (CAG→GAG) ‡	PP_0858 →	methionine/glutamine aminotransferase
RA	994,115	G→C	6.9%	Q374H (CAG→CAC) ‡	PP_0858 →	methionine/glutamine aminotransferase
RA	994,947	T→A	11.2%	intergenic (+26/+99)	PP_0859 → / ← PP_0860	ketoglutaramate omega‑amidase/sulfite reductase flavoprotein subunit
RA	994,948	T→A	11.0%	intergenic (+27/+98)	PP_0859 → / ← PP_0860	ketoglutaramate omega‑amidase/sulfite reductase flavoprotein subunit
RA	997,733	A→G	8.9%	intergenic (‑138/+94)	PP_0860 ← / ← PP_0861	sulfite reductase flavoprotein subunit/outer membrane ferric siderophore receptor
RA	997,747	A→G	8.6%	intergenic (‑152/+80)	PP_0860 ← / ← PP_0861	sulfite reductase flavoprotein subunit/outer membrane ferric siderophore receptor
RA	997,748	C→T	8.4%	intergenic (‑153/+79)	PP_0860 ← / ← PP_0861	sulfite reductase flavoprotein subunit/outer membrane ferric siderophore receptor
RA	997,749	C→T	8.4%	intergenic (‑154/+78)	PP_0860 ← / ← PP_0861	sulfite reductase flavoprotein subunit/outer membrane ferric siderophore receptor
RA	997,751	G→C	8.2%	intergenic (‑156/+76)	PP_0860 ← / ← PP_0861	sulfite reductase flavoprotein subunit/outer membrane ferric siderophore receptor
RA	997,753	A→G	8.0%	intergenic (‑158/+74)	PP_0860 ← / ← PP_0861	sulfite reductase flavoprotein subunit/outer membrane ferric siderophore receptor
RA	997,754	A→G	8.0%	intergenic (‑159/+73)	PP_0860 ← / ← PP_0861	sulfite reductase flavoprotein subunit/outer membrane ferric siderophore receptor
RA	997,755	C→T	7.9%	intergenic (‑160/+72)	PP_0860 ← / ← PP_0861	sulfite reductase flavoprotein subunit/outer membrane ferric siderophore receptor
RA	1,000,251	G→T	7.7%	intergenic (‑133/‑89)	PP_0861 ← / → PP_0862	outer membrane ferric siderophore receptor/PKHD‑type hydroxylase
RA	1,000,253:1	+G	5.3%	intergenic (‑135/‑87)	PP_0861 ← / → PP_0862	outer membrane ferric siderophore receptor/PKHD‑type hydroxylase
RA	1,000,258	Δ1 bp	5.5%	intergenic (‑140/‑82)	PP_0861 ← / → PP_0862	outer membrane ferric siderophore receptor/PKHD‑type hydroxylase
RA	1,000,261	A→C	5.5%	intergenic (‑143/‑79)	PP_0861 ← / → PP_0862	outer membrane ferric siderophore receptor/PKHD‑type hydroxylase
RA	1,001,071	G→A	8.7%	L16L (TTG→TTA)	PP_0863 →	hypothetical protein
RA	1,001,193	A→T	8.8%	Q57L (CAG→CTG)	PP_0863 →	hypothetical protein
RA	1,001,196	A→T	8.8%	Q58L (CAG→CTG)	PP_0863 →	hypothetical protein
RA	1,013,234	C→A	12.5%	intergenic (+62/+69)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,235	A→T	12.6%	intergenic (+63/+68)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,241	G→C	11.1%	intergenic (+69/+62)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,026,484	G→C	10.3%	L162V (CTG→GTG)	dppA‑II ←	dipeptide ABC transporter substrate‑binding protein
RA	1,026,485	G→C	10.4%	T161T (ACC→ACG) ‡	dppA‑II ←	dipeptide ABC transporter substrate‑binding protein
RA	1,026,486	G→C	10.4%	T161S (ACC→AGC) ‡	dppA‑II ←	dipeptide ABC transporter substrate‑binding protein
RA	1,027,996	G→C	7.4%	A248A (GCC→GCG)	dppA‑III ←	dipeptide ABC transporter substrate‑binding protein
RA	1,027,999	G→C	7.3%	D247E (GAC→GAG)	dppA‑III ←	dipeptide ABC transporter substrate‑binding protein
RA	1,031,919	T→A	6.2%	L5M (TTG→ATG) ‡	PP_0889 →	hypothetical protein
RA	1,031,920	T→A	6.1%	L5* (TTG→TAG) ‡	PP_0889 →	hypothetical protein
RA	1,040,591	A→T	8.0%	intergenic (+27/+15)	PP_0899 → / ← PP_0900	ferredoxin reductase/PAP2 family protein
RA	1,040,592	A→T	8.0%	intergenic (+28/+14)	PP_0899 → / ← PP_0900	ferredoxin reductase/PAP2 family protein
RA	1,040,593	A→T	8.0%	intergenic (+29/+13)	PP_0899 → / ← PP_0900	ferredoxin reductase/PAP2 family protein
RA	1,040,611	C→T	8.9%	A242T (GCA→ACA)	PP_0900 ←	PAP2 family protein
RA	1,045,265	T→C	8.6%	intergenic (+38/+68)	PP_0905 → / ← PP_0906	hypothetical protein/RND family multidrug transporter
RA	1,045,269	G→A	8.6%	intergenic (+42/+64)	PP_0905 → / ← PP_0906	hypothetical protein/RND family multidrug transporter
RA	1,048,985	G→T	6.2%	Y205* (TAC→TAA) ‡	PP_0907 ←	RND transporter membrane fusion protein‑like protein
RA	1,048,986	T→A	5.3%	Y205F (TAC→TTC) ‡	PP_0907 ←	RND transporter membrane fusion protein‑like protein
RA	1,052,166	T→A	6.6%	T401S (ACC→TCC)	PP_0910 ←	hypothetical protein
RA	1,058,532	Δ1 bp	5.6%	coding (356/597 nt)	sodB ←	superoxide dismutase
RA	1,070,246:1	+G	88.9%	intergenic (+46/+96)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,070,246:2	+A	88.9%	intergenic (+46/+96)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,070,260	G→C	13.8%	intergenic (+60/+82)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,070,263	G→C	13.8%	intergenic (+63/+79)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,071,037	G→C	7.7%	L117V (CTG→GTG)	PP_0928 ←	K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,071,038	G→C	8.9%	H116Q (CAC→CAG)	PP_0928 ←	K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,073,189	G→T	7.5%	A68A (GCC→GCA)	gatB ←	aspartyl/glutamyl‑tRNA(Asn/Gln) amidotransferase subunit B
RA	1,088,659	C→G	8.7%	intergenic (+155/‑99)	pmbA → / → PP_0943	regulatory protease/hypothetical protein
RA	1,088,661	T→G	8.4%	intergenic (+157/‑97)	pmbA → / → PP_0943	regulatory protease/hypothetical protein
RA	1,088,662	C→A	8.4%	intergenic (+158/‑96)	pmbA → / → PP_0943	regulatory protease/hypothetical protein
RA	1,088,664	C→G	8.1%	intergenic (+160/‑94)	pmbA → / → PP_0943	regulatory protease/hypothetical protein
RA	1,097,447	T→C	7.8%	S14G (AGC→GGC)	PP_0954 ←	hypothetical protein
RA	1,101,873	A→G	6.9%	K152E (AAG→GAG)	mlaD →	phospholipid ABC transporter substrate‑binding protein
RA	1,114,358	A→G	7.2%	V150A (GTC→GCC)	rlmF ←	ribosomal RNA large subunit methyltransferase F
RA	1,115,371	G→T	7.6%	L821M (CTG→ATG)	valS ←	valine‑‑tRNA ligase
RA	1,115,376	A→C	7.6%	L819R (CTG→CGG) ‡	valS ←	valine‑‑tRNA ligase
RA	1,115,377	G→C	7.4%	L819V (CTG→GTG) ‡	valS ←	valine‑‑tRNA ligase
RA	1,115,382	T→A	6.7%	K817M (AAG→ATG) ‡	valS ←	valine‑‑tRNA ligase
RA	1,115,383	T→A	7.0%	K817* (AAG→TAG) ‡	valS ←	valine‑‑tRNA ligase
RA	1,115,388	G→C	5.9%	P815R (CCC→CGC)	valS ←	valine‑‑tRNA ligase
RA	1,115,394	A→C	6.0%	I813S (ATC→AGC)	valS ←	valine‑‑tRNA ligase
RA	1,121,436	T→G	8.1%	S293A (TCG→GCG)	PP_0982 →	YjgP/YjgQ family permease
RA	1,121,444	C→T	8.9%	V295V (GTC→GTT)	PP_0982 →	YjgP/YjgQ family permease
RA	1,121,445	A→G	8.9%	N296D (AAC→GAC)	PP_0982 →	YjgP/YjgQ family permease
RA	1,121,453	C→A	8.8%	R298R (CGC→CGA)	PP_0982 →	YjgP/YjgQ family permease
RA	1,122,760	A→G	6.3%	intergenic (+31/+116)	PP_0983 → / ← PP_0984	membrane protein/membrane protein
RA	1,126,645:1	+C	100%	intergenic (‑99/+50)	tdcG‑II ← / ← gcvP‑I	L‑serine dehydratase/glycine dehydrogenase
RA	1,130,139	C→G	7.8%	intergenic (‑194/+110)	gcvH‑I ← / ← PP_0990	glycine cleavage system protein H/DoxX family protein
RA	1,145,433	C→T	14.2%	intergenic (‑100/+41)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,440	G→A	16.0%	intergenic (‑107/+34)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,441	T→C	16.1%	intergenic (‑108/+33)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,448	A→G	17.4%	intergenic (‑115/+26)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,149,461	C→T	7.8%	S98N (AGC→AAC)	PP_1008 ←	RNA polymerase subunit sigma‑24
RA	1,150,057	T→C	5.6%	S319G (AGC→GGC)	gapA ←	glyceraldehyde‑3‑phosphate dehydrogenase
RA	1,168,700	A→G	7.0%	intergenic (+217/+36)	eda → / ← leuA	KHG/KDPG aldolase/2‑isopropylmalate synthase
RA	1,168,701	A→T	7.0%	intergenic (+218/+35)	eda → / ← leuA	KHG/KDPG aldolase/2‑isopropylmalate synthase
RA	1,168,702	A→T	7.0%	intergenic (+219/+34)	eda → / ← leuA	KHG/KDPG aldolase/2‑isopropylmalate synthase
RA	1,169,305	T→C	7.6%	I369V (ATC→GTC)	leuA ←	2‑isopropylmalate synthase
RA	1,169,306	G→A	8.0%	D368D (GAC→GAT)	leuA ←	2‑isopropylmalate synthase
RA	1,171,608	T→G	9.5%	Q21P (CAG→CCG)	PP_1026 ←	M23/M37 family peptidase
RA	1,171,609:1	+C	9.5%	coding (61/828 nt)	PP_1026 ←	M23/M37 family peptidase
RA	1,171,616	Δ1 bp	9.3%	coding (54/828 nt)	PP_1026 ←	M23/M37 family peptidase
RA	1,171,618	C→A	9.1%	G18C (GGC→TGC)	PP_1026 ←	M23/M37 family peptidase
RA	1,177,553	A→C	7.3%	K146Q (AAG→CAG) ‡	guaA →	glutamine‑hydrolyzing GMP synthase
RA	1,177,554	A→T	7.3%	K146M (AAG→ATG) ‡	guaA →	glutamine‑hydrolyzing GMP synthase
RA	1,177,555	G→T	7.2%	K146N (AAG→AAT) ‡	guaA →	glutamine‑hydrolyzing GMP synthase
RA	1,178,751	T→A	6.9%	intergenic (+56/+38)	guaA → / ← PP_1033	glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein
RA	1,178,752	G→T	6.8%	intergenic (+57/+37)	guaA → / ← PP_1033	glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein
RA	1,178,753	A→C	6.8%	intergenic (+58/+36)	guaA → / ← PP_1033	glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein
RA	1,178,754	T→A	6.8%	intergenic (+59/+35)	guaA → / ← PP_1033	glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein
RA	1,184,612	A→T	8.9%	intergenic (‑228/‑184)	mltF ← / → purL	membrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase
RA	1,193,304	T→C	6.2%	N116D (AAC→GAC)	upxB ←	phosphatase
RA	1,194,976	A→G	7.1%	Q372R (CAG→CGG)	uxpA →	lipoprotein UxpA
RA	1,202,854	A→C	6.1%	Q228P (CAG→CCG)	xcpY →	type II secretion pathway protein XcpY
RA	1,202,857	G→T	5.8%	R229L (CGG→CTG)	xcpY →	type II secretion pathway protein XcpY
RA	1,232,572	T→C	6.8%	K47K (AAA→AAG)	glpD ←	aerobic glycerol‑3‑phosphate dehydrogenase
RA	1,235,074	G→A	8.0%	A71V (GCG→GTG)	glpK ←	glycerol kinase
RA	1,243,059	A→C	6.8%	intergenic (‑175/‑50)	PP_1083 ← / → tsaA	(2Fe‑2S)‑binding protein/peroxiredoxin
RA	1,243,062	C→A	7.4%	intergenic (‑178/‑47)	PP_1083 ← / → tsaA	(2Fe‑2S)‑binding protein/peroxiredoxin
RA	1,243,064	C→G	7.4%	intergenic (‑180/‑45)	PP_1083 ← / → tsaA	(2Fe‑2S)‑binding protein/peroxiredoxin
RA	1,243,066	T→G	7.1%	intergenic (‑182/‑43)	PP_1083 ← / → tsaA	(2Fe‑2S)‑binding protein/peroxiredoxin
RA	1,243,069	G→T	6.9%	intergenic (‑185/‑40)	PP_1083 ← / → tsaA	(2Fe‑2S)‑binding protein/peroxiredoxin
RA	1,243,725	G→A	10.8%	intergenic (+14/+85)	tsaA → / ← rnt	peroxiredoxin/ribonuclease T
RA	1,243,738	T→A	13.8%	intergenic (+27/+72)	tsaA → / ← rnt	peroxiredoxin/ribonuclease T
RA	1,243,739	T→C	14.0%	intergenic (+28/+71)	tsaA → / ← rnt	peroxiredoxin/ribonuclease T
RA	1,243,740	C→G	13.8%	intergenic (+29/+70)	tsaA → / ← rnt	peroxiredoxin/ribonuclease T
RA	1,243,741	G→A	13.7%	intergenic (+30/+69)	tsaA → / ← rnt	peroxiredoxin/ribonuclease T
RA	1,243,742	T→A	13.4%	intergenic (+31/+68)	tsaA → / ← rnt	peroxiredoxin/ribonuclease T
RA	1,243,755	T→C	7.5%	intergenic (+44/+55)	tsaA → / ← rnt	peroxiredoxin/ribonuclease T
RA	1,244,394	G→A	6.4%	P31S (CCG→TCG)	rnt ←	ribonuclease T
RA	1,252,396	T→C	6.8%	P138P (CCA→CCG)	PP_1095 ←	electron transport complex protein
RA	1,253,429	G→C	11.8%	intergenic (‑75/+32)	PP_1096 ← / ← metG	electron transport complex protein/methionine‑‑tRNA ligase
RA	1,253,431	A→T	10.0%	intergenic (‑77/+30)	PP_1096 ← / ← metG	electron transport complex protein/methionine‑‑tRNA ligase
RA	1,253,433	G→C	10.0%	intergenic (‑79/+28)	PP_1096 ← / ← metG	electron transport complex protein/methionine‑‑tRNA ligase
RA	1,273,323	C→T	6.6%	intergenic (+114/+54)	PP_1113 → / ← PP_1114	pyridoxal‑phosphate dependent enzyme family protein/SEC‑C domain‑containing protein
RA	1,273,339	G→T	5.7%	intergenic (+130/+38)	PP_1113 → / ← PP_1114	pyridoxal‑phosphate dependent enzyme family protein/SEC‑C domain‑containing protein
RA	1,273,341	T→C	5.7%	intergenic (+132/+36)	PP_1113 → / ← PP_1114	pyridoxal‑phosphate dependent enzyme family protein/SEC‑C domain‑containing protein
RA	1,278,938	A→G	9.1%	F353S (TTC→TCC)	PP_1117 ←	hypothetical protein
RA	1,291,564	T→A	7.3%	L119M (TTG→ATG) ‡	estC →	carboxylesterase
RA	1,291,565	T→A	7.3%	L119* (TTG→TAG) ‡	estC →	carboxylesterase
RA	1,307,440	C→G	6.0%	G60R (GGC→CGC)	livK ←	branched‑chain amino acids ABC transporter substrate‑binding protein
RA	1,307,441	C→G	6.1%	A59A (GCG→GCC)	livK ←	branched‑chain amino acids ABC transporter substrate‑binding protein
RA	1,321,977	C→G	10.7%	G252R (GGG→CGG)	PP_1154 ←	sensory box protein
RA	1,321,978	C→G	10.6%	P251P (CCG→CCC)	PP_1154 ←	sensory box protein
RA	1,327,121	C→T	40.5%	intergenic (+97/‑196)	PP_16SE → / → PP_23SE	16S ribosomal RNA/23S ribosomal RNA
RA	1,332,475	A→G	11.4%	intergenic (+56/‑1200)	PP_1157 → / → PP_1159	acetolactate synthase/membrane protein
RA	1,344,108	G→C	7.1%	A10G (GCC→GGC)	PP_1168 ←	TRAP dicarboxylate transporter subunit DctQ
RA	1,344,115	A→C	7.3%	C8G (TGC→GGC)	PP_1168 ←	TRAP dicarboxylate transporter subunit DctQ
RA	1,355,469	Δ1 bp	5.3%	intergenic (‑93/‑1)	nrdA ← / → PP_1180	ribonucleoside‑diphosphate reductase subunit alpha/hypothetical protein
RA	1,355,474:1	+T	5.6%	coding (5/264 nt)	PP_1180 →	hypothetical protein
RA	1,364,765	G→T	8.4%	intergenic (+135/+14)	dctA‑I → / ← PP_1189	C4‑dicarboxylate transport protein/hypothetical protein
RA	1,364,766	A→T	8.8%	intergenic (+136/+13)	dctA‑I → / ← PP_1189	C4‑dicarboxylate transport protein/hypothetical protein
RA	1,364,767	A→C	7.0%	intergenic (+137/+12)	dctA‑I → / ← PP_1189	C4‑dicarboxylate transport protein/hypothetical protein
RA	1,366,229	T→C	5.5%	E157E (GAA→GAG) ‡	PP_1191 ←	S4 domain‑containing protein
RA	1,366,231	C→G	5.7%	E157Q (GAA→CAA) ‡	PP_1191 ←	S4 domain‑containing protein
RA	1,366,232	C→G	5.7%	L156L (CTG→CTC)	PP_1191 ←	S4 domain‑containing protein
RA	1,366,548	T→G	7.7%	E51A (GAG→GCG)	PP_1191 ←	S4 domain‑containing protein
RA	1,366,551	A→T	8.1%	V50D (GTC→GAC)	PP_1191 ←	S4 domain‑containing protein
RA	1,366,554	C→A	7.5%	R49L (CGC→CTC)	PP_1191 ←	S4 domain‑containing protein
RA	1,368,196	A→G	9.7%	intergenic (+25/‑158)	PP_1193 → / → PP_1194	membrane protein/hypothetical protein
RA	1,368,197	G→T	9.3%	intergenic (+26/‑157)	PP_1193 → / → PP_1194	membrane protein/hypothetical protein
RA	1,368,199	G→C	9.8%	intergenic (+28/‑155)	PP_1193 → / → PP_1194	membrane protein/hypothetical protein
RA	1,368,201	A→C	9.3%	intergenic (+30/‑153)	PP_1193 → / → PP_1194	membrane protein/hypothetical protein
RA	1,368,202	C→T	9.3%	intergenic (+31/‑152)	PP_1193 → / → PP_1194	membrane protein/hypothetical protein
RA	1,383,461	G→A	7.7%	L524L (CTG→TTG)	proS ←	proline‑‑tRNA ligase
RA	1,388,037	G→T	7.6%	G151G (GGC→GGA)	PP_1209 ←	cold‑shock protein
RA	1,392,066	A→G	8.3%	intergenic (+97/‑18)	aspS → / → PP_1214	aspartate‑‑tRNA ligase/transcriptional regulator
RA	1,399,900	T→A	5.5%	L126Q (CTG→CAG)	oprL →	peptidoglycan‑associated lipoprotein
RA	1,403,590	G→A	13.6%	intergenic (‑56/+25)	PP_1227 ← / ← PP_1228	membrane protein/methyl‑accepting chemotaxis transducer
RA	1,403,591	T→C	13.6%	intergenic (‑57/+24)	PP_1227 ← / ← PP_1228	membrane protein/methyl‑accepting chemotaxis transducer
RA	1,408,944	G→A	9.7%	S466N (AGC→AAC)	PP_1230 →	hypothetical protein
RA	1,412,258	G→A	6.3%	E68K (GAG→AAG)	tusA‑I →	sulfurtransferase
RA	1,416,862	G→A	10.7%	R37Q (CGG→CAG)	PP_1239 →	metallo‑beta‑lactamase family protein
RA	1,416,868	T→A	10.7%	L39Q (CTG→CAG)	PP_1239 →	metallo‑beta‑lactamase family protein
RA	1,416,874	T→C	9.4%	L41P (CTG→CCG)	PP_1239 →	metallo‑beta‑lactamase family protein
RA	1,419,548:1	+C	100%	intergenic (‑37/+99)	PP_1242 ← / ← PP_1244	hypothetical protein/hypothetical protein
RA	1,419,550	T→C	15.9%	intergenic (‑39/+97)	PP_1242 ← / ← PP_1244	hypothetical protein/hypothetical protein
RA	1,419,551	C→T	16.0%	intergenic (‑40/+96)	PP_1242 ← / ← PP_1244	hypothetical protein/hypothetical protein
RA	1,436,151	A→G	6.5%	Y305H (TAT→CAT)	PP_1257 ←	1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase
RA	1,439,968	A→G	9.7%	intergenic (‑299/‑360)	yveA ← / → PP_1260	aspartate‑proton symporter/transposase
RA	1,456,130	T→C	6.4%	intergenic (+209/+40)	PP_1273 → / ← PP_1274	multidrug MFS transporter outer membrane protein/short‑chain dehydrogenase/reductase family oxidoreductase
RA	1,495,650	G→A	13.7%	A27T (GCC→ACC)	mdeA →	methionine gamma‑lyase
RA	1,495,653	C→A	13.0%	L28M (CTG→ATG) ‡	mdeA →	methionine gamma‑lyase
RA	1,495,654	T→G	13.0%	L28R (CTG→CGG) ‡	mdeA →	methionine gamma‑lyase
RA	1,495,657	T→C	12.7%	V29A (GTG→GCG)	mdeA →	methionine gamma‑lyase
RA	1,499,480	2 bp→AC	100%	intergenic (+57/‑106)	trpS → / → zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
RA	1,499,498	1 bp→CG	100%	intergenic (+75/‑89)	trpS → / → zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
RA	1,499,506:1	+C	100%	intergenic (+83/‑81)	trpS → / → zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
RA	1,504,067	T→A	20.1%	intergenic (+34/‑229)	rpsI → / → petA	30S ribosomal protein S9/ubiquinol‑cytochrome c reductase iron‑sulfur subunit
RA	1,504,068	T→A	20.0%	intergenic (+35/‑228)	rpsI → / → petA	30S ribosomal protein S9/ubiquinol‑cytochrome c reductase iron‑sulfur subunit
RA	1,521,246	T→G	8.7%	F168C (TTC→TGC) ‡	murD →	UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
RA	1,521,247	C→G	9.1%	F168L (TTC→TTG) ‡	murD →	UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
RA	1,521,248	C→A	9.1%	Q169K (CAG→AAG)	murD →	UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
RA	1,528,705	T→C	5.9%	V349A (GTA→GCA)	ftsA →	cell division protein FtsA
RA	1,534,879	G→A	7.5%	intergenic (+70/‑113)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,881	T→G	7.5%	intergenic (+72/‑111)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,883	C→T	7.9%	intergenic (+74/‑109)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,889	T→C	9.4%	intergenic (+80/‑103)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,893	C→T	9.8%	intergenic (+84/‑99)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,898	A→G	9.8%	intergenic (+89/‑94)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,902	G→A	10.0%	intergenic (+93/‑90)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,542,895	G→A	6.4%	T225T (ACG→ACA)	PP_1353 →	membrane protein
RA	1,544,617	G→C	10.6%	H496D (CAT→GAT)	ampG ←	muropeptide permease AmpG
RA	1,544,618	C→G	10.9%	W495C (TGG→TGC) ‡	ampG ←	muropeptide permease AmpG
RA	1,544,620	A→C	10.1%	W495G (TGG→GGG) ‡	ampG ←	muropeptide permease AmpG
RA	1,544,627	G→T	11.5%	A492A (GCC→GCA)	ampG ←	muropeptide permease AmpG
RA	1,555,388	A→C	11.3%	intergenic (+26/+48)	sbcB → / ← PP_1366	exodeoxyribonuclease I/transcriptional regulator MvaT
RA	1,555,389	T→A	11.3%	intergenic (+27/+47)	sbcB → / ← PP_1366	exodeoxyribonuclease I/transcriptional regulator MvaT
RA	1,555,390	G→T	11.6%	intergenic (+28/+46)	sbcB → / ← PP_1366	exodeoxyribonuclease I/transcriptional regulator MvaT
RA	1,557,009	A→T	8.1%	intergenic (+61/‑32)	purU‑II → / → PP_5468	formyltetrahydrofolate hydrolase/hypothetical protein
RA	1,557,010	G→C	8.2%	intergenic (+62/‑31)	purU‑II → / → PP_5468	formyltetrahydrofolate hydrolase/hypothetical protein
RA	1,557,011	A→T	8.2%	intergenic (+63/‑30)	purU‑II → / → PP_5468	formyltetrahydrofolate hydrolase/hypothetical protein
RA	1,562,169	T→G	16.1%	intergenic (‑79/‑90)	pctA ← / → PP_1372	methyl‑accepting chemotaxis protein PctA/hypothetical protein
RA	1,562,170	C→G	15.4%	intergenic (‑80/‑89)	pctA ← / → PP_1372	methyl‑accepting chemotaxis protein PctA/hypothetical protein
RA	1,562,171	C→A	15.5%	intergenic (‑81/‑88)	pctA ← / → PP_1372	methyl‑accepting chemotaxis protein PctA/hypothetical protein
RA	1,564,931	A→T	7.9%	L133Q (CTG→CAG)	pitB ←	phosphate transporter
RA	1,568,909	C→T	8.2%	intergenic (+46/‑281)	pcaK → / → pcaF‑I	4‑hydroxybenzoate transporter/beta‑ketoadipyl‑CoA thiolase
RA	1,568,912	A→G	7.7%	intergenic (+49/‑278)	pcaK → / → pcaF‑I	4‑hydroxybenzoate transporter/beta‑ketoadipyl‑CoA thiolase
RA	1,568,915	G→A	8.0%	intergenic (+52/‑275)	pcaK → / → pcaF‑I	4‑hydroxybenzoate transporter/beta‑ketoadipyl‑CoA thiolase
RA	1,578,350	A→G	8.1%	I1016T (ATC→ACC)	ttgB ←	efflux pump membrane protein TtgB
RA	1,585,220	G→C	8.0%	intergenic (‑207/‑169)	PP_1388 ← / → PP_1389	EmrB/QacA family drug resistance transporter/oxaloacetate decarboxylase
RA	1,585,221	T→C	8.1%	intergenic (‑208/‑168)	PP_1388 ← / → PP_1389	EmrB/QacA family drug resistance transporter/oxaloacetate decarboxylase
RA	1,591,982	C→A	12.3%	intergenic (‑89/‑114)	PP_1395 ← / → PP_1396	AraC family transcriptional regulator/hypothetical protein
RA	1,591,987	T→G	11.6%	intergenic (‑94/‑109)	PP_1395 ← / → PP_1396	AraC family transcriptional regulator/hypothetical protein
RA	1,592,302	T→A	6.5%	G69G (GGT→GGA)	PP_1396 →	hypothetical protein
RA	1,595,662	A→G	10.4%	intergenic (‑240/+14)	kgtP ← / ← dctD‑III	alpha‑ketoglutarate permease/C4‑dicarboxylate transport transcriptional regulator
RA	1,595,669	T→A	10.2%	intergenic (‑247/+7)	kgtP ← / ← dctD‑III	alpha‑ketoglutarate permease/C4‑dicarboxylate transport transcriptional regulator
RA	1,595,670	T→A	10.1%	intergenic (‑248/+6)	kgtP ← / ← dctD‑III	alpha‑ketoglutarate permease/C4‑dicarboxylate transport transcriptional regulator
RA	1,595,677	C→T	9.6%	*445* (TGA→TAA)	dctD‑III ←	C4‑dicarboxylate transport transcriptional regulator
RA	1,595,911	G→A	6.9%	A367V (GCG→GTG)	dctD‑III ←	C4‑dicarboxylate transport transcriptional regulator
RA	1,598,400	T→C	8.3%	N121S (AAC→AGC) ‡	dctB ←	C4‑dicarboxylate transport sensor protein
RA	1,598,401	T→A	7.8%	N121Y (AAC→TAC) ‡	dctB ←	C4‑dicarboxylate transport sensor protein
RA	1,598,402	G→A	8.3%	S120S (AGC→AGT)	dctB ←	C4‑dicarboxylate transport sensor protein
RA	1,622,431	G→A	9.0%	G449S (GGC→AGC)	PP_1421 →	sensor histidine kinase TctE
RA	1,622,907	C→G	5.7%	G150G (GGG→GGC)	PP_1422 ←	hypothetical protein
RA	1,622,914	A→T	5.7%	L148* (TTG→TAG) ‡	PP_1422 ←	hypothetical protein
RA	1,622,915	A→G	5.5%	L148L (TTG→CTG) ‡	PP_1422 ←	hypothetical protein
RA	1,622,921	C→G	5.9%	A146P (GCC→CCC)	PP_1422 ←	hypothetical protein
RA	1,637,212	T→C	5.8%	L221P (CTG→CCG)	pdxJ →	pyridoxine 5'‑phosphate synthase
RA	1,642,237	T→C	7.0%	intergenic (‑65/+87)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,238	G→A	7.0%	intergenic (‑66/+86)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,242	G→C	6.7%	intergenic (‑70/+82)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,243	T→C	6.6%	intergenic (‑71/+81)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,245	C→T	6.6%	intergenic (‑73/+79)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,246	T→C	7.9%	intergenic (‑74/+78)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,253	A→G	8.8%	intergenic (‑81/+71)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,255	T→C	9.0%	intergenic (‑83/+69)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,264	G→A	14.4%	intergenic (‑92/+60)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,271	G→C	12.8%	intergenic (‑99/+53)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,277	G→C	12.7%	intergenic (‑105/+47)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,278	C→G	12.0%	intergenic (‑106/+46)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,279	G→C	12.0%	intergenic (‑107/+45)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,285	G→C	11.8%	intergenic (‑113/+39)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,292	T→C	7.7%	intergenic (‑120/+32)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,431	G→A	7.1%	P771S (CCG→TCG)	lon‑I ←	DNA‑binding ATP‑dependent protease
RA	1,657,941	G→C	5.5%	P185A (CCA→GCA)	PP_1450 ←	TPS family activation/secretion protein
RA	1,665,250	G→C	6.0%	R206R (CGC→CGG)	PP_1459 ←	CBS domain‑containing protein
RA	1,667,902	A→G	8.1%	S302G (AGC→GGC)	ffh →	signal recognition particle GTPase subunit
RA	1,667,908	A→C	12.7%	I304L (ATC→CTC)	ffh →	signal recognition particle GTPase subunit
RA	1,667,913	G→T	13.5%	E305D (GAG→GAT)	ffh →	signal recognition particle GTPase subunit
RA	1,667,919	C→T	14.5%	A307A (GCC→GCT)	ffh →	signal recognition particle GTPase subunit
RA	1,680,753	G→A	9.3%	L16L (CTC→CTT)	PP_1475 ←	CAIB/BAIF family protein
RA	1,683,248	C→G	11.1%	intergenic (+57/‑174)	recJ → / → PP_1478	ssDNA‑specific exonuclease RecJ/xenobiotic reductase
RA	1,683,251	C→G	11.0%	intergenic (+60/‑171)	recJ → / → PP_1478	ssDNA‑specific exonuclease RecJ/xenobiotic reductase
RA	1,685,607	T→C	5.8%	D391G (GAT→GGT)	patD ←	medium chain aldehyde dehydrogenase
RA	1,685,781	C→A	5.6%	G333V (GGG→GTG)	patD ←	medium chain aldehyde dehydrogenase
RA	1,685,783	G→C	5.4%	A332A (GCC→GCG)	patD ←	medium chain aldehyde dehydrogenase
RA	1,685,789	C→A	5.6%	K330N (AAG→AAT) ‡	patD ←	medium chain aldehyde dehydrogenase
RA	1,685,791	T→G	5.6%	K330Q (AAG→CAG) ‡	patD ←	medium chain aldehyde dehydrogenase
RA	1,685,799	T→G	5.7%	H327P (CAC→CCC)	patD ←	medium chain aldehyde dehydrogenase
RA	1,685,862	C→T	7.8%	S306N (AGC→AAC)	patD ←	medium chain aldehyde dehydrogenase
RA	1,691,772	T→C	6.0%	intergenic (+39/‑132)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,773	C→G	6.3%	intergenic (+40/‑131)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,783	C→A	6.3%	intergenic (+50/‑121)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,786	T→G	6.4%	intergenic (+53/‑118)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,703,248	A→G	37.3%	intergenic (+97/‑70)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,250	G→C	38.0%	intergenic (+99/‑68)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,252	C→T	37.8%	intergenic (+101/‑66)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,279	G→A	11.1%	intergenic (+128/‑39)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,284	A→G	10.3%	intergenic (+133/‑34)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,704,636	T→A	10.3%	M1M (TTG→ATG) †‡	PP_1499 →	hypothetical protein
RA	1,704,637	T→A	8.6%	M1* (TTG→TAG) †‡	PP_1499 →	hypothetical protein
RA	1,707,227	G→C	8.2%	intergenic (+45/+97)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,707,230	G→C	8.0%	intergenic (+48/+94)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,719,284	C→A	7.4%	intergenic (+45/+85)	PP_1514 → / ← PP_1515	hypothetical protein/Transcriptional regulator, tetR family
RA	1,719,285	A→G	7.4%	intergenic (+46/+84)	PP_1514 → / ← PP_1515	hypothetical protein/Transcriptional regulator, tetR family
RA	1,719,287	T→G	7.2%	intergenic (+48/+82)	PP_1514 → / ← PP_1515	hypothetical protein/Transcriptional regulator, tetR family
RA	1,719,292	T→C	7.2%	intergenic (+53/+77)	PP_1514 → / ← PP_1515	hypothetical protein/Transcriptional regulator, tetR family
RA	1,725,784	C→G	5.9%	E794Q (GAG→CAG)	plsB ←	glycerol‑3‑phosphate acyltransferase
RA	1,748,903	A→G	8.3%	intergenic (‑236/‑96)	PP_1548 ← / → PP_5744	hypothetical protein/hypothetical protein
RA	1,751,079	T→G	20.3%	P146P (CCT→CCG)	PP_1551 →	replication protein O
RA	1,751,080	T→A	16.1%	S147T (TCG→ACG) ‡	PP_1551 →	replication protein O
RA	1,751,081	C→A	19.2%	S147* (TCG→TAG) ‡	PP_1551 →	replication protein O
RA	1,751,089	Δ1 bp	12.5%	coding (448/855 nt)	PP_1551 →	replication protein O
RA	1,757,731	C→A	5.8%	L263I (CTA→ATA)	PP_1563 →	terminase large subunit
RA	1,757,734	T→G	6.2%	W264G (TGG→GGG)	PP_1563 →	terminase large subunit
RA	1,758,290	A→C	7.0%	Q449P (CAG→CCG) ‡	PP_1563 →	terminase large subunit
RA	1,758,291	G→T	7.7%	Q449H (CAG→CAT) ‡	PP_1563 →	terminase large subunit
RA	1,761,927	A→T	5.7%	N359Y (AAC→TAC) ‡	PP_1567 →	capsid protein
RA	1,761,928	A→T	5.7%	N359I (AAC→ATC) ‡	PP_1567 →	capsid protein
RA	1,777,524	C→G	8.6%	intergenic (+258/+34)	PP_5476 → / ← PP_1585	hypothetical protein/antidote protein
RA	1,777,525	C→G	8.6%	intergenic (+259/+33)	PP_5476 → / ← PP_1585	hypothetical protein/antidote protein
RA	1,782,535	C→A	8.7%	Q514H (CAG→CAT) ‡	glnD ←	uridylyltransferase
RA	1,782,536	T→G	8.7%	Q514P (CAG→CCG) ‡	glnD ←	uridylyltransferase
RA	1,784,031	C→G	5.4%	A16P (GCG→CCG)	glnD ←	uridylyltransferase
RA	1,784,032	C→G	5.4%	Q15H (CAG→CAC) ‡	glnD ←	uridylyltransferase
RA	1,784,033	T→C	5.3%	Q15R (CAG→CGG) ‡	glnD ←	uridylyltransferase
RA	1,788,630	G→C	7.1%	V35L (GTG→CTG) ‡	uppS →	(2E,6E)‑farnesyl‑diphosphate specific ditrans,polycis‑undecaprenyl‑diphosphate synthase
RA	1,788,631	T→A	7.2%	V35E (GTG→GAG) ‡	uppS →	(2E,6E)‑farnesyl‑diphosphate specific ditrans,polycis‑undecaprenyl‑diphosphate synthase
RA	1,788,632	G→C	7.8%	V35V (GTG→GTC) ‡	uppS →	(2E,6E)‑farnesyl‑diphosphate specific ditrans,polycis‑undecaprenyl‑diphosphate synthase
RA	1,808,088	A→C	6.7%	K47Q (AAG→CAG) ‡	kdsA‑I →	2‑dehydro‑3‑deoxyphosphooctonate aldolase
RA	1,808,089	A→T	6.5%	K47M (AAG→ATG) ‡	kdsA‑I →	2‑dehydro‑3‑deoxyphosphooctonate aldolase
RA	1,808,090	G→T	6.5%	K47N (AAG→AAT) ‡	kdsA‑I →	2‑dehydro‑3‑deoxyphosphooctonate aldolase
RA	1,809,176	G→T	7.6%	R76L (CGT→CTT)	eno →	enolase
RA	1,809,179	A→C	7.4%	D77A (GAC→GCC)	eno →	enolase
RA	1,809,182	T→A	7.6%	L78Q (CTG→CAG)	eno →	enolase
RA	1,809,185	T→A	7.6%	L79Q (CTG→CAG)	eno →	enolase
RA	1,809,188	T→A	7.6%	L80Q (CTG→CAG)	eno →	enolase
RA	1,812,302	G→C	7.8%	A39G (GCC→GGC) ‡	PP_1615 ←	LysR family transcriptional regulator
RA	1,812,303	C→A	9.6%	A39S (GCC→TCC) ‡	PP_1615 ←	LysR family transcriptional regulator
RA	1,812,308	T→G	8.0%	Q37P (CAG→CCG) ‡	PP_1615 ←	LysR family transcriptional regulator
RA	1,812,309	G→C	8.0%	Q37E (CAG→GAG) ‡	PP_1615 ←	LysR family transcriptional regulator
RA	1,820,944	C→A	23.5%	P236Q (CCA→CAA)	PP_1624 →	group II intron‑encoding maturase
RA	1,831,777	G→A	7.4%	R219Q (CGG→CAG)	yfiP →	hypothetical protein
RA	1,831,780	T→C	7.4%	L220P (CTG→CCG)	yfiP →	hypothetical protein
RA	1,843,584	G→A	9.7%	Q404* (CAG→TAG)	gacS ←	sensor protein GacS
RA	1,846,297	Δ1 bp	5.7%	coding (588/1377 nt)	pfeS‑II →	histidine kinase
RA	1,846,303:1	+A	5.8%	coding (594/1377 nt)	pfeS‑II →	histidine kinase
RA	1,854,559	G→A	8.1%	A141T (GCA→ACA)	PP_1658 →	hypothetical protein
RA	1,859,398	G→C	6.0%	T4S (ACT→AGT) ‡	PP_1662 ←	hypothetical protein
RA	1,859,399	T→A	6.0%	T4S (ACT→TCT) ‡	PP_1662 ←	hypothetical protein
RA	1,859,400	G→C	6.0%	H3Q (CAC→CAG)	PP_1662 ←	hypothetical protein
RA	1,876,964	G→A	7.5%	R260H (CGC→CAC)	PP_1682 →	glycoside hydrolase family protein
RA	1,877,474	C→G	7.9%	A15A (GCC→GCG)	PP_1683 →	MarR family transcriptional regulator
RA	1,877,475	C→G	9.4%	R16G (CGC→GGC)	PP_1683 →	MarR family transcriptional regulator
RA	1,892,526	C→G	8.3%	intergenic (+36/‑59)	PP_1697 → / → PP_1698	transcriptional regulator, GntR family/MFS transporter
RA	1,892,527	T→C	8.3%	intergenic (+37/‑58)	PP_1697 → / → PP_1698	transcriptional regulator, GntR family/MFS transporter
RA	1,892,528	G→A	8.3%	intergenic (+38/‑57)	PP_1697 → / → PP_1698	transcriptional regulator, GntR family/MFS transporter
RA	1,892,529	C→G	8.3%	intergenic (+39/‑56)	PP_1697 → / → PP_1698	transcriptional regulator, GntR family/MFS transporter
RA	1,899,342	A→G	6.8%	intergenic (+412/‑108)	PP_t18 → / → PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
RA	1,915,598:1	+A	9.5%	intergenic (+26/‑263)	fklB‑II → / → PP_1715	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	1,915,602	T→A	10.7%	intergenic (+30/‑259)	fklB‑II → / → PP_1715	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	1,915,605	Δ1 bp	9.5%	intergenic (+33/‑256)	fklB‑II → / → PP_1715	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	1,915,826	A→T	10.9%	intergenic (+254/‑35)	fklB‑II → / → PP_1715	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	1,915,828	A→T	10.9%	intergenic (+256/‑33)	fklB‑II → / → PP_1715	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	1,915,830	A→T	10.9%	intergenic (+258/‑31)	fklB‑II → / → PP_1715	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	1,916,845:1	+C	8.0%	coding (98/369 nt)	PP_1717 →	hypothetical protein
RA	1,916,850	Δ1 bp	8.0%	coding (103/369 nt)	PP_1717 →	hypothetical protein
RA	1,921,549	T→A	13.8%	intergenic (+24/+37)	PP_1720 → / ← PP_1721	alcohol dehydrogenase/phosphoserine phosphatase
RA	1,921,550	T→A	13.8%	intergenic (+25/+36)	PP_1720 → / ← PP_1721	alcohol dehydrogenase/phosphoserine phosphatase
RA	1,922,815	G→C	7.7%	A143A (GCC→GCG)	PP_1722 ←	ABC transporter ATP‑binding protein
RA	1,922,818	C→G	7.7%	V142V (GTG→GTC) ‡	PP_1722 ←	ABC transporter ATP‑binding protein
RA	1,922,819	A→T	7.2%	V142E (GTG→GAG) ‡	PP_1722 ←	ABC transporter ATP‑binding protein
RA	1,922,820	C→G	7.9%	V142L (GTG→CTG) ‡	PP_1722 ←	ABC transporter ATP‑binding protein
RA	1,922,823	G→C	7.9%	R141G (CGC→GGC)	PP_1722 ←	ABC transporter ATP‑binding protein
RA	1,923,100	G→A	8.3%	C48C (TGC→TGT)	PP_1722 ←	ABC transporter ATP‑binding protein
RA	1,926,513	T→G	7.1%	D118A (GAC→GCC)	PP_1726 ←	ABC transporter substrate‑binding protein
RA	1,931,867	C→T	7.4%	intergenic (‑140/+31)	apeB ← / ← rluA	M18 family aminopeptidase/bifunctional tRNA pseudouridine(32) synthase TrmQ/ribosomal large subunit pseudouridine synthase RluA
RA	1,932,638:1	+C	100%	intergenic (‑105/+45)	rluA ← / ← minE	bifunctional tRNA pseudouridine(32) synthase TrmQ/ribosomal large subunit pseudouridine synthase RluA/cell division topological specificity factor
RA	1,936,277	G→A	6.0%	P193P (CCG→CCA)	PP_1736 →	hypothetical protein
RA	1,938,839	C→T	7.4%	E73K (GAG→AAG)	PP_1738 ←	hypothetical protein
RA	1,938,844	T→C	6.1%	E71G (GAG→GGG)	PP_1738 ←	hypothetical protein
RA	1,938,846	C→G	6.2%	P70P (CCG→CCC)	PP_1738 ←	hypothetical protein
RA	1,938,853	A→G	6.0%	L68S (TTG→TCG)	PP_1738 ←	hypothetical protein
RA	1,944,529	C→A	7.9%	intergenic (+30/+232)	actP‑I → / ← PP_1744	acetate permease/hypothetical protein
RA	1,944,530	T→C	8.2%	intergenic (+31/+231)	actP‑I → / ← PP_1744	acetate permease/hypothetical protein
RA	1,944,531	T→A	8.0%	intergenic (+32/+230)	actP‑I → / ← PP_1744	acetate permease/hypothetical protein
RA	1,944,532	G→A	8.0%	intergenic (+33/+229)	actP‑I → / ← PP_1744	acetate permease/hypothetical protein
RA	1,944,533	T→G	8.0%	intergenic (+34/+228)	actP‑I → / ← PP_1744	acetate permease/hypothetical protein
RA	1,946,536	T→A	6.3%	intergenic (‑65/+19)	PP_1747 ← / ← PP_1748	hypothetical protein/hypothetical protein
RA	1,948,173	C→G	10.4%	R494R (CGG→CGC)	PP_1749 ←	acetyltransferase
RA	1,951,834	G→C	10.9%	I569M (ATC→ATG) ‡	mnmC ←	methyltransferase/FAD‑dependent oxidoreductase
RA	1,951,835	A→C	11.1%	I569S (ATC→AGC) ‡	mnmC ←	methyltransferase/FAD‑dependent oxidoreductase
RA	1,951,838	G→T	11.5%	P568H (CCT→CAT) ‡	mnmC ←	methyltransferase/FAD‑dependent oxidoreductase
RA	1,951,839	G→C	11.6%	P568A (CCT→GCT) ‡	mnmC ←	methyltransferase/FAD‑dependent oxidoreductase
RA	1,953,403	G→A	8.0%	R46R (CGC→CGT) ‡	mnmC ←	methyltransferase/FAD‑dependent oxidoreductase
RA	1,953,405	G→C	8.0%	R46G (CGC→GGC) ‡	mnmC ←	methyltransferase/FAD‑dependent oxidoreductase
RA	1,953,406	G→C	8.0%	T45T (ACC→ACG) ‡	mnmC ←	methyltransferase/FAD‑dependent oxidoreductase
RA	1,953,408	T→C	8.0%	T45A (ACC→GCC) ‡	mnmC ←	methyltransferase/FAD‑dependent oxidoreductase
RA	2,002,014	G→C	10.3%	G652A (GGC→GCC)	PP_1786 →	glycosyl transferase
RA	2,029,783	G→A	8.1%	G508D (GGC→GAC)	wbpM →	polysaccharide biosynthesis protein
RA	2,032,086	G→A	8.3%	A53A (GCC→GCT)	kdsA‑II ←	2‑dehydro‑3‑deoxyphosphooctonate aldolase
RA	2,039,703	A→C	19.0%	P33P (CCT→CCG) ‡	PP_1812 ←	hypothetical protein
RA	2,039,704	G→T	19.4%	P33H (CCT→CAT) ‡	PP_1812 ←	hypothetical protein
RA	2,053,618	T→C	13.3%	intergenic (‑18/+48)	PP_1828 ← / ← PP_1829	hypothetical protein/alpha/beta family hydrolase
RA	2,053,627	T→C	12.1%	intergenic (‑27/+39)	PP_1828 ← / ← PP_1829	hypothetical protein/alpha/beta family hydrolase
RA	2,053,629	T→A	11.8%	intergenic (‑29/+37)	PP_1828 ← / ← PP_1829	hypothetical protein/alpha/beta family hydrolase
RA	2,053,630	A→T	14.2%	intergenic (‑30/+36)	PP_1828 ← / ← PP_1829	hypothetical protein/alpha/beta family hydrolase
RA	2,053,631	T→A	11.8%	intergenic (‑31/+35)	PP_1828 ← / ← PP_1829	hypothetical protein/alpha/beta family hydrolase
RA	2,053,633	G→A	11.7%	intergenic (‑33/+33)	PP_1828 ← / ← PP_1829	hypothetical protein/alpha/beta family hydrolase
RA	2,061,400	C→T	6.6%	L105L (CTC→CTT)	PP_1838 →	membrane protein
RA	2,068,151	A→T	10.8%	intergenic (‑96/+25)	plsC ← / ← PP_1845	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase/enoyl‑CoA hydratase/isomerase family protein
RA	2,068,152	A→T	10.6%	intergenic (‑97/+24)	plsC ← / ← PP_1845	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase/enoyl‑CoA hydratase/isomerase family protein
RA	2,072,914	G→A	9.3%	T165I (ACC→ATC)	PP_1847 ←	TonB‑dependent ferric siderophore receptor
RA	2,072,918	C→A	11.2%	V164L (GTG→TTG)	PP_1847 ←	TonB‑dependent ferric siderophore receptor
RA	2,072,919	A→C	9.1%	Y163* (TAT→TAG)	PP_1847 ←	TonB‑dependent ferric siderophore receptor
RA	2,072,922	G→T	8.9%	N162K (AAC→AAA) ‡	PP_1847 ←	TonB‑dependent ferric siderophore receptor
RA	2,072,923	T→G	8.5%	N162T (AAC→ACC) ‡	PP_1847 ←	TonB‑dependent ferric siderophore receptor
RA	2,072,927	T→C	10.4%	I161V (ATC→GTC)	PP_1847 ←	TonB‑dependent ferric siderophore receptor
RA	2,074,295	C→G	6.5%	G362R (GGC→CGC)	ygaY ←	transporter YgaY
RA	2,074,297	T→C	6.5%	Q361R (CAG→CGG)	ygaY ←	transporter YgaY
RA	2,074,300	C→G	6.5%	R360P (CGC→CCC)	ygaY ←	transporter YgaY
RA	2,092,380	G→A	7.1%	intergenic (+26/+65)	deaD → / ← ygiD	ATP‑dependent DEAD‑box RNA helicase DeaD/4,5‑DOPA‑dioxygenase
RA	2,092,382	T→C	7.6%	intergenic (+28/+63)	deaD → / ← ygiD	ATP‑dependent DEAD‑box RNA helicase DeaD/4,5‑DOPA‑dioxygenase
RA	2,092,385	G→A	7.5%	intergenic (+31/+60)	deaD → / ← ygiD	ATP‑dependent DEAD‑box RNA helicase DeaD/4,5‑DOPA‑dioxygenase
RA	2,092,387	T→C	7.4%	intergenic (+33/+58)	deaD → / ← ygiD	ATP‑dependent DEAD‑box RNA helicase DeaD/4,5‑DOPA‑dioxygenase
RA	2,103,337	T→C	6.5%	intergenic (+136/+32)	PP_t24 → / ← PP_1879	tRNA‑Gly/hypothetical protein
RA	2,103,339	T→G	6.5%	intergenic (+138/+30)	PP_t24 → / ← PP_1879	tRNA‑Gly/hypothetical protein
RA	2,103,344	G→A	6.8%	intergenic (+143/+25)	PP_t24 → / ← PP_1879	tRNA‑Gly/hypothetical protein
RA	2,104,902	G→C	9.8%	intergenic (‑19/+22)	PP_1879 ← / ← PP_1880	hypothetical protein/outer membrane autotransporter
RA	2,104,903	C→A	9.8%	intergenic (‑20/+21)	PP_1879 ← / ← PP_1880	hypothetical protein/outer membrane autotransporter
RA	2,104,906	T→G	9.1%	intergenic (‑23/+18)	PP_1879 ← / ← PP_1880	hypothetical protein/outer membrane autotransporter
RA	2,104,907	G→C	10.3%	intergenic (‑24/+17)	PP_1879 ← / ← PP_1880	hypothetical protein/outer membrane autotransporter
RA	2,109,859	C→G	8.1%	G1476A (GGT→GCT)	PP_1882 ←	membrane protein
RA	2,134,271	A→C	9.5%	intergenic (‑37/+32)	PP_1892 ← / ← fadE	hypothetical protein/medium‑long chain acyl‑CoA dehydrogenase
RA	2,134,278	G→T	10.2%	intergenic (‑44/+25)	PP_1892 ← / ← fadE	hypothetical protein/medium‑long chain acyl‑CoA dehydrogenase
RA	2,147,208	T→G	14.1%	intergenic (+81/+36)	murB → / ← rne	UDP‑N‑acetylenolpyruvoylglucosamine reductase/ribonuclease E
RA	2,147,209	T→C	14.3%	intergenic (+82/+35)	murB → / ← rne	UDP‑N‑acetylenolpyruvoylglucosamine reductase/ribonuclease E
RA	2,147,210	G→A	14.3%	intergenic (+83/+34)	murB → / ← rne	UDP‑N‑acetylenolpyruvoylglucosamine reductase/ribonuclease E
RA	2,147,211	C→A	14.3%	intergenic (+84/+33)	murB → / ← rne	UDP‑N‑acetylenolpyruvoylglucosamine reductase/ribonuclease E
RA	2,157,948	C→A	10.5%	R100S (CGC→AGC)	fabG →	3‑oxoacyl‑ACP reductase subunit
RA	2,160,917	T→G	8.2%	C219G (TGC→GGC) ‡	pabC →	4‑amino‑4‑deoxychorismate lyase
RA	2,160,918	G→C	8.2%	C219S (TGC→TCC) ‡	pabC →	4‑amino‑4‑deoxychorismate lyase
RA	2,160,919	C→A	8.2%	C219* (TGC→TGA) ‡	pabC →	4‑amino‑4‑deoxychorismate lyase
RA	2,171,501	T→C	9.9%	intergenic (+36/+367)	PP_5484 → / ← PP_1924	hypothetical protein/phosphinothricin N‑acetyltransferase
RA	2,171,502	T→A	11.3%	intergenic (+37/+366)	PP_5484 → / ← PP_1924	hypothetical protein/phosphinothricin N‑acetyltransferase
RA	2,171,503	G→A	9.2%	intergenic (+38/+365)	PP_5484 → / ← PP_1924	hypothetical protein/phosphinothricin N‑acetyltransferase
RA	2,177,447	G→A	10.7%	E115K (GAG→AAG)	PP_5485 →	GNAT family acetyltransferase
RA	2,208,137	A→T	9.1%	N117Y (AAT→TAT)	PP_1951 →	short‑chain dehydrogenase/reductase family oxidoreductase
RA	2,208,140	A→T	9.1%	M118L (ATG→TTG)	PP_1951 →	short‑chain dehydrogenase/reductase family oxidoreductase
RA	2,218,221	T→C	7.8%	intergenic (‑47/+193)	PP_1958 ← / ← PP_5495	hypothetical protein/hypothetical protein
RA	2,221,358	A→T	7.7%	L90M (TTG→ATG)	PP_1960 ←	hypothetical protein
RA	2,238,142	A→T	16.1%	F148I (TTC→ATC)	PP_1975 ←	EmrB/QacA family drug resistance transporter
RA	2,238,143	C→G	12.7%	M147I (ATG→ATC) ‡	PP_1975 ←	EmrB/QacA family drug resistance transporter
RA	2,238,144	A→T	12.9%	M147K (ATG→AAG) ‡	PP_1975 ←	EmrB/QacA family drug resistance transporter
RA	2,241,568	G→C	10.8%	noncoding (35/76 nt)	PP_t25 →	tRNA‑Ala
RA	2,242,665	G→C	11.4%	A80P (GCC→CCC)	PP_1978 →	TetR family transcriptional regulator
RA	2,242,670	G→C	9.1%	G81G (GGG→GGC)	PP_1978 →	TetR family transcriptional regulator
RA	2,242,672	G→A	8.9%	R82Q (CGG→CAG)	PP_1978 →	TetR family transcriptional regulator
RA	2,242,676	A→C	8.5%	R83R (CGA→CGC)	PP_1978 →	TetR family transcriptional regulator
RA	2,242,677	G→T	8.7%	A84S (GCG→TCG)	PP_1978 →	TetR family transcriptional regulator
RA	2,242,681	T→C	8.3%	L85P (CTG→CCG)	PP_1978 →	TetR family transcriptional regulator
RA	2,242,683	G→C	8.2%	A86P (GCC→CCC)	PP_1978 →	TetR family transcriptional regulator
RA	2,242,688	G→C	8.8%	G87G (GGG→GGC)	PP_1978 →	TetR family transcriptional regulator
RA	2,273,062	C→G	11.3%	intergenic (+27/+264)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,273,066	A→T	11.2%	intergenic (+31/+260)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,273,070	C→G	11.1%	intergenic (+35/+256)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,273,080	C→T	10.7%	intergenic (+45/+246)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,282,770	T→G	33.9%	intergenic (‑162/+67)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,774	G→C	39.4%	intergenic (‑166/+63)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,775	G→C	37.8%	intergenic (‑167/+62)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,779	C→A	38.4%	intergenic (‑171/+58)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,812	C→A	7.3%	intergenic (‑204/+25)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,290,396	C→T	7.0%	intergenic (+21/‑254)	pepN → / → PP_2018	aminopeptidase N/BNR domain‑containing protein
RA	2,290,397	C→G	7.7%	intergenic (+22/‑253)	pepN → / → PP_2018	aminopeptidase N/BNR domain‑containing protein
RA	2,290,398	A→G	7.0%	intergenic (+23/‑252)	pepN → / → PP_2018	aminopeptidase N/BNR domain‑containing protein
RA	2,295,976	A→G	5.0%	W171R (TGG→CGG)	PP_2023 ←	glutathione S‑transferase family protein
RA	2,295,980	C→T	5.1%	P169P (CCG→CCA)	PP_2023 ←	glutathione S‑transferase family protein
RA	2,296,094	Δ1 bp	5.8%	coding (393/600 nt)	PP_2023 ←	glutathione S‑transferase family protein
RA	2,296,101	T→G	7.5%	E129A (GAG→GCG) ‡	PP_2023 ←	glutathione S‑transferase family protein
RA	2,296,102	C→A	6.0%	E129* (GAG→TAG) ‡	PP_2023 ←	glutathione S‑transferase family protein
RA	2,300,416	C→A	6.1%	R314L (CGC→CTC)	sbcD ←	exonuclease subunit SbcD
RA	2,313,672	A→T	7.1%	L139Q (CTG→CAG)	benE‑I ←	benzoate transport protein
RA	2,313,675	A→T	7.1%	L138Q (CTG→CAG)	benE‑I ←	benzoate transport protein
RA	2,336,497	C→T	5.0%	intergenic (‑41/+39)	PP_2052 ← / ← PP_5500	bifunctional sugar‑phosphatase/mannitol‑1‑phosphate 5‑dehydrogenase/hypothetical protein
RA	2,336,498	A→T	5.0%	intergenic (‑42/+38)	PP_2052 ← / ← PP_5500	bifunctional sugar‑phosphatase/mannitol‑1‑phosphate 5‑dehydrogenase/hypothetical protein
RA	2,336,499	A→G	5.0%	intergenic (‑43/+37)	PP_2052 ← / ← PP_5500	bifunctional sugar‑phosphatase/mannitol‑1‑phosphate 5‑dehydrogenase/hypothetical protein
RA	2,338,785	A→G	7.5%	D193G (GAC→GGC)	PP_2055 →	isomerase
RA	2,338,796	C→T	7.6%	P197S (CCG→TCG)	PP_2055 →	isomerase
RA	2,340,703	A→C	5.9%	intergenic (+37/‑78)	dctA‑II → / → yraO	C4‑dicarboxylate transport protein/transporter YraO
RA	2,340,707	G→A	5.3%	intergenic (+41/‑74)	dctA‑II → / → yraO	C4‑dicarboxylate transport protein/transporter YraO
RA	2,340,708	T→A	5.9%	intergenic (+42/‑73)	dctA‑II → / → yraO	C4‑dicarboxylate transport protein/transporter YraO
RA	2,340,709	T→C	5.3%	intergenic (+43/‑72)	dctA‑II → / → yraO	C4‑dicarboxylate transport protein/transporter YraO
RA	2,340,713	G→T	5.0%	intergenic (+47/‑68)	dctA‑II → / → yraO	C4‑dicarboxylate transport protein/transporter YraO
RA	2,361,719	C→G	6.6%	G720R (GGC→CGC)	PP_2076 ←	hypothetical protein
RA	2,361,724	C→G	6.0%	R718P (CGG→CCG)	PP_2076 ←	hypothetical protein
RA	2,363,386	T→A	6.5%	D164V (GAC→GTC)	PP_2076 ←	hypothetical protein
RA	2,369,767	T→C	5.8%	L862P (CTG→CCG) ‡	gdhB →	NAD‑specific glutamate dehydrogenase
RA	2,369,768	G→C	6.0%	L862L (CTG→CTC) ‡	gdhB →	NAD‑specific glutamate dehydrogenase
RA	2,369,769	G→A	6.2%	G863S (GGC→AGC)	gdhB →	NAD‑specific glutamate dehydrogenase
RA	2,369,777	C→G	5.3%	S865R (AGC→AGG)	gdhB →	NAD‑specific glutamate dehydrogenase
RA	2,392,617	C→G	7.5%	I382M (ATC→ATG)	PP_2097 →	sensory box protein
RA	2,396,278	T→C	7.0%	S1127G (AGC→GGC)	PP_2100 ←	two‑component system sensor protein
RA	2,396,280	G→A	5.4%	A1126V (GCC→GTC)	PP_2100 ←	two‑component system sensor protein
RA	2,396,283	A→T	5.4%	L1125Q (CTG→CAG)	PP_2100 ←	two‑component system sensor protein
RA	2,396,286	T→C	5.4%	D1124G (GAC→GGC)	PP_2100 ←	two‑component system sensor protein
RA	2,396,288	G→A	5.4%	A1123A (GCC→GCT)	PP_2100 ←	two‑component system sensor protein
RA	2,396,295	A→T	5.7%	L1121H (CTT→CAT)	PP_2100 ←	two‑component system sensor protein
RA	2,405,348	G→C	6.2%	W115C (TGG→TGC)	PP_2108 →	hypothetical protein
RA	2,405,349	G→A	6.3%	V116M (GTG→ATG) ‡	PP_2108 →	hypothetical protein
RA	2,405,350	T→C	6.0%	V116A (GTG→GCG) ‡	PP_2108 →	hypothetical protein
RA	2,405,351	G→C	6.0%	V116V (GTG→GTC) ‡	PP_2108 →	hypothetical protein
RA	2,412,905	G→C	5.3%	intergenic (+169/‑252)	rlmM → / → PP_2114	23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase
RA	2,415,307	C→T	6.6%	intergenic (+43/‑18)	tusA‑II → / → pdxB	sulfurtransferase/erythronate‑4‑phosphate dehydrogenase
RA	2,415,310	A→T	6.3%	intergenic (+46/‑15)	tusA‑II → / → pdxB	sulfurtransferase/erythronate‑4‑phosphate dehydrogenase
RA	2,415,312	A→T	6.4%	intergenic (+48/‑13)	tusA‑II → / → pdxB	sulfurtransferase/erythronate‑4‑phosphate dehydrogenase
RA	2,415,314	A→T	6.4%	intergenic (+50/‑11)	tusA‑II → / → pdxB	sulfurtransferase/erythronate‑4‑phosphate dehydrogenase
RA	2,415,317	A→G	6.8%	intergenic (+53/‑8)	tusA‑II → / → pdxB	sulfurtransferase/erythronate‑4‑phosphate dehydrogenase
RA	2,420,598	Δ1 bp	14.0%	intergenic (+81/+26)	ctpH → / ← PP_t62	methyl‑accepting chemotaxis protein CtpH/tRNA‑Pro
RA	2,420,602:1	+T	13.6%	intergenic (+85/+22)	ctpH → / ← PP_t62	methyl‑accepting chemotaxis protein CtpH/tRNA‑Pro
RA	2,440,146	T→G	7.4%	L296R (CTC→CGC)	pcaF‑II →	beta‑ketoadipyl‑CoA thiolase subunit beta
RA	2,440,149	A→C	7.1%	K297T (AAG→ACG)	pcaF‑II →	beta‑ketoadipyl‑CoA thiolase subunit beta
RA	2,440,152	G→T	7.0%	R298L (CGT→CTT)	pcaF‑II →	beta‑ketoadipyl‑CoA thiolase subunit beta
RA	2,440,155	C→A	7.0%	A299E (GCG→GAG)	pcaF‑II →	beta‑ketoadipyl‑CoA thiolase subunit beta
RA	2,443,500	T→A	6.4%	F6I (TTT→ATT) ‡	PP_2140 →	hypothetical protein
RA	2,443,501	T→A	6.0%	F6Y (TTT→TAT) ‡	PP_2140 →	hypothetical protein
RA	2,443,502	T→A	5.9%	F6L (TTT→TTA) ‡	PP_2140 →	hypothetical protein
RA	2,444,415	A→C	7.5%	*159G (TGA→GGA)	sulA ←	cell division inhibitor SulA
RA	2,444,419	G→T	6.2%	L157L (CTC→CTA) ‡	sulA ←	cell division inhibitor SulA
RA	2,444,420	A→C	6.2%	L157R (CTC→CGC) ‡	sulA ←	cell division inhibitor SulA
RA	2,444,424	G→T	6.5%	R156S (CGC→AGC)	sulA ←	cell division inhibitor SulA
RA	2,445,681	G→A	5.7%	intergenic (‑170/‑46)	lexA‑I ← / → PP_2144	transcriptional repressor/TetR family transcriptional regulator
RA	2,445,684	T→C	6.2%	intergenic (‑173/‑43)	lexA‑I ← / → PP_2144	transcriptional repressor/TetR family transcriptional regulator
RA	2,447,051	T→G	5.1%	L147R (CTG→CGG)	nagZ →	beta‑N‑acetylglucosaminidase
RA	2,447,053	G→C	5.3%	A148P (GCC→CCC) ‡	nagZ →	beta‑N‑acetylglucosaminidase
RA	2,447,055	C→A	5.2%	A148A (GCC→GCA) ‡	nagZ →	beta‑N‑acetylglucosaminidase
RA	2,454,964	T→C	6.0%	D52G (GAC→GGC)	mfd ←	transcription‑repair coupling factor
RA	2,454,967	G→A	6.0%	A51V (GCC→GTC)	mfd ←	transcription‑repair coupling factor
RA	2,454,969	G→A	6.0%	A50A (GCC→GCT)	mfd ←	transcription‑repair coupling factor
RA	2,454,973	T→A	7.1%	Q49L (CAG→CTG)	mfd ←	transcription‑repair coupling factor
RA	2,454,977	T→C	7.3%	S48G (AGC→GGC)	mfd ←	transcription‑repair coupling factor
RA	2,454,979	T→C	7.1%	D47G (GAC→GGC)	mfd ←	transcription‑repair coupling factor
RA	2,454,982	G→A	7.2%	A46V (GCC→GTC)	mfd ←	transcription‑repair coupling factor
RA	2,454,988	A→T	7.3%	L44Q (CTG→CAG)	mfd ←	transcription‑repair coupling factor
RA	2,454,990	C→G	7.5%	L43L (CTG→CTC)	mfd ←	transcription‑repair coupling factor
RA	2,455,004	G→C	7.7%	R39G (CGC→GGC)	mfd ←	transcription‑repair coupling factor
RA	2,455,011	G→A	6.7%	S36S (AGC→AGT) ‡	mfd ←	transcription‑repair coupling factor
RA	2,455,012	C→G	6.7%	S36T (AGC→ACC) ‡	mfd ←	transcription‑repair coupling factor
RA	2,455,013	T→C	6.7%	S36G (AGC→GGC) ‡	mfd ←	transcription‑repair coupling factor
RA	2,456,052	T→C	5.6%	L256P (CTG→CCG)	gapB →	glyceraldehyde‑3‑phosphate dehydrogenase
RA	2,456,055	C→G	6.0%	A257G (GCC→GGC)	gapB →	glyceraldehyde‑3‑phosphate dehydrogenase
RA	2,456,057	T→A	6.1%	C258S (TGC→AGC) ‡	gapB →	glyceraldehyde‑3‑phosphate dehydrogenase
RA	2,456,059	C→G	6.1%	C258W (TGC→TGG) ‡	gapB →	glyceraldehyde‑3‑phosphate dehydrogenase
RA	2,456,062	G→A	6.4%	P259P (CCG→CCA)	gapB →	glyceraldehyde‑3‑phosphate dehydrogenase
RA	2,456,860	A→G	6.4%	intergenic (+111/‑70)	gapB → / → PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
RA	2,456,861	T→G	6.5%	intergenic (+112/‑69)	gapB → / → PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
RA	2,456,862	T→C	6.5%	intergenic (+113/‑68)	gapB → / → PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
RA	2,456,864	T→G	6.6%	intergenic (+115/‑66)	gapB → / → PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
RA	2,456,867	C→A	7.7%	intergenic (+118/‑63)	gapB → / → PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
RA	2,456,869	G→A	6.8%	intergenic (+120/‑61)	gapB → / → PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
RA	2,456,870	C→A	7.4%	intergenic (+121/‑60)	gapB → / → PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
RA	2,456,871	C→T	6.6%	intergenic (+122/‑59)	gapB → / → PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
RA	2,456,991	T→A	5.7%	L21Q (CTG→CAG)	PP_2150 →	thiamine biosynthesis lipoprotein
RA	2,456,994	A→C	6.7%	E22A (GAG→GCG)	PP_2150 →	thiamine biosynthesis lipoprotein
RA	2,456,997	G→T	5.8%	R23L (CGC→CTC)	PP_2150 →	thiamine biosynthesis lipoprotein
RA	2,457,000	T→A	5.7%	L24Q (CTG→CAG)	PP_2150 →	thiamine biosynthesis lipoprotein
RA	2,474,141	C→T	11.7%	intergenic (‑46/+134)	PP_2167 ← / ← tal	PhoD‑like phosphatase/transaldolase
RA	2,474,143	T→C	12.9%	intergenic (‑48/+132)	PP_2167 ← / ← tal	PhoD‑like phosphatase/transaldolase
RA	2,474,148	T→C	12.6%	intergenic (‑53/+127)	PP_2167 ← / ← tal	PhoD‑like phosphatase/transaldolase
RA	2,474,149	C→T	12.9%	intergenic (‑54/+126)	PP_2167 ← / ← tal	PhoD‑like phosphatase/transaldolase
RA	2,474,154	A→G	11.0%	intergenic (‑59/+121)	PP_2167 ← / ← tal	PhoD‑like phosphatase/transaldolase
RA	2,474,155	G→A	13.6%	intergenic (‑60/+120)	PP_2167 ← / ← tal	PhoD‑like phosphatase/transaldolase
RA	2,474,160	G→A	10.6%	intergenic (‑65/+115)	PP_2167 ← / ← tal	PhoD‑like phosphatase/transaldolase
RA	2,474,162	A→G	8.2%	intergenic (‑67/+113)	PP_2167 ← / ← tal	PhoD‑like phosphatase/transaldolase
RA	2,475,772	G→T	5.3%	R199R (CGC→CGA)	dusA ←	tRNA dihydrouridine synthase DusA
RA	2,477,009	G→C	5.1%	V182L (GTC→CTC)	PP_2170 →	chorismate mutase family protein
RA	2,478,840	G→A	5.0%	intergenic (+93/+352)	PP_2172 → / ← PP_2173	hypothetical protein/AraC family transcriptional regulator
RA	2,478,845	G→C	5.0%	intergenic (+98/+347)	PP_2172 → / ← PP_2173	hypothetical protein/AraC family transcriptional regulator
RA	2,478,849	T→G	5.5%	intergenic (+102/+343)	PP_2172 → / ← PP_2173	hypothetical protein/AraC family transcriptional regulator
RA	2,479,131	G→A	8.2%	intergenic (+384/+61)	PP_2172 → / ← PP_2173	hypothetical protein/AraC family transcriptional regulator
RA	2,479,133	T→G	7.5%	intergenic (+386/+59)	PP_2172 → / ← PP_2173	hypothetical protein/AraC family transcriptional regulator
RA	2,479,134	T→C	7.8%	intergenic (+387/+58)	PP_2172 → / ← PP_2173	hypothetical protein/AraC family transcriptional regulator
RA	2,479,137	C→A	7.6%	intergenic (+390/+55)	PP_2172 → / ← PP_2173	hypothetical protein/AraC family transcriptional regulator
RA	2,479,144	T→G	7.6%	intergenic (+397/+48)	PP_2172 → / ← PP_2173	hypothetical protein/AraC family transcriptional regulator
RA	2,479,147	G→A	8.1%	intergenic (+400/+45)	PP_2172 → / ← PP_2173	hypothetical protein/AraC family transcriptional regulator
RA	2,479,148	C→A	7.8%	intergenic (+401/+44)	PP_2172 → / ← PP_2173	hypothetical protein/AraC family transcriptional regulator
RA	2,479,150	T→C	8.0%	intergenic (+403/+42)	PP_2172 → / ← PP_2173	hypothetical protein/AraC family transcriptional regulator
RA	2,486,181	C→G	7.6%	A258G (GCC→GGC)	spuC‑I →	polyamine:pyruvate transaminase
RA	2,493,696	G→A	5.7%	intergenic (+36/+78)	PP_2186 → / ← PP_2187	formate dehydrogenase subunit delta/universal stress protein family protein
RA	2,493,734	G→C	5.0%	intergenic (+74/+40)	PP_2186 → / ← PP_2187	formate dehydrogenase subunit delta/universal stress protein family protein
RA	2,508,373	A→C	5.2%	L105R (CTT→CGT)	PP_2202 ←	membrane protein
RA	2,522,977	C→A	5.2%	R1410S (CGT→AGT) ‡	PP_2212 →	leucine‑rich repeat‑containing protein
RA	2,522,979	T→G	5.6%	R1410R (CGT→CGG) ‡	PP_2212 →	leucine‑rich repeat‑containing protein
RA	2,522,982	C→A	5.2%	Y1411* (TAC→TAA)	PP_2212 →	leucine‑rich repeat‑containing protein
RA	2,522,984	T→G	5.2%	L1412R (CTG→CGG)	PP_2212 →	leucine‑rich repeat‑containing protein
RA	2,540,809	T→A	16.7%	intergenic (+22/+27)	PP_2232 → / ← PP_2233	XRE family transcriptional regulator/isochorismatase family hydrolase
RA	2,540,810	G→C	16.3%	intergenic (+23/+26)	PP_2232 → / ← PP_2233	XRE family transcriptional regulator/isochorismatase family hydrolase
RA	2,540,811	T→A	14.6%	intergenic (+24/+25)	PP_2232 → / ← PP_2233	XRE family transcriptional regulator/isochorismatase family hydrolase
RA	2,546,666	T→C	8.3%	C589C (TGT→TGC)	PP_2238 →	metallopeptidase
RA	2,546,823	T→C	7.9%	intergenic (+22/+18)	PP_2238 → / ← PP_5504	metallopeptidase/hypothetical protein
RA	2,546,826	G→A	7.9%	intergenic (+25/+15)	PP_2238 → / ← PP_5504	metallopeptidase/hypothetical protein
RA	2,564,324	C→T	9.1%	G141G (GGC→GGT)	PP_2248 →	putative transporter
RA	2,568,693	T→A	7.0%	Q285H (CAA→CAT)	PP_2252 ←	hypothetical protein
RA	2,568,696	T→G	7.1%	E284D (GAA→GAC)	PP_2252 ←	hypothetical protein
RA	2,573,549	T→C	11.1%	I102T (ATC→ACC)	PP_2257 →	aerotaxis receptor
RA	2,573,551	C→T	11.1%	L103F (CTC→TTC)	PP_2257 →	aerotaxis receptor
RA	2,573,556	A→G	10.0%	E104E (GAA→GAG)	PP_2257 →	aerotaxis receptor
RA	2,573,558	G→A	10.2%	G105D (GGT→GAT)	PP_2257 →	aerotaxis receptor
RA	2,576,157	C→A	7.5%	A445D (GCC→GAC)	PP_2258 →	sensory box protein
RA	2,577,533	G→A	6.9%	H288Y (CAC→TAC)	PP_2259 ←	sigma‑54 dependent transcriptional regulator
RA	2,592,797	A→C	10.2%	K331T (AAG→ACG) ‡	PP_2270 →	DNA primase/helicase
RA	2,592,798	G→C	10.2%	K331N (AAG→AAC) ‡	PP_2270 →	DNA primase/helicase
RA	2,592,799	G→T	10.2%	V332L (GTG→TTG)	PP_2270 →	DNA primase/helicase
RA	2,592,806	A→T	10.2%	Y334F (TAC→TTC)	PP_2270 →	DNA primase/helicase
RA	2,595,165	C→A	12.5%	intergenic (+24/‑117)	PP_5511 → / → PP_2273	hypothetical protein/DNA polymerase I
RA	2,595,169	T→G	11.1%	intergenic (+28/‑113)	PP_5511 → / → PP_2273	hypothetical protein/DNA polymerase I
RA	2,595,170	G→T	11.1%	intergenic (+29/‑112)	PP_5511 → / → PP_2273	hypothetical protein/DNA polymerase I
RA	2,595,176	C→G	11.1%	intergenic (+35/‑106)	PP_5511 → / → PP_2273	hypothetical protein/DNA polymerase I
RA	2,595,177	C→G	11.1%	intergenic (+36/‑105)	PP_5511 → / → PP_2273	hypothetical protein/DNA polymerase I
RA	2,595,183	A→C	11.3%	intergenic (+42/‑99)	PP_5511 → / → PP_2273	hypothetical protein/DNA polymerase I
RA	2,595,184	C→A	11.1%	intergenic (+43/‑98)	PP_5511 → / → PP_2273	hypothetical protein/DNA polymerase I
RA	2,595,188	T→G	11.1%	intergenic (+47/‑94)	PP_5511 → / → PP_2273	hypothetical protein/DNA polymerase I
RA	2,605,721	Δ1 bp	7.1%	coding (231/2346 nt)	PP_2284 →	tail tubular protein B
RA	2,612,097	C→A	6.6%	L346I (CTC→ATC)	PP_2287 →	internal core protein
RA	2,623,199	A→G	6.1%	intergenic (+35/‑211)	PP_5517 → / → PP_2295	hypothetical protein/antirestriction protein
RA	2,630,704	G→A	8.0%	D57N (GAC→AAC)	lon‑II →	DNA‑binding ATP‑dependent protease
RA	2,631,141	C→G	7.5%	L202L (CTC→CTG)	lon‑II →	DNA‑binding ATP‑dependent protease
RA	2,631,145	C→G	7.7%	Q204E (CAG→GAG)	lon‑II →	DNA‑binding ATP‑dependent protease
RA	2,650,094	T→G	6.7%	intergenic (+33/+101)	PP_2320 → / ← oprI	hypothetical protein/major outer membrane lipoprotein
RA	2,651,770	C→T	8.1%	V216V (GTG→GTA)	aroF‑I ←	tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase
RA	2,656,158	G→C	6.7%	A11A (GCC→GCG)	cysH ←	phosphoadenosine phosphosulfate reductase
RA	2,656,162	A→C	6.5%	L10R (CTG→CGG) ‡	cysH ←	phosphoadenosine phosphosulfate reductase
RA	2,656,163	G→T	6.6%	L10M (CTG→ATG) ‡	cysH ←	phosphoadenosine phosphosulfate reductase
RA	2,656,167	G→C	6.9%	A8A (GCC→GCG)	cysH ←	phosphoadenosine phosphosulfate reductase
RA	2,658,381	C→G	6.9%	A140A (GCG→GCC)	PP_2330 ←	hypothetical protein
RA	2,669,671	T→G	10.7%	intergenic (+38/+37)	prpD → / ← acnB	2‑methylcitrate dehydratase/aconitate hydratase B
RA	2,669,674	C→A	10.3%	intergenic (+41/+34)	prpD → / ← acnB	2‑methylcitrate dehydratase/aconitate hydratase B
RA	2,670,284	G→A	9.3%	A678A (GCC→GCT)	acnB ←	aconitate hydratase B
RA	2,680,403	C→A	11.1%	P382T (CCA→ACA)  W284C (TGG→TGT)	PP_2349 → PP_2350 ←	CBS domain‑containing protein LysR family transcriptional regulator
RA	2,680,406	G→A	10.4%	A383T (GCG→ACG)  R283R (CGC→CGT)	PP_2349 → PP_2350 ←	CBS domain‑containing protein LysR family transcriptional regulator
RA	2,680,409	T→C	10.6%	L384L (TTG→CTG)  Q282Q (CAA→CAG)	PP_2349 → PP_2350 ←	CBS domain‑containing protein LysR family transcriptional regulator
RA	2,680,412	T→G	11.1%	*385G (TGA→GGA)  S281S (TCA→TCC)	PP_2349 → PP_2350 ←	CBS domain‑containing protein LysR family transcriptional regulator
RA	2,687,305	C→T	7.7%	A139A (GCG→GCA)	PP_2354 ←	two‑component system sensor histidine kinase/response regulator
RA	2,693,676	C→T	8.0%	D258D (GAC→GAT)	PP_2361 →	chaperone protein
RA	2,693,678	C→G	8.0%	A259G (GCC→GGC)	PP_2361 →	chaperone protein
RA	2,693,680	A→G	8.0%	I260V (ATC→GTC)	PP_2361 →	chaperone protein
RA	2,708,274	T→C	8.0%	E312G (GAG→GGG) ‡	cysI ←	sulfite reductase hemoprotein subunit beta
RA	2,708,275	C→G	7.7%	E312Q (GAG→CAG) ‡	cysI ←	sulfite reductase hemoprotein subunit beta
RA	2,708,280	T→C	7.5%	D310G (GAT→GGT)	cysI ←	sulfite reductase hemoprotein subunit beta
RA	2,711,994	A→G	5.9%	I1037T (ATC→ACC)	metH ←	cobalamin‑dependent methionine synthase
RA	2,719,331	A→G	7.3%	Q153R (CAG→CGG)	nfuA →	Fe/S biogenesis protein NfuA
RA	2,721,382	T→A	8.2%	intergenic (‑344/‑98)	PP_2381 ← / → PP_2382	hypothetical protein/putative transporter
RA	2,721,384	G→T	8.3%	intergenic (‑346/‑96)	PP_2381 ← / → PP_2382	hypothetical protein/putative transporter
RA	2,721,390	T→A	6.7%	intergenic (‑352/‑90)	PP_2381 ← / → PP_2382	hypothetical protein/putative transporter
RA	2,721,392	T→A	6.8%	intergenic (‑354/‑88)	PP_2381 ← / → PP_2382	hypothetical protein/putative transporter
RA	2,721,398	A→C	6.4%	intergenic (‑360/‑82)	PP_2381 ← / → PP_2382	hypothetical protein/putative transporter
RA	2,721,400	T→A	6.4%	intergenic (‑362/‑80)	PP_2381 ← / → PP_2382	hypothetical protein/putative transporter
RA	2,734,034	G→A	7.5%	R311H (CGC→CAC)	PP_2394 →	leucine‑rich repeat‑containing protein
RA	2,738,419	C→G	9.3%	F266L (TTC→TTG)	PP_2395 →	leucine‑rich repeat‑containing protein
RA	2,738,424	C→G	10.0%	T268R (ACG→AGG)	PP_2395 →	leucine‑rich repeat‑containing protein
RA	2,743,385	C→T	13.3%	R161C (CGC→TGC)	PP_2397 →	EF hand domain‑containing protein
RA	2,755,392	T→G	8.7%	L573R (CTG→CGG)	czcA‑II →	cation efflux system protein
RA	2,755,396	G→C	8.9%	Q574H (CAG→CAC)	czcA‑II →	cation efflux system protein
RA	2,758,053	T→C	6.3%	S47G (AGC→GGC)	PP_2411 ←	MFS transporter
RA	2,758,372	T→A	7.1%	*264C (TGA→TGT)	PP_2412 ←	ParA family protein
RA	2,765,215	C→G	13.3%	noncoding (9/199 nt)	PP_mr33 ←	Cobalamin regulatory region
RA	2,765,218	Δ1 bp	12.9%	noncoding (6/199 nt)	PP_mr33 ←	Cobalamin regulatory region
RA	2,765,224	A→C	12.4%	intergenic (‑1/+31)	PP_mr33 ← / ← PP_2419	Cobalamin regulatory region/membrane protein
RA	2,765,225	G→T	12.5%	intergenic (‑2/+30)	PP_mr33 ← / ← PP_2419	Cobalamin regulatory region/membrane protein
RA	2,765,230:1	+G	12.7%	intergenic (‑7/+25)	PP_mr33 ← / ← PP_2419	Cobalamin regulatory region/membrane protein
RA	2,765,233	C→G	9.8%	intergenic (‑10/+22)	PP_mr33 ← / ← PP_2419	Cobalamin regulatory region/membrane protein
RA	2,782,074	T→G	8.0%	T98P (ACC→CCC)	iscS‑II ←	cysteine desulfurase
RA	2,782,079	C→A	8.0%	G96V (GGC→GTC)	iscS‑II ←	cysteine desulfurase
RA	2,783,376	G→T	18.8%	A16E (GCG→GAG)	PP_2436 ←	LysR family transcriptional regulator
RA	2,786,403	G→A	13.8%	S89L (TCG→TTG)	alx ←	alkaline‑induced transporter
RA	2,788,078	T→A	12.1%	V134D (GTC→GAC)	ahpF →	alkyl hydroperoxide reductase subunit F
RA	2,788,084	A→G	10.9%	Q136R (CAG→CGG)	ahpF →	alkyl hydroperoxide reductase subunit F
RA	2,795,825	C→G	11.8%	E155Q (GAG→CAG)	puuB ←	gamma‑glutamylputrescine oxidase
RA	2,795,826	C→G	12.5%	L154L (CTG→CTC)	puuB ←	gamma‑glutamylputrescine oxidase
RA	2,799,171	A→G	10.6%	intergenic (‑185/+31)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,799,177	C→T	11.6%	intergenic (‑191/+25)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,799,180	A→G	11.3%	intergenic (‑194/+22)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,799,186	C→T	11.3%	intergenic (‑200/+16)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,812,775	C→T	9.7%	intergenic (+69/‑41)	rplT → / → pheS	50S ribosomal protein L20/phenylalanine‑‑tRNA ligase subunit alpha
RA	2,812,778	C→G	9.2%	intergenic (+72/‑38)	rplT → / → pheS	50S ribosomal protein L20/phenylalanine‑‑tRNA ligase subunit alpha
RA	2,812,781	A→G	9.2%	intergenic (+75/‑35)	rplT → / → pheS	50S ribosomal protein L20/phenylalanine‑‑tRNA ligase subunit alpha
RA	2,826,825	G→C	8.0%	A80P (GCA→CCA)	PP_2479 →	cytochrome c family protein
RA	2,826,830	G→C	8.0%	W81C (TGG→TGC)	PP_2479 →	cytochrome c family protein
RA	2,844,675	T→C	9.0%	intergenic (‑35/+45)	PP_2495 ← / ← PP_2496	hypothetical protein/hypothetical protein
RA	2,844,678	A→T	9.5%	intergenic (‑38/+42)	PP_2495 ← / ← PP_2496	hypothetical protein/hypothetical protein
RA	2,844,679	A→T	9.5%	intergenic (‑39/+41)	PP_2495 ← / ← PP_2496	hypothetical protein/hypothetical protein
RA	2,844,682	A→T	9.2%	intergenic (‑42/+38)	PP_2495 ← / ← PP_2496	hypothetical protein/hypothetical protein
RA	2,844,683	A→T	9.7%	intergenic (‑43/+37)	PP_2495 ← / ← PP_2496	hypothetical protein/hypothetical protein
RA	2,844,686	G→A	9.8%	intergenic (‑46/+34)	PP_2495 ← / ← PP_2496	hypothetical protein/hypothetical protein
RA	2,852,397	T→A	9.9%	Q312L (CAG→CTG)	PP_2505 ←	GAF domain/GGDEF domain‑containing protein
RA	2,860,448	C→T	8.9%	G295E (GGG→GAG)	gllD ←	4‑oxalomesaconate tautomerase
RA	2,869,095	T→A	6.9%	intergenic (+634/‑297)	PP_2520 → / → PP_2522	hypothetical protein/transposase
RA	2,880,503	G→A	8.0%	S115S (TCG→TCA)	PP_2535 →	transport protein
RA	2,884,812	C→G	7.1%	P93A (CCG→GCG) ‡	PP_2540 →	short‑chain dehydrogenase/reductase family oxidoreductase
RA	2,884,813	C→G	6.7%	P93R (CCG→CGG) ‡	PP_2540 →	short‑chain dehydrogenase/reductase family oxidoreductase
RA	2,887,552	G→A	8.9%	L373L (CTG→TTG)	PP_2542 ←	GntR family transcriptional regulator
RA	2,887,557	T→C	9.1%	K371R (AAG→AGG)	PP_2542 ←	GntR family transcriptional regulator
RA	2,887,559	G→C	9.1%	L370L (CTC→CTG) ‡	PP_2542 ←	GntR family transcriptional regulator
RA	2,887,561	G→A	9.7%	L370F (CTC→TTC) ‡	PP_2542 ←	GntR family transcriptional regulator
RA	2,887,563	T→C	9.8%	H369R (CAC→CGC)	PP_2542 ←	GntR family transcriptional regulator
RA	2,887,566	T→C	9.6%	K368R (AAG→AGG)	PP_2542 ←	GntR family transcriptional regulator
RA	2,890,383	G→A	14.9%	R464H (CGC→CAC)	gabP‑II →	gamma‑aminobutyrate permease
RA	2,899,164:1	+C	11.9%	coding (1389/1413 nt)	PP_2552 →	DOPA decarboxylase
RA	2,899,170	Δ1 bp	11.6%	coding (1395/1413 nt)	PP_2552 →	DOPA decarboxylase
RA	2,902,852	G→A	13.9%	intergenic (+26/+43)	quiC → / ← PP_2555	3‑dehydroshikimate dehydratase/hypothetical protein
RA	2,902,855	T→C	14.7%	intergenic (+29/+40)	quiC → / ← PP_2555	3‑dehydroshikimate dehydratase/hypothetical protein
RA	2,902,856	G→A	18.7%	intergenic (+30/+39)	quiC → / ← PP_2555	3‑dehydroshikimate dehydratase/hypothetical protein
RA	2,921,460	G→A	100%	G3494R (GGG→AGG)	PP_2561 →	hemolysin‑type calcium‑binding bacteriocin
RA	2,931,904	C→A	7.6%	G733V (GGC→GTC)	PP_2566 ←	leucine‑rich repeat‑containing protein
RA	2,931,907	T→A	8.7%	N732I (AAT→ATT)	PP_2566 ←	leucine‑rich repeat‑containing protein
RA	2,931,910	T→G	8.7%	D731A (GAC→GCC)	PP_2566 ←	leucine‑rich repeat‑containing protein
RA	2,941,552	Δ1 bp	7.1%	coding (784/912 nt)	PP_2574 →	LysR family transcriptional regulator
RA	2,941,556:1	+G	6.9%	coding (788/912 nt)	PP_2574 →	LysR family transcriptional regulator
RA	2,941,692	C→T	11.0%	intergenic (+12/+34)	PP_2574 → / ← PP_2575	LysR family transcriptional regulator/hypothetical protein
RA	2,941,695	C→T	10.0%	intergenic (+15/+31)	PP_2574 → / ← PP_2575	LysR family transcriptional regulator/hypothetical protein
RA	2,941,698	G→T	10.8%	intergenic (+18/+28)	PP_2574 → / ← PP_2575	LysR family transcriptional regulator/hypothetical protein
RA	2,941,701	A→C	8.5%	intergenic (+21/+25)	PP_2574 → / ← PP_2575	LysR family transcriptional regulator/hypothetical protein
RA	2,941,704	A→G	8.7%	intergenic (+24/+22)	PP_2574 → / ← PP_2575	LysR family transcriptional regulator/hypothetical protein
RA	2,941,707	A→G	8.9%	intergenic (+27/+19)	PP_2574 → / ← PP_2575	LysR family transcriptional regulator/hypothetical protein
RA	2,946,587	G→C	8.9%	P312R (CCG→CGG) ‡	yijP ←	phosphoethanolamine transferase CptA
RA	2,946,588	G→C	8.9%	P312A (CCG→GCG) ‡	yijP ←	phosphoethanolamine transferase CptA
RA	2,951,334	G→C	8.8%	intergenic (‑113/+48)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,951,341	A→C	11.9%	intergenic (‑120/+41)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,951,342	G→T	11.9%	intergenic (‑121/+40)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,951,349	G→C	7.3%	intergenic (‑128/+33)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,972,973	A→G	6.4%	C301R (TGT→CGT)	PP_2600 ←	hypothetical protein
RA	2,973,055	G→C	8.0%	F273L (TTC→TTG)	PP_2600 ←	hypothetical protein
RA	2,979,338	C→A	16.1%	G316V (GGG→GTG)	PP_2605 ←	hypothetical protein
RA	2,988,780	T→C	7.8%	K188E (AAA→GAA)	PP_2613 ←	hypothetical protein
RA	2,993,730	C→T	9.1%	G228R (GGG→AGG)	PP_2617 ←	hypothetical protein
RA	3,001,815	C→G	15.7%	A180G (GCC→GGC)	PP_2625 →	hypothetical protein
RA	3,001,821	G→A	16.6%	R182Q (CGG→CAG)	PP_2625 →	hypothetical protein
RA	3,001,824	G→C	16.6%	G183A (GGC→GCC)	PP_2625 →	hypothetical protein
RA	3,001,827	T→C	13.4%	L184P (CTG→CCG)	PP_2625 →	hypothetical protein
RA	3,001,833	C→G	14.6%	A186G (GCC→GGC)	PP_2625 →	hypothetical protein
RA	3,005,176	C→T	7.0%	A586V (GCC→GTC)	PP_2627 →	membrane protein
RA	3,007,598	G→A	8.5%	G499G (GGC→GGT)	PP_2628 ←	ABC transporter ATP‑binding protein
RA	3,018,622	G→T	6.3%	G87V (GGT→GTT)	bcsZ →	cellulose synthase endo‑1,4‑D‑glucanase subunit
RA	3,021,984	A→G	9.6%	E841G (GAG→GGG) ‡	PP_2638 →	cellulose synthase operon protein C
RA	3,021,985	G→C	10.9%	E841D (GAG→GAC) ‡	PP_2638 →	cellulose synthase operon protein C
RA	3,021,986	C→T	9.6%	P842S (CCG→TCG)	PP_2638 →	cellulose synthase operon protein C
RA	3,029,214	G→C	9.8%	L289F (TTG→TTC)	pcaY →	aromatic acid chemoreceptor
RA	3,033,537	C→G	8.6%	A26A (GCC→GCG)	PP_2646 →	hypothetical protein
RA	3,033,545	A→T	8.8%	D29V (GAC→GTC)	PP_2646 →	hypothetical protein
RA	3,037,048	A→G	8.3%	I180T (ATC→ACC)	PP_2649 ←	LysR family transcriptional regulator
RA	3,037,050	G→C	8.9%	V179V (GTC→GTG) ‡	PP_2649 ←	LysR family transcriptional regulator
RA	3,037,052	C→T	9.1%	V179I (GTC→ATC) ‡	PP_2649 ←	LysR family transcriptional regulator
RA	3,048,605	A→C	8.8%	intergenic (+60/‑236)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,065,510	C→A	6.1%	P150P (CCC→CCA)	PP_2677 →	hypothetical protein
RA	3,065,511	A→C	6.1%	S151R (AGC→CGC)	PP_2677 →	hypothetical protein
RA	3,065,514	G→T	6.0%	V152L (GTG→TTG) ‡	PP_2677 →	hypothetical protein
RA	3,065,515	T→G	6.1%	V152G (GTG→GGG) ‡	PP_2677 →	hypothetical protein
RA	3,078,131	A→G	5.9%	S379P (TCG→CCG)	PP_2688 ←	hypothetical protein
RA	3,078,133	G→C	6.0%	A378G (GCC→GGC)	PP_2688 ←	hypothetical protein
RA	3,078,135	G→C	6.3%	P377P (CCC→CCG) ‡	PP_2688 ←	hypothetical protein
RA	3,078,137	G→C	6.3%	P377A (CCC→GCC) ‡	PP_2688 ←	hypothetical protein
RA	3,078,139	C→T	6.2%	G376E (GGG→GAG)	PP_2688 ←	hypothetical protein
RA	3,081,126	G→C	7.1%	S463R (AGC→AGG) ‡	PP_2691 ←	hypothetical protein
RA	3,081,127	C→A	7.1%	S463I (AGC→ATC) ‡	PP_2691 ←	hypothetical protein
RA	3,081,130	T→G	6.8%	H462P (CAT→CCT) ‡	PP_2691 ←	hypothetical protein
RA	3,081,131	G→C	6.8%	H462D (CAT→GAT) ‡	PP_2691 ←	hypothetical protein
RA	3,081,134	A→G	6.4%	C461R (TGC→CGC)	PP_2691 ←	hypothetical protein
RA	3,104,676	T→A	8.9%	S402T (TCC→ACC)	PP_2714 →	sensor histidine kinase
RA	3,116,922	A→C	7.2%	L158R (CTC→CGC)	PP_2733 ←	membrane protein
RA	3,122,363	C→G	5.9%	G20A (GGC→GCC)	PP_2739 ←	sensory box protein
RA	3,131,369	C→G	8.5%	P83R (CCG→CGG)	PP_2748 →	ABC transporter ATP‑binding protein
RA	3,136,991	G→A	7.8%	V65I (GTT→ATT) ‡	PP_2753 →	ABC transporter ATP‑binding protein
RA	3,136,992	T→A	7.8%	V65D (GTT→GAT) ‡	PP_2753 →	ABC transporter ATP‑binding protein
RA	3,136,993	T→C	7.8%	V65V (GTT→GTC) ‡	PP_2753 →	ABC transporter ATP‑binding protein
RA	3,139,813	A→G	9.3%	S123G (AGC→GGC)	sfnB →	SfnB family sulfur acquisition oxidoreductase
RA	3,140,999	A→G	6.4%	E100G (GAA→GGA) ‡	PP_2756 →	hypothetical protein
RA	3,141,000	A→T	6.5%	E100D (GAA→GAT) ‡	PP_2756 →	hypothetical protein
RA	3,141,001	C→T	6.5%	P101S (CCG→TCG)	PP_2756 →	hypothetical protein
RA	3,141,006	A→G	7.3%	A102A (GCA→GCG)	PP_2756 →	hypothetical protein
RA	3,142,897	G→C	8.2%	Q282H (CAG→CAC)	PP_2758 →	ribose ABC transporter substrate‑binding protein
RA	3,142,899	C→A	8.2%	P283H (CCC→CAC)	PP_2758 →	ribose ABC transporter substrate‑binding protein
RA	3,142,901	G→T	8.2%	G284C (GGC→TGC)	PP_2758 →	ribose ABC transporter substrate‑binding protein
RA	3,142,909	G→C	9.8%	P286P (CCG→CCC)	PP_2758 →	ribose ABC transporter substrate‑binding protein
RA	3,142,910	G→C	8.2%	V287L (GTG→CTG)	PP_2758 →	ribose ABC transporter substrate‑binding protein
RA	3,142,918	A→C	7.6%	A289A (GCA→GCC)	PP_2758 →	ribose ABC transporter substrate‑binding protein
RA	3,142,920	T→G	7.8%	V290G (GTG→GGG)	PP_2758 →	ribose ABC transporter substrate‑binding protein
RA	3,142,922	G→C	7.8%	V291L (GTG→CTG)	PP_2758 →	ribose ABC transporter substrate‑binding protein
RA	3,148,464	T→G	9.5%	Y134* (TAT→TAG)	msuE →	FMN reductase
RA	3,148,465	C→G	9.5%	R135G (CGC→GGC)	msuE →	FMN reductase
RA	3,148,471	T→C	9.3%	S137P (TCC→CCC) ‡	msuE →	FMN reductase
RA	3,148,472	C→G	10.0%	S137C (TCC→TGC) ‡	msuE →	FMN reductase
RA	3,148,473	C→A	9.4%	S137S (TCC→TCA) ‡	msuE →	FMN reductase
RA	3,168,212	Δ1 bp	7.1%	coding (107/2880 nt)	PP_2782 →	class III pyridoxalphosphate dependent aminotransferase
RA	3,168,213	Δ1 bp	7.0%	coding (108/2880 nt)	PP_2782 →	class III pyridoxalphosphate dependent aminotransferase
RA	3,181,393	T→G	8.5%	V197G (GTT→GGT) ‡	PP_2791 →	aminoglycoside phosphotransferase
RA	3,181,394	T→A	8.5%	V197V (GTT→GTA) ‡	PP_2791 →	aminoglycoside phosphotransferase
RA	3,181,395	C→A	8.9%	P198T (CCG→ACG)	PP_2791 →	aminoglycoside phosphotransferase
RA	3,189,278	G→C	11.8%	L458V (CTG→GTG)	PP_2799 ←	class III aminotransferase
RA	3,189,279	G→C	10.9%	H457Q (CAC→CAG)	PP_2799 ←	class III aminotransferase
RA	3,200,671	G→A	9.7%	intergenic (+19/‑2)	PP_2807 → / → PP_2808	hypothetical protein/oxidoreductase
RA	3,201,399	C→T	6.9%	L243L (CTG→TTG)	PP_2808 →	oxidoreductase
RA	3,206,285	A→T	7.8%	Y530F (TAC→TTC)	PP_2811 →	hypothetical protein
RA	3,206,359	G→A	8.1%	G3D (GGT→GAT)	PP_2812 →	transporter
RA	3,210,076	T→G	11.9%	N217T (AAC→ACC)	PP_2814 ←	hypothetical protein
RA	3,210,081	C→G	11.7%	G215G (GGG→GGC) ‡	PP_2814 ←	hypothetical protein
RA	3,210,082	C→G	11.4%	G215A (GGG→GCG) ‡	PP_2814 ←	hypothetical protein
RA	3,210,083	C→G	11.7%	G215R (GGG→CGG) ‡	PP_2814 ←	hypothetical protein
RA	3,210,088	C→A	10.8%	G213V (GGT→GTT)	PP_2814 ←	hypothetical protein
RA	3,214,890	A→G	6.9%	M269V (ATG→GTG)	mexD →	multidrug RND transporter MexD
RA	3,218,661:1	+C	15.8%	intergenic (+44/+39)	oprJ → / ← nfxB	outer membrane protein OprJ/HTH‑type transcriptional regulator NfxB
RA	3,218,668	Δ1 bp	15.4%	intergenic (+51/+32)	oprJ → / ← nfxB	outer membrane protein OprJ/HTH‑type transcriptional regulator NfxB
RA	3,222,096	A→G	5.9%	Y200H (TAC→CAC)	PP_2823 ←	methyl‑accepting chemotaxis transducer
RA	3,252,492	G→A	18.8%	intergenic (+22/+221)	ureG → / ← PP_2851	urease accessory protein/hypothetical protein
RA	3,252,497	T→C	19.6%	intergenic (+27/+216)	ureG → / ← PP_2851	urease accessory protein/hypothetical protein
RA	3,266,111	G→C	9.3%	intergenic (+28/+31)	PP_2863 → / ← PP_2864	membrane protein/hypothetical protein
RA	3,266,113	A→T	8.9%	intergenic (+30/+29)	PP_2863 → / ← PP_2864	membrane protein/hypothetical protein
RA	3,266,114	A→T	8.9%	intergenic (+31/+28)	PP_2863 → / ← PP_2864	membrane protein/hypothetical protein
RA	3,266,116	G→C	8.9%	intergenic (+33/+26)	PP_2863 → / ← PP_2864	membrane protein/hypothetical protein
RA	3,268,302	T→G	7.4%	K371Q (AAG→CAG)	PP_2867 ←	pyridine nucleotide‑disulphide oxidoreductase family protein
RA	3,273,641	G→C	5.6%	G106A (GGC→GCC)	PP_2871 →	class II aldolase/adducin domain‑containing protein
RA	3,281,139	G→T	6.6%	A141S (GCT→TCT) ‡	PP_2881 →	short‑chain dehydrogenase/reductase family oxidoreductase
RA	3,281,140	C→G	6.8%	A141G (GCT→GGT) ‡	PP_2881 →	short‑chain dehydrogenase/reductase family oxidoreductase
RA	3,281,143	C→G	6.7%	T142R (ACA→AGA) ‡	PP_2881 →	short‑chain dehydrogenase/reductase family oxidoreductase
RA	3,281,144	A→C	6.2%	T142T (ACA→ACC) ‡	PP_2881 →	short‑chain dehydrogenase/reductase family oxidoreductase
RA	3,287,276	T→C	22.6%	intergenic (+17/+24)	PP_2889 → / ← xthA	transmembrane regulator PrtR/exodeoxyribonuclease III/apurinic/apyrimidinic endodeoxyribonuclease VI
RA	3,287,277	G→A	22.6%	intergenic (+18/+23)	PP_2889 → / ← xthA	transmembrane regulator PrtR/exodeoxyribonuclease III/apurinic/apyrimidinic endodeoxyribonuclease VI
RA	3,299,965	A→G	7.5%	S728G (AGT→GGT)	pvdQ →	acyl‑homoserine lactone acylase PvdQ
RA	3,300,162	T→A	11.4%	intergenic (+60/+22)	pvdQ → / ← lpxH	acyl‑homoserine lactone acylase PvdQ/UDP‑2,3‑diacylglucosamine hydrolase
RA	3,300,163	T→A	11.4%	intergenic (+61/+21)	pvdQ → / ← lpxH	acyl‑homoserine lactone acylase PvdQ/UDP‑2,3‑diacylglucosamine hydrolase
RA	3,305,308	A→G	6.4%	L288S (TTG→TCG)	PP_2906 ←	sensor histidine kinase
RA	3,317,213	C→G	9.2%	P608P (CCG→CCC)	treSA ←	trehalose synthase A
RA	3,332,008	G→C	8.7%	intergenic (‑7/+179)	nspC ← / ← PP_2930	carboxynorspermidine/carboxyspermidine decarboxylase/L‑serine dehydratase
RA	3,353,153	C→T	7.8%	G161D (GGC→GAC)	PP_2948 ←	GntR family transcriptional regulator
RA	3,368,609	Δ1 bp	7.7%	coding (1915/3015 nt)	PP_2964 →	transposase
RA	3,372,120	T→C	8.0%	intergenic (‑48/‑71)	csoR ← / → PP_2970	copper utilization transcriptional regulator/hypothetical protein
RA	3,372,121	G→C	8.8%	intergenic (‑49/‑70)	csoR ← / → PP_2970	copper utilization transcriptional regulator/hypothetical protein
RA	3,372,122	G→A	8.7%	intergenic (‑50/‑69)	csoR ← / → PP_2970	copper utilization transcriptional regulator/hypothetical protein
RA	3,380,536	A→G	6.6%	N70D (AAC→GAC)	tnpT‑I →	cointegrate resolution protein T
RA	3,380,540	T→A	6.9%	L71Q (CTG→CAG)	tnpT‑I →	cointegrate resolution protein T
RA	3,380,544	C→T	6.6%	V72V (GTC→GTT)	tnpT‑I →	cointegrate resolution protein T
RA	3,381,973	T→C	10.2%	Y207H (TAC→CAC)	PP_2983 →	hypothetical protein
RA	3,404,918	G→A	6.2%	C90Y (TGC→TAC)	PP_3016 →	lipopolysaccharide core biosynthesis protein
RA	3,423,566	A→G	7.7%	Q575R (CAG→CGG)	PP_3038 →	TraC domain‑containing protein
RA	3,426,491	A→T	11.6%	D147V (GAC→GTC) ‡	PP_3042 →	terminase large subunit
RA	3,426,492	C→G	10.0%	D147E (GAC→GAG) ‡	PP_3042 →	terminase large subunit
RA	3,426,493	A→T	9.9%	T148S (ACC→TCC)	PP_3042 →	terminase large subunit
RA	3,426,500	A→T	8.6%	E150V (GAA→GTA)	PP_3042 →	terminase large subunit
RA	3,428,056	A→T	8.3%	S669C (AGC→TGC)	PP_3042 →	terminase large subunit
RA	3,428,060	C→G	8.3%	S670C (TCC→TGC) ‡	PP_3042 →	terminase large subunit
RA	3,428,061	C→G	8.9%	S670S (TCC→TCG) ‡	PP_3042 →	terminase large subunit
RA	3,428,065	A→T	8.8%	S672C (AGC→TGC)	PP_3042 →	terminase large subunit
RA	3,432,707	G→A	7.9%	G14E (GGG→GAG)	PP_3049 →	hypothetical protein
RA	3,432,709	T→A	7.8%	L15M (TTG→ATG) ‡	PP_3049 →	hypothetical protein
RA	3,432,711	G→C	7.5%	L15F (TTG→TTC) ‡	PP_3049 →	hypothetical protein
RA	3,432,713	T→A	7.4%	I16N (ATC→AAC)	PP_3049 →	hypothetical protein
RA	3,432,715	T→C	7.8%	S17P (TCG→CCG)	PP_3049 →	hypothetical protein
RA	3,436,195	T→A	5.4%	W44R (TGG→AGG)	gpI →	tail formation protein
RA	3,436,199	T→C	5.4%	L45P (CTG→CCG) ‡	gpI →	tail formation protein
RA	3,436,200	G→A	5.4%	L45L (CTG→CTA) ‡	gpI →	tail formation protein
RA	3,436,204	T→A	5.3%	W47R (TGG→AGG)	gpI →	tail formation protein
RA	3,436,301	C→A	7.1%	T79K (ACG→AAG)	gpI →	tail formation protein
RA	3,439,047	C→G	5.7%	intergenic (+63/‑32)	PP_3058 → / → PP_3059	hypothetical protein/tail sheath protein
RA	3,439,049	C→G	6.0%	intergenic (+65/‑30)	PP_3058 → / → PP_3059	hypothetical protein/tail sheath protein
RA	3,439,051	C→G	6.0%	intergenic (+67/‑28)	PP_3058 → / → PP_3059	hypothetical protein/tail sheath protein
RA	3,453,480	A→G	10.7%	intergenic (‑34/+79)	PP_3069 ← / ← ppiC‑I	outer membrane autotransporter/peptidyl‑prolyl cis‑trans isomerase C
RA	3,455,566	C→G	7.6%	D109H (GAC→CAC)	aacs ←	acetoacetyl‑CoA synthetase
RA	3,455,567	T→G	7.6%	E108D (GAA→GAC)	aacs ←	acetoacetyl‑CoA synthetase
RA	3,455,581	C→A	7.8%	V104F (GTC→TTC)	aacs ←	acetoacetyl‑CoA synthetase
RA	3,455,582	C→G	7.8%	V103V (GTG→GTC)	aacs ←	acetoacetyl‑CoA synthetase
RA	3,457,578	G→A	7.7%	S371S (TCC→TCT)	bhbP ←	D‑beta‑hydroxybutyrate permease
RA	3,466,055	G→C	6.1%	noncoding (105/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,490,090	G→A	8.0%	A434V (GCG→GTG)	clpV ←	protein ClpV1
RA	3,491,957	A→C	5.7%	N154K (AAT→AAG)	PP_3096 ←	hypothetical protein
RA	3,497,329	Δ1 bp	9.1%	coding (268/765 nt)	PP_5562 ←	hypothetical protein
RA	3,497,333	G→C	8.7%	V88V (GTC→GTG)	PP_5562 ←	hypothetical protein
RA	3,497,336:1	+G	8.5%	coding (261/765 nt)	PP_5562 ←	hypothetical protein
RA	3,497,885	A→G	8.0%	intergenic (‑289/+417)	PP_5562 ← / ← PP_5563	hypothetical protein/membrane protein
RA	3,498,241	G→A	8.7%	intergenic (‑645/+61)	PP_5562 ← / ← PP_5563	hypothetical protein/membrane protein
RA	3,507,746	T→G	8.0%	F32C (TTC→TGC) ‡	PP_3105 →	membrane protein
RA	3,507,747	C→A	8.3%	F32L (TTC→TTA) ‡	PP_3105 →	membrane protein
RA	3,510,734	T→G	6.7%	D165E (GAT→GAG)	PP_5575 →	hypothetical protein
RA	3,510,737	C→A	6.7%	I166I (ATC→ATA)	PP_5575 →	hypothetical protein
RA	3,532,631	T→G	9.7%	A184A (GCA→GCC)	PP_3121 ←	transcriptional regulator, LysR family
RA	3,532,634	C→A	9.5%	W183C (TGG→TGT)	PP_3121 ←	transcriptional regulator, LysR family
RA	3,534,762	T→G	9.3%	intergenic (+49/‑106)	atoB → / → PP_3124	3‑oxoacid CoA‑transferase subunit B/short chain fatty acid transporter
RA	3,534,767	A→C	9.1%	intergenic (+54/‑101)	atoB → / → PP_3124	3‑oxoacid CoA‑transferase subunit B/short chain fatty acid transporter
RA	3,534,768	C→A	9.1%	intergenic (+55/‑100)	atoB → / → PP_3124	3‑oxoacid CoA‑transferase subunit B/short chain fatty acid transporter
RA	3,534,771	T→G	9.1%	intergenic (+58/‑97)	atoB → / → PP_3124	3‑oxoacid CoA‑transferase subunit B/short chain fatty acid transporter
RA	3,534,772	G→T	9.1%	intergenic (+59/‑96)	atoB → / → PP_3124	3‑oxoacid CoA‑transferase subunit B/short chain fatty acid transporter
RA	3,534,777	C→A	9.4%	intergenic (+64/‑91)	atoB → / → PP_3124	3‑oxoacid CoA‑transferase subunit B/short chain fatty acid transporter
RA	3,539,407	G→A	5.5%	A32T (GCC→ACC)	PP_3127 →	exopolysaccharide transport protein
RA	3,546,931	G→A	6.8%	V10V (GTC→GTT)	PP_3131 ←	membrane protein
RA	3,549,920	C→G	6.1%	H418D (CAC→GAC) ‡	PP_3133 →	oxidoreductase
RA	3,549,921	A→T	6.2%	H418L (CAC→CTC) ‡	PP_3133 →	oxidoreductase
RA	3,549,922	C→G	6.2%	H418Q (CAC→CAG) ‡	PP_3133 →	oxidoreductase
RA	3,553,793	C→T	11.6%	R154C (CGC→TGC)	PP_3138 →	VirK domain‑containing protein
RA	3,553,796	A→G	11.1%	S155G (AGC→GGC)	PP_3138 →	VirK domain‑containing protein
RA	3,553,797:1	+C	11.9%	coding (464/1002 nt)	PP_3138 →	VirK domain‑containing protein
RA	3,559,123	A→G	8.5%	*474W (TGA→TGG)	PP_3142 →	sugar transferase
RA	3,587,622:1	+A	11.1%	coding (458/915 nt)	catA‑II →	catechol 1,2‑dioxygenase
RA	3,593,872	G→A	8.9%	C303Y (TGC→TAC)	PP_3171 →	hypothetical protein
RA	3,596,326	C→G	7.7%	R227P (CGG→CCG)	nemA ←	FMN‑linked N‑ethylmaleimide reductase
RA	3,606,996	C→A	8.0%	V707V (GTG→GTT)	PP_3182 ←	GGDEF domain‑containing protein
RA	3,623,786	C→A	7.8%	L89L (CTG→CTT)	PP_3194 ←	hypothetical protein
RA	3,628,082	C→G	9.5%	intergenic (+11/‑129)	PP_3198 → / → PP_3199	2Fe‑2S ferredoxin/monooxygenase
RA	3,649,393	C→G	9.2%	intergenic (+870/+821)	PP_3214 → / ← PP_3216	hypothetical protein/cysteine dioxygenase
RA	3,649,395	G→C	7.7%	intergenic (+872/+819)	PP_3214 → / ← PP_3216	hypothetical protein/cysteine dioxygenase
RA	3,649,397	G→C	8.0%	intergenic (+874/+817)	PP_3214 → / ← PP_3216	hypothetical protein/cysteine dioxygenase
RA	3,649,399	G→C	7.7%	intergenic (+876/+815)	PP_3214 → / ← PP_3216	hypothetical protein/cysteine dioxygenase
RA	3,649,401	C→G	7.7%	intergenic (+878/+813)	PP_3214 → / ← PP_3216	hypothetical protein/cysteine dioxygenase
RA	3,667,282	T→C	6.9%	intergenic (+225/+37)	PP_3230 → / ← PP_3231	phosphoribosyl transferase domain‑containing protein/hypothetical protein
RA	3,694,029	T→G	7.0%	R713R (CGA→CGC) ‡	ligD ←	DNA ligase D
RA	3,694,030	C→A	6.9%	R713L (CGA→CTA) ‡	ligD ←	DNA ligase D
RA	3,701,978	C→T	6.1%	D136D (GAC→GAT)	PP_3267 →	Clp protease
RA	3,701,985	C→A	6.2%	L139M (CTG→ATG) ‡	PP_3267 →	Clp protease
RA	3,701,987	G→A	6.1%	L139L (CTG→CTA) ‡	PP_3267 →	Clp protease
RA	3,701,988	T→C	6.3%	Y140H (TAT→CAT) ‡	PP_3267 →	Clp protease
RA	3,701,990	T→G	6.3%	Y140* (TAT→TAG) ‡	PP_3267 →	Clp protease
RA	3,701,997	A→G	6.8%	I143V (ATC→GTC)	PP_3267 →	Clp protease
RA	3,703,061	T→C	9.4%	intergenic (+49/‑116)	PP_3269 → / → PP_5596	hypothetical protein/hypothetical protein
RA	3,703,067	T→C	8.7%	intergenic (+55/‑110)	PP_3269 → / → PP_5596	hypothetical protein/hypothetical protein
RA	3,703,068	A→G	8.9%	intergenic (+56/‑109)	PP_3269 → / → PP_5596	hypothetical protein/hypothetical protein
RA	3,703,072	G→A	8.7%	intergenic (+60/‑105)	PP_3269 → / → PP_5596	hypothetical protein/hypothetical protein
RA	3,703,078	G→A	8.3%	intergenic (+66/‑99)	PP_3269 → / → PP_5596	hypothetical protein/hypothetical protein
RA	3,704,190	C→A	5.8%	S604S (TCG→TCT)	paaZ ←	bifunctional oxepin‑CoA hydrolase/3‑oxo‑5,6‑dehydrosuberyl‑CoA semialdehyde dehydrogenase
RA	3,718,101	C→G	7.8%	L164L (CTG→CTC)	paaG ←	2‑(1,2‑epoxy‑1,2‑dihydrophenyl)acetyl‑CoA isomerase
RA	3,723,683	G→T	6.1%	intergenic (+13/+17)	PP_3288 → / ← PP_3289	universal stress protein family protein/acetyltransferase
RA	3,731,846	A→G	7.9%	R465R (CGT→CGC)	PP_3299 ←	lipoprotein
RA	3,735,139	Δ1 bp	11.9%	coding (36/3093 nt)	PP_3302 →	RND family transporter
RA	3,735,143:1	+T	12.8%	coding (40/3093 nt)	PP_3302 →	RND family transporter
RA	3,758,230	G→A	7.7%	M181I (ATG→ATA)	hemBB →	porphobilinogen synthase
RA	3,761,053	G→A	7.0%	S134N (AGC→AAC)	PP_3325 →	ferric siderophore receptor
RA	3,763,502	A→G	10.8%	intergenic (+22/+1653)	PP_3326 → / ← PP_3328	hypothetical protein/ring‑cleaving dioxygenase
RA	3,763,504	G→C	10.9%	intergenic (+24/+1651)	PP_3326 → / ← PP_3328	hypothetical protein/ring‑cleaving dioxygenase
RA	3,763,506	C→T	11.4%	intergenic (+26/+1649)	PP_3326 → / ← PP_3328	hypothetical protein/ring‑cleaving dioxygenase
RA	3,769,985	C→T	9.3%	G524G (GGC→GGT)	PP_3330 →	ferric siderophore receptor
RA	3,782,988	C→T	6.2%	Q27* (CAG→TAG)	nikD →	nickel ABC transporter ATP‑binding protein
RA	3,788,503	G→C	8.7%	Y44* (TAC→TAG)	PP_3350 ←	hypothetical protein
RA	3,788,526	Δ1 bp	100%	coding (109/1392 nt)	PP_3350 ←	hypothetical protein
RA	3,791,405	C→G	8.7%	G283G (GGC→GGG)	PP_3353 →	sulfatase‑modifying protein
RA	3,791,410	C→G	8.3%	A285G (GCC→GGC)	PP_3353 →	sulfatase‑modifying protein
RA	3,800,129	T→G	8.2%	L155R (CTG→CGG)	PP_3360 →	membrane protein
RA	3,845,703:1	+G	100%	intergenic (‑70/+28)	PP_3394 ← / ← PP_3395	3‑hydroxy‑3‑methylglutaryl‑CoA lyase/LysR family transcriptional regulator
RA	3,850,064	G→A	9.1%	G610D (GGC→GAC)	PP_3397 →	hypothetical protein
RA	3,857,611	T→G	8.9%	L63L (CTT→CTG)  noncoding (69/224 nt)	PP_3407 → PP_mr41 →	hypothetical protein Cobalamin regulatory region
RA	3,857,613	A→T	9.3%	Q64L (CAG→CTG)  noncoding (71/224 nt)	PP_3407 → PP_mr41 →	hypothetical protein Cobalamin regulatory region
RA	3,857,615	C→A	9.3%	Q65K (CAG→AAG)  noncoding (73/224 nt)	PP_3407 → PP_mr41 →	hypothetical protein Cobalamin regulatory region
RA	3,862,183	A→G	7.0%	Y369C (TAT→TGT)	PP_3413 →	two‑component system sensor histidine kinase/response regulator
RA	3,882,380	T→A	6.3%	F347I (TTC→ATC)	oprN →	multidrug RND transporter outer membrane protein OprN
RA	3,911,962	G→C	6.7%	R103P (CGC→CCC)	PP_3452 →	GGDEF domain‑containing protein
RA	3,911,964	C→A	5.8%	L104M (CTG→ATG) ‡	PP_3452 →	GGDEF domain‑containing protein
RA	3,911,965	T→G	7.0%	L104R (CTG→CGG) ‡	PP_3452 →	GGDEF domain‑containing protein
RA	3,914,848	G→C	7.9%	intergenic (‑62/‑184)	PP_3454 ← / → PP_3455	transcriptional regulator/multidrug RND transporter membrane fusion protein
RA	3,914,851	G→A	7.9%	intergenic (‑65/‑181)	PP_3454 ← / → PP_3455	transcriptional regulator/multidrug RND transporter membrane fusion protein
RA	3,914,853	A→G	7.6%	intergenic (‑67/‑179)	PP_3454 ← / → PP_3455	transcriptional regulator/multidrug RND transporter membrane fusion protein
RA	3,914,856	T→G	8.1%	intergenic (‑70/‑176)	PP_3454 ← / → PP_3455	transcriptional regulator/multidrug RND transporter membrane fusion protein
RA	3,914,857	C→A	8.1%	intergenic (‑71/‑175)	PP_3454 ← / → PP_3455	transcriptional regulator/multidrug RND transporter membrane fusion protein
RA	3,914,860	C→T	8.0%	intergenic (‑74/‑172)	PP_3454 ← / → PP_3455	transcriptional regulator/multidrug RND transporter membrane fusion protein
RA	3,914,862	T→C	7.8%	intergenic (‑76/‑170)	PP_3454 ← / → PP_3455	transcriptional regulator/multidrug RND transporter membrane fusion protein
RA	3,914,865	G→C	7.7%	intergenic (‑79/‑167)	PP_3454 ← / → PP_3455	transcriptional regulator/multidrug RND transporter membrane fusion protein
RA	3,915,792	C→G	8.0%	A254G (GCC→GGC) ‡	PP_3455 →	multidrug RND transporter membrane fusion protein
RA	3,915,793	C→G	8.0%	A254A (GCC→GCG) ‡	PP_3455 →	multidrug RND transporter membrane fusion protein
RA	3,915,796	C→G	7.9%	Y255* (TAC→TAG)	PP_3455 →	multidrug RND transporter membrane fusion protein
RA	3,915,797	C→G	8.0%	P256A (CCG→GCG)	PP_3455 →	multidrug RND transporter membrane fusion protein
RA	3,924,517	G→A	9.2%	T99T (ACC→ACT) ‡	peaB ←	quinohemoprotein amine dehydrogenase modification protein
RA	3,924,518	G→C	9.1%	T99S (ACC→AGC) ‡	peaB ←	quinohemoprotein amine dehydrogenase modification protein
RA	3,924,519	T→C	9.1%	T99A (ACC→GCC) ‡	peaB ←	quinohemoprotein amine dehydrogenase modification protein
RA	3,924,526	G→A	7.5%	V96V (GTC→GTT)	peaB ←	quinohemoprotein amine dehydrogenase modification protein
RA	3,935,336	T→C	7.5%	E26G (GAA→GGA)	PP_3467 ←	sigma‑54 dependent transcriptional regulator
RA	3,943,010	G→A	10.1%	L295F (CTC→TTC)	PP_3478 ←	secretion protein
RA	3,943,412	T→C	6.6%	T161A (ACC→GCC)	PP_3478 ←	secretion protein
RA	3,949,092	Δ1 bp	8.8%	coding (442/642 nt)	PP_3485 ←	hypothetical protein
RA	3,949,097	G→A	8.7%	P146L (CCG→CTG)	PP_3485 ←	hypothetical protein
RA	3,949,101:1	+A	8.5%	coding (433/642 nt)	PP_3485 ←	hypothetical protein
RA	3,949,108	Δ1 bp	7.9%	coding (426/642 nt)	PP_3485 ←	hypothetical protein
RA	3,949,113	T→C	8.0%	S141G (AGC→GGC)	PP_3485 ←	hypothetical protein
RA	3,949,600	G→T	7.0%	P479P (CCC→CCA) ‡	PP_3486 ←	cytochrome c
RA	3,949,602	G→C	6.7%	P479A (CCC→GCC) ‡	PP_3486 ←	cytochrome c
RA	3,949,604	A→C	6.9%	L478R (CTG→CGG)	PP_3486 ←	cytochrome c
RA	3,951,159	T→C	100%	intergenic (‑123/+72)	PP_3486 ← / ← PP_3487	cytochrome c/hypothetical protein
RA	3,951,161	A→T	100%	intergenic (‑125/+70)	PP_3486 ← / ← PP_3487	cytochrome c/hypothetical protein
RA	3,954,825	T→C	8.0%	N1854D (AAC→GAC)	mnxG ←	manganese‑oxidizing multicopper oxidase
RA	3,976,607	C→T	8.7%	A87A (GCG→GCA)	PP_3506 ←	magnesium chelatase subunit ChII
RA	3,996,246	C→A	8.2%	S94Y (TCC→TAC)	PP_3523 →	hypothetical protein
RA	4,000,135	C→T	10.7%	Q274* (CAG→TAG) ‡	PP_3528 →	ABC transporter substrate‑binding protein
RA	4,000,136	A→G	10.3%	Q274R (CAG→CGG) ‡	PP_3528 →	ABC transporter substrate‑binding protein
RA	4,002,682	A→G	7.0%	intergenic (+29/‑61)	allE → / → PP_3531	S‑ureidoglycine aminohydrolase/hypothetical protein
RA	4,002,683	C→G	7.1%	intergenic (+30/‑60)	allE → / → PP_3531	S‑ureidoglycine aminohydrolase/hypothetical protein
RA	4,002,684	C→T	7.1%	intergenic (+31/‑59)	allE → / → PP_3531	S‑ureidoglycine aminohydrolase/hypothetical protein
RA	4,006,733	C→A	6.0%	A381A (GCG→GCT)	PP_3535 ←	gamma‑glutamyltransferase
RA	4,013,749	T→A	6.6%	I123F (ATC→TTC)	PP_3541 ←	MgtC family transporter
RA	4,021,365	C→G	14.0%	*314S (TGA→TCA)	PP_3547 ←	NAD(P)‑binding oxidoreductase
RA	4,049,907	A→G	20.2%	intergenic (+40/‑61)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,049,910	C→G	19.6%	intergenic (+43/‑58)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,049,913	C→T	19.5%	intergenic (+46/‑55)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,054,193:1	+T	6.5%	coding (767/1320 nt)	PP_3573 →	monooxygenase
RA	4,054,198	Δ1 bp	6.2%	coding (772/1320 nt)	PP_3573 →	monooxygenase
RA	4,058,488	C→T	7.3%	L62L (TTG→TTA) ‡	PP_3576 ←	transmembrane sensor
RA	4,058,489	A→T	7.3%	L62* (TTG→TAG) ‡	PP_3576 ←	transmembrane sensor
RA	4,058,490	A→G	7.3%	L62L (TTG→CTG) ‡	PP_3576 ←	transmembrane sensor
RA	4,060,386	G→T	12.6%	T171T (ACC→ACA)	pgm ←	phosphoglucomutase
RA	4,062,307	C→G	8.2%	E678Q (GAG→CAG)	PP_3581 ←	membrane protein
RA	4,062,312	G→A	11.4%	P676L (CCG→CTG)	PP_3581 ←	membrane protein
RA	4,062,315	A→C	10.4%	V675G (GTG→GGG)	PP_3581 ←	membrane protein
RA	4,062,318	G→T	10.6%	P674H (CCC→CAC)	PP_3581 ←	membrane protein
RA	4,062,321	T→C	10.4%	Q673R (CAG→CGG)	PP_3581 ←	membrane protein
RA	4,081,788	G→A	7.8%	P50P (CCC→CCT)	dpkA ←	delta 1‑piperideine‑2‑carboxylate reductase
RA	4,085,613	C→T	7.8%	G104G (GGC→GGT)	amaD →	D‑lysine oxidase
RA	4,089,943	T→C	7.7%	intergenic (+98/‑7)	kdgD → / → gudP	5‑dehydro‑4‑deoxyglucarate dehydratase/glucarate transporter
RA	4,091,327	G→A	7.5%	intergenic (+13/‑65)	gudP → / → garD	glucarate transporter/galactarate dehydratase
RA	4,091,328	C→T	7.5%	intergenic (+14/‑64)	gudP → / → garD	glucarate transporter/galactarate dehydratase
RA	4,091,335	T→C	7.9%	intergenic (+21/‑57)	gudP → / → garD	glucarate transporter/galactarate dehydratase
RA	4,091,336	C→G	7.8%	intergenic (+22/‑56)	gudP → / → garD	glucarate transporter/galactarate dehydratase
RA	4,091,337	G→A	7.8%	intergenic (+23/‑55)	gudP → / → garD	glucarate transporter/galactarate dehydratase
RA	4,091,344	A→G	9.2%	intergenic (+30/‑48)	gudP → / → garD	glucarate transporter/galactarate dehydratase
RA	4,091,345	T→C	9.5%	intergenic (+31/‑47)	gudP → / → garD	glucarate transporter/galactarate dehydratase
RA	4,094,261	A→G	7.7%	T420A (ACC→GCC)	PP_3602 →	2,5‑dioxovalerate dehydrogenase
RA	4,096,649	T→G	6.5%	S86A (TCG→GCG) ‡	PP_5608 →	hypothetical protein
RA	4,096,650	C→A	6.6%	S86* (TCG→TAG) ‡	PP_5608 →	hypothetical protein
RA	4,100,833	G→C	7.7%	W236S (TGG→TCG)	PP_3608 →	LysR family transcriptional regulator
RA	4,100,839	C→T	8.3%	A238V (GCG→GTG)	PP_3608 →	LysR family transcriptional regulator
RA	4,122,670:1	+G	8.9%	intergenic (‑35/+16)	PP_3625 ← / ← PP_3626	LysE family transporter/hypothetical protein
RA	4,122,677	Δ1 bp	8.7%	intergenic (‑42/+9)	PP_3625 ← / ← PP_3626	LysE family transporter/hypothetical protein
RA	4,130,690	G→A	6.8%	A97T (GCC→ACC)	PP_3634 →	GNAT family acetyltransferase
RA	4,167,515	C→G	7.5%	intergenic (‑40/+122)	creA ← / ← katG	creatinase/catalase‑peroxidase
RA	4,167,517	G→C	7.5%	intergenic (‑42/+120)	creA ← / ← katG	creatinase/catalase‑peroxidase
RA	4,170,180	T→G	12.9%	intergenic (‑288/‑99)	katG ← / → PP_3669	catalase‑peroxidase/LysR family transcriptional regulator
RA	4,170,182	A→T	12.9%	intergenic (‑290/‑97)	katG ← / → PP_3669	catalase‑peroxidase/LysR family transcriptional regulator
RA	4,170,183	A→T	12.9%	intergenic (‑291/‑96)	katG ← / → PP_3669	catalase‑peroxidase/LysR family transcriptional regulator
RA	4,170,185	C→A	11.5%	intergenic (‑293/‑94)	katG ← / → PP_3669	catalase‑peroxidase/LysR family transcriptional regulator
RA	4,172,648	G→A	6.9%	A94A (GCG→GCA)	PP_3671 →	aldo/keto reductase family oxidoreductase
RA	4,208,773	C→T	7.0%	A242A (GCC→GCT)	PP_3692 →	hypothetical protein
RA	4,226,666	T→C	6.8%	I78V (ATC→GTC)	PP_5623 ←	membrane protein
RA	4,240,994	C→G	7.5%	M235I (ATG→ATC)	PP_3718 ←	aminotransferase
RA	4,240,997	G→C	7.4%	I234M (ATC→ATG)	PP_3718 ←	aminotransferase
RA	4,274,412	C→G	9.7%	R123R (CGC→CGG)	glcD →	glycolate oxidase FAD‑linked subunit
RA	4,274,413	G→T	9.6%	V124L (GTG→TTG)	glcD →	glycolate oxidase FAD‑linked subunit
RA	4,274,418	A→C	9.6%	Q125H (CAA→CAC)	glcD →	glycolate oxidase FAD‑linked subunit
RA	4,274,419	C→G	9.3%	P126A (CCG→GCG)	glcD →	glycolate oxidase FAD‑linked subunit
RA	4,280,048	C→G	6.1%	P416P (CCC→CCG)	PP_3750 →	GntR family transcriptional regulator
RA	4,284,643	C→T	8.9%	N16N (AAC→AAT)	hbd →	3‑hydroxybutyryl‑CoA dehydrogenase
RA	4,284,645	G→C	9.0%	G17A (GGC→GCC)	hbd →	3‑hydroxybutyryl‑CoA dehydrogenase
RA	4,284,647	A→G	8.8%	I18V (ATT→GTT)	hbd →	3‑hydroxybutyryl‑CoA dehydrogenase
RA	4,287,332	C→G	5.3%	G135A (GGC→GCC)	PP_3758 ←	two component system response regulator/sensor histidine kinase
RA	4,290,008	G→A	8.5%	A860V (GCG→GTG)	PP_3761 ←	two‑component system sensor histidine kinase/response regulator
RA	4,293,967	C→G	7.7%	D13H (GAC→CAC)	PP_3763 ←	precorrin‑6A synthase
RA	4,297,049	C→G	8.9%	T40S (ACC→AGC)	PP_3767 →	hypothetical protein
RA	4,305,604	G→A	10.7%	R151C (CGC→TGC)	PP_3777 ←	hypothetical protein
RA	4,311,314	T→A	8.0%	F12I (TTT→ATT)	PP_3784 →	hypothetical protein
RA	4,316,022	A→C	10.2%	A35A (GCA→GCC)	PP_3788 →	non‑ribosomal peptide synthetase
RA	4,316,025	G→T	10.6%	A36A (GCG→GCT)	PP_3788 →	non‑ribosomal peptide synthetase
RA	4,327,814	C→T	8.9%	A261V (GCG→GTG)	PP_3797 →	membrane protein
RA	4,332,994	T→A	7.8%	P266P (CCT→CCA)	PP_3804 →	hypothetical protein
RA	4,340,075	A→T	23.0%	intergenic (+60/‑271)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,340,076	G→C	23.4%	intergenic (+61/‑270)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,340,081	A→G	25.0%	intergenic (+66/‑265)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,340,082	C→T	28.6%	intergenic (+67/‑264)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,340,083	A→G	31.1%	intergenic (+68/‑263)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,340,084	C→T	30.3%	intergenic (+69/‑262)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,340,089	G→C	20.0%	intergenic (+74/‑257)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,340,090	A→T	19.9%	intergenic (+75/‑256)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,348,705	A→G	68.5%	intergenic (‑70/+404)	PP_3820 ← / ← galU	group II intron‑encoding maturase/UTP‑glucose‑1‑phosphate uridylyltransferase
RA	4,356,298	G→C	8.9%	A272A (GCG→GCC)	modC →	molybdate ABC transporter ATP‑binding protein ModC
RA	4,356,303	A→G	9.1%	Q274R (CAG→CGG)	modC →	molybdate ABC transporter ATP‑binding protein ModC
RA	4,356,311	G→C	10.0%	G277R (GGC→CGC)	modC →	molybdate ABC transporter ATP‑binding protein ModC
RA	4,356,602	G→A	10.8%	intergenic (+28/‑30)	modC → / → PP_3831	molybdate ABC transporter ATP‑binding protein ModC/hypothetical protein
RA	4,366,486	A→T	6.8%	R83R (CGT→CGA)	PP_3843 ←	hypothetical protein
RA	4,370,345	T→C	7.5%	A13A (GCT→GCC)	PP_3847 →	LuxR family transcriptional regulator
RA	4,370,349	C→T	7.5%	H15Y (CAC→TAC) ‡	PP_3847 →	LuxR family transcriptional regulator
RA	4,370,350	A→G	7.7%	H15R (CAC→CGC) ‡	PP_3847 →	LuxR family transcriptional regulator
RA	4,379,142	G→A	9.1%	A114A (GCG→GCA)  A66V (GCG→GTG) ‡	PP_5639 → PP_3855 ←	hypothetical protein hypothetical protein
RA	4,379,143	C→G	9.0%	Q115E (CAG→GAG)  A66P (GCG→CCG) ‡	PP_5639 → PP_3855 ←	hypothetical protein hypothetical protein
RA	4,379,146	G→C	9.2%	A116P (GCT→CCT)  P65A (CCT→GCT)	PP_5639 → PP_3855 ←	hypothetical protein hypothetical protein
RA	4,379,149	C→G	8.8%	L117V (CTG→GTG) ‡ E64Q (GAG→CAG)	PP_5639 → PP_3855 ←	hypothetical protein hypothetical protein
RA	4,379,150	T→C	8.8%	L117P (CTG→CCG) ‡ A63A (GCA→GCG)	PP_5639 → PP_3855 ←	hypothetical protein hypothetical protein
RA	4,382,821	G→A	11.7%	intergenic (‑32/+230)	PP_3857 ← / ← PP_3858	hypothetical protein/tail fiber protein
RA	4,382,822	T→C	11.8%	intergenic (‑33/+229)	PP_3857 ← / ← PP_3858	hypothetical protein/tail fiber protein
RA	4,388,994	G→C	8.0%	L583V (CTG→GTG)	PP_3865 ←	tail protein
RA	4,388,996	A→G	8.2%	L582P (CTG→CCG)	PP_3865 ←	tail protein
RA	4,389,000	C→G	8.2%	G581R (GGC→CGC)	PP_3865 ←	tail protein
RA	4,389,004	C→T	8.0%	P579P (CCG→CCA) ‡	PP_3865 ←	tail protein
RA	4,389,006	G→C	7.7%	P579A (CCG→GCG) ‡	PP_3865 ←	tail protein
RA	4,399,566	T→G	6.8%	R108R (CGA→CGC) ‡	PP_3878 ←	minor capsid protein C
RA	4,399,567	C→A	6.7%	R108L (CGA→CTA) ‡	PP_3878 ←	minor capsid protein C
RA	4,401,128	A→G	7.3%	N10N (AAT→AAC)	PP_3879 ←	HK97 family portal protein
RA	4,415,032	T→C	6.6%	intergenic (+141/+27)	PP_5644 → / ← PP_3899	membrane protein/hicB family protein
RA	4,415,037	G→A	6.7%	intergenic (+146/+22)	PP_5644 → / ← PP_3899	membrane protein/hicB family protein
RA	4,419,577	T→G	6.2%	I115S (ATC→AGC)	PP_3910 →	hypothetical protein
RA	4,430,084	T→G	8.6%	intergenic (+37/‑147)	PP_3924 → / → PP_3925	hypothetical protein/hypothetical protein
RA	4,430,085	G→T	8.3%	intergenic (+38/‑146)	PP_3924 → / → PP_3925	hypothetical protein/hypothetical protein
RA	4,430,086	A→C	8.3%	intergenic (+39/‑145)	PP_3924 → / → PP_3925	hypothetical protein/hypothetical protein
RA	4,430,087	C→A	8.2%	intergenic (+40/‑144)	PP_3924 → / → PP_3925	hypothetical protein/hypothetical protein
RA	4,430,496	G→A	6.1%	G89D (GGC→GAC)	PP_3925 →	hypothetical protein
RA	4,432,202	C→G	6.1%	L241L (CTG→CTC)	PP_3927 ←	type 12 methyltransferase
RA	4,432,205	C→G	7.0%	A240A (GCG→GCC) ‡	PP_3927 ←	type 12 methyltransferase
RA	4,432,206	G→C	6.1%	A240G (GCG→GGG) ‡	PP_3927 ←	type 12 methyltransferase
RA	4,432,207	C→G	6.2%	A240P (GCG→CCG) ‡	PP_3927 ←	type 12 methyltransferase
RA	4,432,210	C→G	6.0%	E239Q (GAG→CAG)	PP_3927 ←	type 12 methyltransferase
RA	4,442,628	C→G	9.8%	intergenic (‑98/+40)	nicP‑II ← / ← nicT	porin‑like protein/metabolite transport protein NicT
RA	4,442,629	C→G	11.5%	intergenic (‑99/+39)	nicP‑II ← / ← nicT	porin‑like protein/metabolite transport protein NicT
RA	4,445,250	C→G	8.8%	G117A (GGG→GCG) ‡	nicE ←	maleate isomerase
RA	4,445,251	C→G	9.9%	G117R (GGG→CGG) ‡	nicE ←	maleate isomerase
RA	4,459,754	T→A	9.8%	L260Q (CTG→CAG)	trkH‑I →	potassium transporter
RA	4,479,900	T→C	7.5%	V12A (GTA→GCA) ‡	PP_3971 →	hypothetical protein
RA	4,479,901	A→T	7.5%	V12V (GTA→GTT) ‡	PP_3971 →	hypothetical protein
RA	4,479,902	G→A	7.5%	A13T (GCG→ACG)	PP_3971 →	hypothetical protein
RA	4,505,657	T→C	9.1%	L144P (CTG→CCG)	PP_3997 →	glycosyl transferase
RA	4,506,757	C→G	8.6%	F151L (TTC→TTG)	gqr →	glutathionyl‑hydroquinone reductase
RA	4,507,298	T→A	8.8%	intergenic (+16/+91)	gqr → / ← cysG	glutathionyl‑hydroquinone reductase/multifunctional uroporphyrinogen‑III C‑methyltransferase/precorrin‑2 dehydrogenase/sirohydrochlorin ferrochelatase
RA	4,507,299	T→A	8.7%	intergenic (+17/+90)	gqr → / ← cysG	glutathionyl‑hydroquinone reductase/multifunctional uroporphyrinogen‑III C‑methyltransferase/precorrin‑2 dehydrogenase/sirohydrochlorin ferrochelatase
RA	4,507,300	T→A	8.4%	intergenic (+18/+89)	gqr → / ← cysG	glutathionyl‑hydroquinone reductase/multifunctional uroporphyrinogen‑III C‑methyltransferase/precorrin‑2 dehydrogenase/sirohydrochlorin ferrochelatase
RA	4,513,847	G→C	7.0%	S382W (TCG→TGG) ‡	ftsK ←	DNA translocase FtsK
RA	4,513,848	A→G	7.0%	S382P (TCG→CCG) ‡	ftsK ←	DNA translocase FtsK
RA	4,516,184	T→G	5.5%	C17G (TGC→GGC)	ate →	arginyl‑tRNA‑‑protein transferase
RA	4,516,189	C→G	5.5%	S18R (AGC→AGG)	ate →	arginyl‑tRNA‑‑protein transferase
RA	4,516,192	C→G	5.8%	Y19* (TAC→TAG)	ate →	arginyl‑tRNA‑‑protein transferase
RA	4,516,197	C→A	7.2%	P21Q (CCG→CAG)	ate →	arginyl‑tRNA‑‑protein transferase
RA	4,519,450	A→G	9.4%	F24L (TTC→CTC)	clpA ←	ATP‑dependent serine protease
RA	4,519,451	C→T	9.4%	E23E (GAG→GAA)	clpA ←	ATP‑dependent serine protease
RA	4,521,320	G→A	6.9%	P140S (CCA→TCA)	icd ←	NADP(+)‑specific isocitrate dehydrogenase
RA	4,521,977	G→T	7.4%	intergenic (‑240/‑175)	icd ← / → idh	NADP(+)‑specific isocitrate dehydrogenase/isocitrate dehydrogenase
RA	4,528,353	T→A	7.2%	intergenic (+28/‑48)	purB → / → PP_4017	adenylosuccinate lyase/hypothetical protein
RA	4,536,024	T→C	10.5%	intergenic (+551/‑264)	PP_4022 → / → PP_4024	hypothetical protein/transposase
RA	4,541,836	C→T	6.3%	Q185* (CAG→TAG) ‡	nhaB →	Na(+)/H(+) antiporter NhaB
RA	4,541,837	A→T	6.2%	Q185L (CAG→CTG) ‡	nhaB →	Na(+)/H(+) antiporter NhaB
RA	4,541,840	A→T	6.2%	Q186L (CAA→CTA) ‡	nhaB →	Na(+)/H(+) antiporter NhaB
RA	4,541,841	A→G	6.2%	Q186Q (CAA→CAG) ‡	nhaB →	Na(+)/H(+) antiporter NhaB
RA	4,547,594	T→C	8.5%	intergenic (‑249/‑95)	pydP ← / → pydB	NCS1 family transporter PydP/bifunctional D‑hydantoinase/dihydropyrimidinase
RA	4,547,601	G→T	7.1%	intergenic (‑256/‑88)	pydP ← / → pydB	NCS1 family transporter PydP/bifunctional D‑hydantoinase/dihydropyrimidinase
RA	4,547,602	A→C	7.3%	intergenic (‑257/‑87)	pydP ← / → pydB	NCS1 family transporter PydP/bifunctional D‑hydantoinase/dihydropyrimidinase
RA	4,547,609	G→A	7.3%	intergenic (‑264/‑80)	pydP ← / → pydB	NCS1 family transporter PydP/bifunctional D‑hydantoinase/dihydropyrimidinase
RA	4,557,176	C→G	9.1%	D101H (GAC→CAC)	gntZ ←	6‑phosphogluconate dehydrogenase
RA	4,558,076	C→T	8.1%	G27D (GGC→GAC)	PP_4045 ←	hypothetical protein
RA	4,571,605	A→G	6.8%	D490G (GAC→GGC)	treY →	maltooligosyl trehalose synthase
RA	4,573,450	C→T	7.3%	A41V (GCC→GTC)	glgX →	glycogen debranching enzyme
RA	4,578,141	C→G	10.8%	S657T (AGC→ACC)	glgB ←	1,4‑alpha‑glucan branching enzyme
RA	4,583,538	T→G	12.9%	intergenic (‑111/+60)	treSB ← / ← glgE	bifunctional trehalose synthase B/maltokinase/alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase
RA	4,586,030	2 bp→TC	100%	intergenic (+113/+101)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,586,033:1	+G	100%	intergenic (+116/+99)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,586,056:1	+C	47.8%	intergenic (+139/+76)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,586,057:1	+C	52.2%	intergenic (+140/+75)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,610,150	C→T	8.3%	L213L (CTG→TTG)	PP_4081 →	type IV/VI secretion system protein
RA	4,610,194	C→T	9.5%	P227P (CCC→CCT)	PP_4081 →	type IV/VI secretion system protein
RA	4,615,343	G→A	9.3%	V572M (GTG→ATG) ‡	PP_4085 →	rhs family protein
RA	4,615,345	G→C	9.4%	V572V (GTG→GTC) ‡	PP_4085 →	rhs family protein
RA	4,615,347	T→C	9.2%	I573T (ATT→ACT)	PP_4085 →	rhs family protein
RA	4,631,597	C→T	10.2%	intergenic (+1371/‑64)	PP_4094 → / → PP_4096	hypothetical protein/hypothetical protein
RA	4,632,498	G→T	7.5%	intergenic (+103/+56)	PP_4096 → / ← PP_t59	hypothetical protein/tRNA‑Gly
RA	4,632,499	A→C	5.7%	intergenic (+104/+55)	PP_4096 → / ← PP_t59	hypothetical protein/tRNA‑Gly
RA	4,635,568	A→C	100%	L63R (CTG→CGG)	uvrY ←	BarA/UvrY two‑componenent system response regulator
RA	4,647,850	T→G	7.4%	D430A (GAC→GCC)	PP_4112 ←	sulfate transporter
RA	4,664,994	C→G	5.4%	P43R (CCG→CGG)	nuoI →	NADH‑quinone oxidoreductase subunit I
RA	4,665,001	C→G	5.2%	R45R (CGC→CGG)	nuoI →	NADH‑quinone oxidoreductase subunit I
RA	4,666,304:1	+A	6.3%	coding (70/1854 nt)	nuoL →	NADH‑quinone oxidoreductase subunit L
RA	4,666,312	G→C	6.1%	S26S (TCG→TCC)	nuoL →	NADH‑quinone oxidoreductase subunit L
RA	4,670,998	C→G	7.5%	H444D (CAC→GAC)	nuoN →	NADH‑quinone oxidoreductase subunit N
RA	4,671,822	A→G	6.0%	I51V (ATA→GTA)	PP_4133 →	transcriptional regulator‑like protein
RA	4,677,892	C→G	6.3%	G228R (GGC→CGC)	ldcC ←	lysine decarboxylase
RA	4,677,893	G→C	6.1%	F227L (TTC→TTG)	ldcC ←	lysine decarboxylase
RA	4,677,896	G→C	5.8%	N226K (AAC→AAG)	ldcC ←	lysine decarboxylase
RA	4,677,899	G→C	6.1%	R225R (CGC→CGG) ‡	ldcC ←	lysine decarboxylase
RA	4,677,900	C→G	6.2%	R225P (CGC→CCC) ‡	ldcC ←	lysine decarboxylase
RA	4,694,425	C→G	8.3%	P767R (CCC→CGC)	PP_4154 →	class 3 aminotransferase
RA	4,705,413	T→A	16.0%	intergenic (‑151/+26)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,705,414	T→A	16.3%	intergenic (‑152/+25)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,705,424	A→G	9.1%	intergenic (‑162/+15)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,705,425	G→A	8.9%	intergenic (‑163/+14)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,718,688	C→A	8.6%	intergenic (+32/+99)	fabB → / ← PP_4176	3‑oxoacyl‑ACP synthase/5‑oxo‑L‑prolinase
RA	4,718,689	T→C	8.5%	intergenic (+33/+98)	fabB → / ← PP_4176	3‑oxoacyl‑ACP synthase/5‑oxo‑L‑prolinase
RA	4,718,690	G→C	9.1%	intergenic (+34/+97)	fabB → / ← PP_4176	3‑oxoacyl‑ACP synthase/5‑oxo‑L‑prolinase
RA	4,718,691	G→A	9.1%	intergenic (+35/+96)	fabB → / ← PP_4176	3‑oxoacyl‑ACP synthase/5‑oxo‑L‑prolinase
RA	4,718,692	T→G	8.7%	intergenic (+36/+95)	fabB → / ← PP_4176	3‑oxoacyl‑ACP synthase/5‑oxo‑L‑prolinase
RA	4,725,040	G→A	7.8%	intergenic (+25/+43)	PP_5661 → / ← PP_4183	putative lipoprotein/membrane protein
RA	4,725,041	A→T	7.7%	intergenic (+26/+42)	PP_5661 → / ← PP_4183	putative lipoprotein/membrane protein
RA	4,725,042	T→C	7.3%	intergenic (+27/+41)	PP_5661 → / ← PP_4183	putative lipoprotein/membrane protein
RA	4,730,126	T→C	10.0%	S440G (AGT→GGT)	lpdG ←	dihydrolipoyl dehydrogenase
RA	4,730,127	G→A	10.1%	T439T (ACC→ACT)	lpdG ←	dihydrolipoyl dehydrogenase
RA	4,740,805	Δ1 bp	100%	intergenic (+42/+711)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,816	T→G	100%	intergenic (+53/+700)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,819	2 bp→CT	100%	intergenic (+56/+696)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,839	C→G	17.1%	intergenic (+76/+677)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,841	T→A	16.8%	intergenic (+78/+675)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,842	T→A	17.5%	intergenic (+79/+674)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,844	C→G	23.1%	intergenic (+81/+672)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,229	A→C	100%	intergenic (+466/+287)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,231	C→G	100%	intergenic (+468/+285)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,234	C→T	100%	intergenic (+471/+282)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,236	2 bp→TG	100%	intergenic (+473/+279)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,239	A→G	100%	intergenic (+476/+277)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,243	3 bp→TGC	100%	intergenic (+480/+271)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,255	C→T	100%	intergenic (+492/+261)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,257	A→C	100%	intergenic (+494/+259)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,260	2 bp→GC	100%	intergenic (+497/+255)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,263	A→C	100%	intergenic (+500/+253)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,272	A→G	100%	intergenic (+509/+244)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,274	A→C	100%	intergenic (+511/+242)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,276	G→C	100%	intergenic (+513/+240)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,278	C→T	100%	intergenic (+515/+238)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,283:1	+T	100%	intergenic (+520/+233)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,289	C→G	100%	intergenic (+526/+227)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,292	C→T	100%	intergenic (+529/+224)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,294	C→G	100%	intergenic (+531/+222)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,296	A→C	100%	intergenic (+533/+220)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,298	C→T	100%	intergenic (+535/+218)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,743,805	G→A	7.5%	Q63* (CAA→TAA)	PP_4197 ←	GntR family transcriptional regulator
RA	4,758,424	C→G	8.1%	V454L (GTG→CTG)	pvdP ←	pyoverdine biosynthesis‑like protein
RA	4,758,425	G→T	8.1%	V453V (GTC→GTA) ‡	pvdP ←	pyoverdine biosynthesis‑like protein
RA	4,758,426	A→C	8.3%	V453G (GTC→GGC) ‡	pvdP ←	pyoverdine biosynthesis‑like protein
RA	4,758,427	C→G	8.2%	V453L (GTC→CTC) ‡	pvdP ←	pyoverdine biosynthesis‑like protein
RA	4,767,818	C→T	16.1%	intergenic (+32/+37)	fpvA → / ← PP_4218	TonB‑dependent outer membrane ferripyoverdine receptor FpvA/lipase/esterase family protein
RA	4,767,819	A→G	16.1%	intergenic (+33/+36)	fpvA → / ← PP_4218	TonB‑dependent outer membrane ferripyoverdine receptor FpvA/lipase/esterase family protein
RA	4,774,790	C→A	5.3%	A1493S (GCA→TCA)	pvdD ←	non‑ribosomal peptide synthetase
RA	4,774,801	T→G	5.3%	D1489A (GAC→GCC)	pvdD ←	non‑ribosomal peptide synthetase
RA	4,780,984	G→A	8.7%	C2110C (TGC→TGT)	pvdJ ←	non‑ribosomal peptide synthetase
RA	4,792,250	A→G	5.5%	S530S (AGT→AGC)	pvdI ←	non‑ribosomal peptide synthetase
RA	4,796,604	A→G	11.9%	intergenic (‑162/+56)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,612	C→T	17.8%	intergenic (‑170/+48)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,614	G→C	17.7%	intergenic (‑172/+46)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,617	G→C	15.1%	intergenic (‑175/+43)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,619	A→G	13.3%	intergenic (‑177/+41)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,627	C→T	14.2%	intergenic (‑185/+33)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,803,180	T→G	8.7%	N45T (AAC→ACC)	PP_4231 ←	xanthine dehydrogenase accessory factor
RA	4,803,182	C→G	8.7%	V44V (GTG→GTC) ‡	PP_4231 ←	xanthine dehydrogenase accessory factor
RA	4,803,184	C→A	8.7%	V44L (GTG→TTG) ‡	PP_4231 ←	xanthine dehydrogenase accessory factor
RA	4,803,206	Δ1 bp	9.1%	coding (108/972 nt)	PP_4231 ←	xanthine dehydrogenase accessory factor
RA	4,803,210:1	+T	9.1%	coding (104/972 nt)	PP_4231 ←	xanthine dehydrogenase accessory factor
RA	4,817,899	G→T	9.4%	G199C (GGT→TGT)	PP_4242 →	conserved protein of unknown function with Rhs repeat‑associated core domain
RA	4,822,351	T→C	5.6%	S2947G (AGC→GGC)	pvdL ←	non‑ribosomal peptide synthetase
RA	4,837,280	C→T	11.3%	A429A (GCC→GCT)	ccoN‑I →	cbb3‑type cytochrome c oxidase subunit 1
RA	4,837,281	A→G	11.3%	S430G (AGC→GGC)	ccoN‑I →	cbb3‑type cytochrome c oxidase subunit 1
RA	4,837,288	C→A	7.5%	P432Q (CCA→CAA)	ccoN‑I →	cbb3‑type cytochrome c oxidase subunit 1
RA	4,842,896	Δ1 bp	22.2%	intergenic (+40/‑257)	ccoP‑II → / → PP_4259	cbb3‑type cytochrome c oxidase subunit/iron‑sulfur cluster‑binding protein
RA	4,842,904:1	+G	25.6%	intergenic (+48/‑249)	ccoP‑II → / → PP_4259	cbb3‑type cytochrome c oxidase subunit/iron‑sulfur cluster‑binding protein
RA	4,850,158	C→T	10.6%	intergenic (+75/‑112)	hemN → / → fnrA	oxygen‑independent coproporphyrinogen III dehydrogenase/DNA‑binding transcriptional dual regulator
RA	4,850,159	C→G	10.6%	intergenic (+76/‑111)	hemN → / → fnrA	oxygen‑independent coproporphyrinogen III dehydrogenase/DNA‑binding transcriptional dual regulator
RA	4,850,160	A→G	10.9%	intergenic (+77/‑110)	hemN → / → fnrA	oxygen‑independent coproporphyrinogen III dehydrogenase/DNA‑binding transcriptional dual regulator
RA	4,860,817	A→C	5.5%	M78R (ATG→AGG)	ligA ←	DNA ligase
RA	4,873,746	C→A	7.4%	intergenic (‑127/+31)	aqpZ ← / ← PP_4283	aquaporin Z/GntR family transcriptional regulator
RA	4,873,747	T→A	7.9%	intergenic (‑128/+30)	aqpZ ← / ← PP_4283	aquaporin Z/GntR family transcriptional regulator
RA	4,873,748	T→G	7.9%	intergenic (‑129/+29)	aqpZ ← / ← PP_4283	aquaporin Z/GntR family transcriptional regulator
RA	4,880,092	C→G	5.3%	I234M (ATC→ATG)	PP_4289 →	membrane protein
RA	4,884,962	T→G	14.3%	E139A (GAA→GCA) ‡	yedI ←	inner membrane protein
RA	4,884,963	C→A	14.0%	E139* (GAA→TAA) ‡	yedI ←	inner membrane protein
RA	4,895,897	G→A	12.2%	V118I (GTC→ATC) ‡	PP_4304 →	VIC family cation transporter
RA	4,895,899	C→G	12.1%	V118V (GTC→GTG) ‡	PP_4304 →	VIC family cation transporter
RA	4,895,901	T→C	12.2%	I119T (ATC→ACC)	PP_4304 →	VIC family cation transporter
RA	4,896,626	A→G	9.6%	N18D (AAC→GAC) ‡	sbp‑I →	sulfate ABC transporter substrate‑binding protein
RA	4,896,628	C→G	9.6%	N18K (AAC→AAG) ‡	sbp‑I →	sulfate ABC transporter substrate‑binding protein
RA	4,896,629	C→G	9.4%	L19V (CTC→GTC) ‡	sbp‑I →	sulfate ABC transporter substrate‑binding protein
RA	4,896,631	C→T	9.9%	L19L (CTC→CTT) ‡	sbp‑I →	sulfate ABC transporter substrate‑binding protein
RA	4,900,065	A→G	11.0%	intergenic (+26/‑472)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,069	G→A	11.2%	intergenic (+30/‑468)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,070	T→C	11.4%	intergenic (+31/‑467)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,074	C→T	14.5%	intergenic (+35/‑463)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,901,881	G→A	8.0%	A449T (GCC→ACC)	PP_4309 →	NCS1 family transporter
RA	4,902,466	G→T	6.5%	L127L (CTG→CTT)	PP_4310 →	hydantoin racemase
RA	4,914,751	T→C	6.1%	T134A (ACC→GCC)	ccmE ←	cytochrome c‑type biogenesis protein CcmE
RA	4,921,585	G→T	7.1%	R665L (CGG→CTG)	PP_4330 →	toxin‑like protein
RA	4,921,588	C→G	7.2%	A666G (GCC→GGC) ‡	PP_4330 →	toxin‑like protein
RA	4,921,589	C→G	7.0%	A666A (GCC→GCG) ‡	PP_4330 →	toxin‑like protein
RA	4,921,592	A→C	6.8%	P667P (CCA→CCC)	PP_4330 →	toxin‑like protein
RA	4,921,695	A→G	5.9%	I702V (ATC→GTC) ‡	PP_4330 →	toxin‑like protein
RA	4,921,696	T→A	5.9%	I702N (ATC→AAC) ‡	PP_4330 →	toxin‑like protein
RA	4,922,701	T→C	5.6%	K26E (AAG→GAG)	PP_4331 ←	hypothetical protein
RA	4,930,408	G→C	7.0%	L189V (CTG→GTG)	cheZ ←	protein phosphatase CheZ
RA	4,930,410	G→C	7.9%	T188R (ACA→AGA)	cheZ ←	protein phosphatase CheZ
RA	4,932,635	C→T	8.9%	R138H (CGC→CAC)	PP_4342 ←	flagellar biosynthesis regulator
RA	4,944,741	A→G	5.4%	intergenic (+101/+697)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,944,743	A→G	5.5%	intergenic (+103/+695)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,953,574	C→T	6.5%	V286V (GTG→GTA)	PP_4363 ←	two‑component system sensor histidine kinase/response regulator
RA	4,959,920	T→C	7.8%	D184G (GAT→GGT)	fliF ←	flagellar M‑ring protein
RA	4,964,646	T→C	6.8%	N238D (AAC→GAC)	fleQ ←	transcriptional regulator FleQ
RA	4,970,868	G→T	6.6%	A233D (GCC→GAC)	PP_4379 ←	3‑oxoacyl‑ACP synthase
RA	4,970,872:1	+G	6.8%	coding (694/930 nt)	PP_4379 ←	3‑oxoacyl‑ACP synthase
RA	4,970,878	Δ1 bp	7.0%	coding (688/930 nt)	PP_4379 ←	3‑oxoacyl‑ACP synthase
RA	4,970,884	A→C	8.7%	S228A (TCG→GCG)	PP_4379 ←	3‑oxoacyl‑ACP synthase
RA	4,971,954	G→T	8.8%	intergenic (‑389/+28)	PP_4379 ← / ← flgL	3‑oxoacyl‑ACP synthase/flagellar hook‑associated protein FlgL
RA	4,971,955	C→G	8.8%	intergenic (‑390/+27)	PP_4379 ← / ← flgL	3‑oxoacyl‑ACP synthase/flagellar hook‑associated protein FlgL
RA	4,971,956	A→C	8.8%	intergenic (‑391/+26)	PP_4379 ← / ← flgL	3‑oxoacyl‑ACP synthase/flagellar hook‑associated protein FlgL
RA	4,980,353	C→A	6.5%	intergenic (‑144/+17)	flgF ← / ← PP_4387	flagellar basal‑body rod protein FlgF/hypothetical protein
RA	4,980,354	T→G	6.4%	intergenic (‑145/+16)	flgF ← / ← PP_4387	flagellar basal‑body rod protein FlgF/hypothetical protein
JC	4,980,585	+GGC	100%	intergenic (‑24/+44)	PP_4387 ← / ← flgE	hypothetical protein/flagellar hook protein FlgE
RA	4,995,522	C→G	9.1%	R396G (CGC→GGC) ‡	bkdB →	branched‑chain alpha‑keto acid dehydrogenase complex lipoamide acyltransferase
RA	4,995,523	G→C	9.1%	R396P (CGC→CCC) ‡	bkdB →	branched‑chain alpha‑keto acid dehydrogenase complex lipoamide acyltransferase
RA	4,995,524	C→G	9.1%	R396R (CGC→CGG) ‡	bkdB →	branched‑chain alpha‑keto acid dehydrogenase complex lipoamide acyltransferase
RA	4,996,521	T→G	6.4%	I304S (ATC→AGC)	lpdV →	branched‑chain alpha‑keto acid dehydrogenase complex dihydrolipoyl dehydrogenase
RA	4,996,527	A→T	6.7%	D306V (GAC→GTC)	lpdV →	branched‑chain alpha‑keto acid dehydrogenase complex dihydrolipoyl dehydrogenase
RA	5,016,328	G→A	9.7%	I345I (ATC→ATT) ‡	PP_4421 ←	aminotransferase
RA	5,016,329	A→T	9.7%	I345N (ATC→AAC) ‡	PP_4421 ←	aminotransferase
RA	5,043,935	C→T	100%	N335N (AAC→AAT)	PP_4448 →	hypothetical protein
RA	5,044,485	G→A	6.6%	D519N (GAC→AAC)	PP_4448 →	hypothetical protein
RA	5,044,488	A→G	6.6%	T520A (ACG→GCG) ‡	PP_4448 →	hypothetical protein
RA	5,044,489	C→T	6.6%	T520M (ACG→ATG) ‡	PP_4448 →	hypothetical protein
RA	5,044,492	T→C	6.7%	L521S (TTG→TCG)	PP_4448 →	hypothetical protein
RA	5,059,500	Δ1 bp	12.3%	coding (1334/1581 nt)	PP_4458 ←	opine ABC transporter substrate‑binding protein
RA	5,059,505	A→T	13.5%	N443K (AAT→AAA)	PP_4458 ←	opine ABC transporter substrate‑binding protein
RA	5,059,508:1	+G	11.9%	coding (1326/1581 nt)	PP_4458 ←	opine ABC transporter substrate‑binding protein
RA	5,069,243	T→C	8.0%	Q21R (CAA→CGA)	PP_4465 ←	porin
RA	5,078,877	G→C	7.9%	intergenic (‑122/+275)	mgtE ← / ← PP_t56	magnesium transporter/tRNA‑Arg
RA	5,079,126	T→A	11.8%	intergenic (‑371/+26)	mgtE ← / ← PP_t56	magnesium transporter/tRNA‑Arg
RA	5,079,129	T→A	11.9%	intergenic (‑374/+23)	mgtE ← / ← PP_t56	magnesium transporter/tRNA‑Arg
RA	5,082,029	T→A	6.6%	E746V (GAA→GTA) ‡	alaS ←	alanine‑‑tRNA ligase
RA	5,082,030	C→A	6.9%	E746* (GAA→TAA) ‡	alaS ←	alanine‑‑tRNA ligase
RA	5,085,017	A→T	7.3%	L214Q (CTG→CAG)	astE ←	succinylglutamate desuccinylase
RA	5,096,978	G→T	6.0%	noncoding (55/86 nt)	PP_mr66 →	P6
RA	5,097,240	A→C	13.7%	intergenic (+231/+61)	PP_mr66 → / ← acsA‑I	P6/acetyl‑CoA synthetase
RA	5,097,489	A→T	9.0%	S635T (TCG→ACG)	acsA‑I ←	acetyl‑CoA synthetase
RA	5,098,621	C→T	7.4%	V257V (GTG→GTA)	acsA‑I ←	acetyl‑CoA synthetase
RA	5,103,088	A→T	9.3%	intergenic (+20/‑170)	phhB → / → PP_5694	pterin‑4‑alpha‑carbinolamine dehydratase/hypothetical protein
RA	5,103,089	G→C	9.3%	intergenic (+21/‑169)	phhB → / → PP_5694	pterin‑4‑alpha‑carbinolamine dehydratase/hypothetical protein
RA	5,103,090	A→T	9.3%	intergenic (+22/‑168)	phhB → / → PP_5694	pterin‑4‑alpha‑carbinolamine dehydratase/hypothetical protein
RA	5,112,952	T→C	7.1%	S165G (AGC→GGC)	PP_4497 ←	hypothetical protein
RA	5,125,401	A→C	9.1%	D65A (GAT→GCT)	PP_4512 →	DMT superfamily permease
RA	5,132,360	G→A	8.5%	R40H (CGC→CAC)	PP_4518 →	hypothetical protein
RA	5,134,906	G→A	10.6%	P12S (CCG→TCG)	PP_4520 ←	hypothetical protein
RA	5,134,913	G→C	12.8%	C9W (TGC→TGG)	PP_4520 ←	hypothetical protein
RA	5,134,920	T→C	9.6%	E7G (GAG→GGG)	PP_4520 ←	hypothetical protein
RA	5,137,665	A→G	7.8%	intergenic (‑64/‑149)	PP_4522 ← / → PP_4523	LysR family transcriptional regulator/agmatinase
RA	5,137,670	C→T	7.9%	intergenic (‑69/‑144)	PP_4522 ← / → PP_4523	LysR family transcriptional regulator/agmatinase
RA	5,148,214	T→A	5.3%	intergenic (+17/+56)	mscMB → / ← PP_5695	miniconductance mechanosensitive channel protein/hypothetical protein
RA	5,149,436	C→G	8.4%	intergenic (‑422/+26)	PP_mr51 ← / ← PP_4535	C4 ncRNA/hypothetical protein
RA	5,149,437	T→G	8.5%	intergenic (‑423/+25)	PP_mr51 ← / ← PP_4535	C4 ncRNA/hypothetical protein
RA	5,149,440	C→A	8.6%	intergenic (‑426/+22)	PP_mr51 ← / ← PP_4535	C4 ncRNA/hypothetical protein
RA	5,149,441	C→G	8.6%	intergenic (‑427/+21)	PP_mr51 ← / ← PP_4535	C4 ncRNA/hypothetical protein
RA	5,149,444	C→T	8.5%	intergenic (‑430/+18)	PP_mr51 ← / ← PP_4535	C4 ncRNA/hypothetical protein
RA	5,162,202	T→A	8.3%	W324R (TGG→AGG) ‡	PP_4544 →	hypothetical protein
RA	5,162,204	G→C	7.0%	W324C (TGG→TGC) ‡	PP_4544 →	hypothetical protein
RA	5,162,206	T→A	7.0%	L325Q (CTG→CAG)	PP_4544 →	hypothetical protein
RA	5,162,208	G→C	7.0%	A326P (GCT→CCT) ‡	PP_4544 →	hypothetical protein
RA	5,162,210	T→A	7.0%	A326A (GCT→GCA) ‡	PP_4544 →	hypothetical protein
RA	5,163,869	T→A	7.4%	intergenic (‑19/+105)	PP_4545 ← / ← hrpA	beta‑ketodecanoyl‑ACP synthase/ATP‑dependent helicase HrpA
RA	5,168,314	T→G	5.8%	intergenic (‑435/‑69)	hrpA ← / → PP_4547	ATP‑dependent helicase HrpA/glutamine synthetase
RA	5,173,244	T→C	22.8%	intergenic (‑285/+47)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,247	G→C	18.5%	intergenic (‑288/+44)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,248	G→C	18.4%	intergenic (‑289/+43)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,251	G→A	19.1%	intergenic (‑292/+40)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,182,059	G→T	11.7%	intergenic (‑117/+37)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,182,065	T→G	11.7%	intergenic (‑123/+31)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,182,066	C→A	10.8%	intergenic (‑124/+30)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,182,072	A→C	7.0%	intergenic (‑130/+24)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,194,887	T→G	9.7%	intergenic (+29/+24)	PP_4574 → / ← PP_4575	hypothetical protein/urea amidolyase‑like protein
RA	5,197,774	T→A	7.5%	E270D (GAA→GAT)	PP_4578 ←	MFS transporter
RA	5,211,028	T→C	11.6%	I308V (ATC→GTC)	PP_4592 ←	metal dependent hydrolase
RA	5,211,029	G→A	11.5%	D307D (GAC→GAT)	PP_4592 ←	metal dependent hydrolase
RA	5,212,504	T→C	7.7%	intergenic (+68/+26)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,212,507	A→G	7.3%	intergenic (+71/+23)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,218,238	T→A	5.3%	F96I (TTC→ATC) ‡	PP_4598 →	membrane protein
RA	5,218,239	T→A	5.3%	F96Y (TTC→TAC) ‡	PP_4598 →	membrane protein
RA	5,218,242	T→A	5.3%	V97E (GTG→GAG)	PP_4598 →	membrane protein
RA	5,235,123	A→G	6.8%	T153A (ACC→GCC)	fecA →	outer membrane ferric citrate porin
RA	5,235,585	T→C	8.7%	W307R (TGG→CGG)	fecA →	outer membrane ferric citrate porin
RA	5,238,644	G→T	8.0%	G52G (GGG→GGT)	PP_5701 →	hypothetical protein
RA	5,239,884	G→A	13.7%	A144V (GCG→GTG)	ldh ←	leucine dehydrogenase
RA	5,239,889	T→C	13.0%	P142P (CCA→CCG)	ldh ←	leucine dehydrogenase
RA	5,240,567	C→G	8.1%	H43Q (CAC→CAG)	PP_4618 →	hypothetical protein
RA	5,240,569	A→T	7.9%	D44V (GAC→GTC)	PP_4618 →	hypothetical protein
RA	5,240,571	C→G	8.1%	L45V (CTG→GTG)	PP_4618 →	hypothetical protein
RA	5,253,883	G→A	11.5%	R251C (CGC→TGC)	PP_4630 ←	MerR family transcriptional regulator
RA	5,253,887	G→C	11.6%	F249L (TTC→TTG)	PP_4630 ←	MerR family transcriptional regulator
RA	5,253,891	T→C	10.5%	H248R (CAC→CGC)	PP_4630 ←	MerR family transcriptional regulator
RA	5,254,083	G→A	10.2%	A184V (GCG→GTG)	PP_4630 ←	MerR family transcriptional regulator
RA	5,264,290:1	+T	7.9%	intergenic (‑44/+40)	zinU ← / ← PP_4640	P‑loop guanosine triphosphatase‑dependent zinc chaperone/hypothetical protein
RA	5,264,293	T→G	7.2%	intergenic (‑47/+37)	zinU ← / ← PP_4640	P‑loop guanosine triphosphatase‑dependent zinc chaperone/hypothetical protein
RA	5,264,296	C→A	7.3%	intergenic (‑50/+34)	zinU ← / ← PP_4640	P‑loop guanosine triphosphatase‑dependent zinc chaperone/hypothetical protein
RA	5,264,299	Δ1 bp	6.8%	intergenic (‑53/+31)	zinU ← / ← PP_4640	P‑loop guanosine triphosphatase‑dependent zinc chaperone/hypothetical protein
RA	5,267,497	T→A	9.8%	L28Q (CTG→CAG)	PP_4643 →	xanthine/uracil permease family protein
RA	5,267,501	Δ1 bp	7.5%	coding (87/1518 nt)	PP_4643 →	xanthine/uracil permease family protein
RA	5,267,505:1	+C	6.8%	coding (91/1518 nt)	PP_4643 →	xanthine/uracil permease family protein
RA	5,267,509	T→A	6.9%	L32Q (CTG→CAG)	PP_4643 →	xanthine/uracil permease family protein
RA	5,268,951	T→A	7.8%	intergenic (+19/+17)	PP_4643 → / ← radA	xanthine/uracil permease family protein/DNA repair enzyme
RA	5,268,952	T→A	7.8%	intergenic (+20/+16)	PP_4643 → / ← radA	xanthine/uracil permease family protein/DNA repair enzyme
RA	5,287,236	C→T	6.4%	A24T (GCC→ACC)	ggt ←	gamma‑glutamyltranspeptidase
RA	5,297,132	T→A	5.9%	E77D (GAA→GAT)	TpbB ←	diguanylate cyclase
RA	5,307,019	A→G	7.5%	V78A (GTG→GCG)	recC ←	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit
RA	5,314,235	G→C	7.4%	S260W (TCG→TGG)	msrP ←	methionine sulfoxide reductase catalytic subunit
RA	5,319,173	C→A	7.9%	K67N (AAG→AAT) ‡	ilvI ←	acetohydroxybutanoate synthase/acetolactate synthase
RA	5,319,174	T→A	7.9%	K67M (AAG→ATG) ‡	ilvI ←	acetohydroxybutanoate synthase/acetolactate synthase
RA	5,319,175	T→G	7.6%	K67Q (AAG→CAG) ‡	ilvI ←	acetohydroxybutanoate synthase/acetolactate synthase
RA	5,323,128	A→T	7.3%	Y42N (TAC→AAC)	mrcB ←	transglycosylase/transpeptidase
RA	5,323,129	A→T	7.3%	V41V (GTT→GTA)	mrcB ←	transglycosylase/transpeptidase
RA	5,324,153	T→C	6.4%	C263R (TGC→CGC)	PP_4684 →	kinase‑like domain‑containing protein
RA	5,324,157	T→G	6.3%	L264R (CTG→CGG)	PP_4684 →	kinase‑like domain‑containing protein
RA	5,324,162	C→A	6.0%	R266R (CGG→AGG)	PP_4684 →	kinase‑like domain‑containing protein
RA	5,333,666	G→C	6.9%	L32L (CTG→CTC)	PP_4695 →	two‑component system sensor histidine kinase
RA	5,333,668	T→G	7.3%	I33S (ATC→AGC)	PP_4695 →	two‑component system sensor histidine kinase
RA	5,336,737:1	+T	7.7%	coding (187/1443 nt)	PP_4696 →	nitrogen regulation protein NR(I)
RA	5,336,743	Δ1 bp	7.5%	coding (193/1443 nt)	PP_4696 →	nitrogen regulation protein NR(I)
RA	5,341,584	G→T	7.7%	V231L (GTG→TTG) ‡	panB →	3‑methyl‑2‑oxobutanoate hydroxymethyltransferase
RA	5,341,586	G→C	9.1%	V231V (GTG→GTC) ‡	panB →	3‑methyl‑2‑oxobutanoate hydroxymethyltransferase
RA	5,341,588	A→C	9.1%	K232T (AAG→ACG)	panB →	3‑methyl‑2‑oxobutanoate hydroxymethyltransferase
RA	5,351,358	A→G	6.2%	intergenic (+37/+39)	PP_4706 → / ← PP_4707	hypothetical protein/OsmY‑like protein
RA	5,359,060	T→A	5.5%	I404F (ATC→TTC)	nusA ←	transcription termination/antitermination factor L
RA	5,362,215	C→G	11.6%	V49L (GTG→CTG)	tpiA ←	triose phosphate isomerase
RA	5,362,216	C→G	11.3%	Q48H (CAG→CAC)	tpiA ←	triose phosphate isomerase
RA	5,364,420	C→G	6.5%	G72R (GGT→CGT)	folP ←	dihydropteroate synthase
RA	5,364,421	C→G	6.5%	P71P (CCG→CCC) ‡	folP ←	dihydropteroate synthase
RA	5,364,423	G→T	6.6%	P71T (CCG→ACG) ‡	folP ←	dihydropteroate synthase
RA	5,367,613	G→T	7.8%	E45D (GAG→GAT)	PP_4720 →	RNA‑binding protein
RA	5,371,996	Δ1 bp	7.8%	intergenic (‑60/+37)	carB ← / ← carA	carbamoyl‑phosphate synthase large subunit/carbamoyl‑phosphate synthase small subunit
RA	5,372,002	G→C	7.4%	intergenic (‑66/+31)	carB ← / ← carA	carbamoyl‑phosphate synthase large subunit/carbamoyl‑phosphate synthase small subunit
RA	5,372,008:1	+C	7.4%	intergenic (‑72/+25)	carB ← / ← carA	carbamoyl‑phosphate synthase large subunit/carbamoyl‑phosphate synthase small subunit
RA	5,385,226:1	+G	7.1%	intergenic (+19/‑44)	lldP → / → lldD	L‑lactate permease/L‑lactate dehydrogenase
RA	5,385,229	T→A	6.6%	intergenic (+22/‑41)	lldP → / → lldD	L‑lactate permease/L‑lactate dehydrogenase
RA	5,385,232	Δ1 bp	7.0%	intergenic (+25/‑38)	lldP → / → lldD	L‑lactate permease/L‑lactate dehydrogenase
RA	5,388,876	C→A	5.3%	L796M (CTG→ATG) ‡	dld2 →	D‑lactate dehydrogenase
RA	5,388,877	T→G	7.8%	L796R (CTG→CGG) ‡	dld2 →	D‑lactate dehydrogenase
RA	5,388,883	T→G	5.6%	L798R (CTG→CGG)	dld2 →	D‑lactate dehydrogenase
RA	5,399,802	A→G	7.3%	L205L (CTA→CTG)	PP_4743 →	hypothetical protein
RA	5,413,267	T→C	8.1%	V301V (GTA→GTG)	PP_4755 ←	ferrichrome‑iron receptor
RA	5,418,015	G→A	9.7%	A352A (GCC→GCT)	PP_4758 ←	MFS transporter
RA	5,426,955	A→G	8.1%	M383T (ATG→ACG)	rhlE‑I ←	ATP‑dependent RNA helicase
RA	5,428,205	T→C	7.4%	K292E (AAG→GAG)	yedA ←	phenylalanine/threonine exporter
RA	5,430,030	C→G	7.8%	A97P (GCG→CCG)	PP_4769 ←	hypothetical protein
RA	5,430,036	T→C	7.8%	I95V (ATC→GTC)	PP_4769 ←	hypothetical protein
RA	5,430,392	A→G	7.8%	intergenic (‑74/+87)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,430,396	A→G	8.0%	intergenic (‑78/+83)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,430,397:1	+A	8.5%	intergenic (‑79/+82)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,430,404	Δ1 bp	8.2%	intergenic (‑86/+75)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,430,406	C→T	8.3%	intergenic (‑88/+73)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,430,410	C→T	9.4%	intergenic (‑92/+69)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,449,171	C→G	10.2%	P14A (CCC→GCC) ‡	ybeZ →	nucleoside triphosphate hydrolase domain‑containing protein
RA	5,449,172	C→G	10.2%	P14R (CCC→CGC) ‡	ybeZ →	nucleoside triphosphate hydrolase domain‑containing protein
RA	5,449,173	C→G	10.2%	P14P (CCC→CCG) ‡	ybeZ →	nucleoside triphosphate hydrolase domain‑containing protein
RA	5,451,174	G→T	10.7%	G185C (GGC→TGC)	corC →	Co(2+)/Mg(2+)efflux heat shock protein
RA	5,455,129	A→G	6.9%	V155A (GTG→GCG)	PP_4792 ←	hypothetical protein
RA	5,462,393	T→G	6.9%	intergenic (+16/+18)	PP_4798 → / ← PP_4799	membrane‑bound lytic murein transglycosylase/muramoyltetrapeptide carboxypeptidase
RA	5,462,394	G→C	6.9%	intergenic (+17/+17)	PP_4798 → / ← PP_4799	membrane‑bound lytic murein transglycosylase/muramoyltetrapeptide carboxypeptidase
RA	5,462,395	C→A	6.7%	intergenic (+18/+16)	PP_4798 → / ← PP_4799	membrane‑bound lytic murein transglycosylase/muramoyltetrapeptide carboxypeptidase
RA	5,473,801	T→C	10.1%	I332V (ATC→GTC)	proA ←	gamma‑glutamyl phosphate reductase
RA	5,473,808	G→A	10.1%	N329N (AAC→AAT) ‡	proA ←	gamma‑glutamyl phosphate reductase
RA	5,473,809	T→A	9.4%	N329I (AAC→ATC) ‡	proA ←	gamma‑glutamyl phosphate reductase
RA	5,473,810	T→C	10.1%	N329D (AAC→GAC) ‡	proA ←	gamma‑glutamyl phosphate reductase
RA	5,473,817	G→A	9.8%	D326D (GAC→GAT)	proA ←	gamma‑glutamyl phosphate reductase
RA	5,483,191	G→T	7.7%	R36L (CGC→CTC)	PP_4821 →	Fis‑like DNA‑binding protein
RA	5,483,196	A→G	7.8%	S38G (AGC→GGC) ‡	PP_4821 →	Fis‑like DNA‑binding protein
RA	5,483,197	G→C	7.6%	S38T (AGC→ACC) ‡	PP_4821 →	Fis‑like DNA‑binding protein
RA	5,483,198	C→T	7.7%	S38S (AGC→AGT) ‡	PP_4821 →	Fis‑like DNA‑binding protein
RA	5,483,203	A→C	7.5%	E40A (GAG→GCG)	PP_4821 →	Fis‑like DNA‑binding protein
RA	5,485,150	A→G	22.8%	intergenic (+56/‑91)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,153	A→G	23.3%	intergenic (+59/‑88)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,154	T→C	23.5%	intergenic (+60/‑87)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,159	G→A	24.1%	intergenic (+65/‑82)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,162	T→C	25.7%	intergenic (+68/‑79)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,167	G→A	19.1%	intergenic (+73/‑74)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,168	C→T	17.6%	intergenic (+74/‑73)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,171	C→T	17.6%	intergenic (+77/‑70)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,491,492	C→G	5.1%	intergenic (‑28/+24)	PP_5715 ← / ← PP_5716	hypothetical protein/hypothetical protein
RA	5,491,494	T→C	5.1%	intergenic (‑30/+22)	PP_5715 ← / ← PP_5716	hypothetical protein/hypothetical protein
RA	5,491,501	A→G	5.6%	intergenic (‑37/+15)	PP_5715 ← / ← PP_5716	hypothetical protein/hypothetical protein
RA	5,503,135	C→A	6.4%	L29M (CTG→ATG)	oprC →	copper receptor OprC
RA	5,503,148	C→A	6.6%	P33H (CCT→CAT) ‡	oprC →	copper receptor OprC
RA	5,503,149	T→G	7.0%	P33P (CCT→CCG) ‡	oprC →	copper receptor OprC
RA	5,503,607	A→G	5.4%	N186S (AAC→AGC)	oprC →	copper receptor OprC
RA	5,518,539	A→T	8.2%	A14A (GCT→GCA)	PP_4850 ←	membrane protein
RA	5,518,544	G→C	8.9%	P13A (CCC→GCC)	PP_4850 ←	membrane protein
RA	5,518,546	A→T	8.3%	I12N (ATT→AAT)	PP_4850 ←	membrane protein
RA	5,518,548	G→C	8.5%	G11G (GGC→GGG)	PP_4850 ←	membrane protein
RA	5,518,553	A→T	8.7%	C10S (TGC→AGC)	PP_4850 ←	membrane protein
RA	5,525,770	C→A	9.4%	intergenic (+60/‑63)	PP_4858 → / → PP_4859	hypothetical protein/TetR family transcriptional regulator
RA	5,525,773	T→G	9.2%	intergenic (+63/‑60)	PP_4858 → / → PP_4859	hypothetical protein/TetR family transcriptional regulator
RA	5,532,750	C→T	9.2%	G145D (GGC→GAC)	braD ←	high‑affinity branched‑chain amino acid ABC transporter permease BraD
RA	5,532,754	A→G	9.9%	S144P (TCC→CCC)	braD ←	high‑affinity branched‑chain amino acid ABC transporter permease BraD
RA	5,532,755	C→T	10.1%	G143G (GGG→GGA)	braD ←	high‑affinity branched‑chain amino acid ABC transporter permease BraD
RA	5,532,759	A→G	10.2%	V142A (GTC→GCC)	braD ←	high‑affinity branched‑chain amino acid ABC transporter permease BraD
RA	5,541,263	A→T	7.5%	intergenic (‑278/+38)	PP_4872 ← / ← dnaB	hypothetical protein/replicative DNA helicase
RA	5,541,264	A→T	7.5%	intergenic (‑279/+37)	PP_4872 ← / ← dnaB	hypothetical protein/replicative DNA helicase
RA	5,541,265	A→T	8.0%	intergenic (‑280/+36)	PP_4872 ← / ← dnaB	hypothetical protein/replicative DNA helicase
RA	5,543,124	A→C	6.8%	A45A (GCT→GCG)	rplI ←	50S ribosomal protein L9
RA	5,549,605	T→A	13.4%	intergenic (+18/‑154)	PP_t47 → / → PP_4881	tRNA‑Leu/iron ABC transporter substrate‑binding protein
RA	5,549,606	T→A	13.4%	intergenic (+19/‑153)	PP_t47 → / → PP_4881	tRNA‑Leu/iron ABC transporter substrate‑binding protein
RA	5,550,546	C→T	7.5%	A263V (GCC→GTC)	PP_4881 →	iron ABC transporter substrate‑binding protein
RA	5,554,354	G→A	8.7%	A181V (GCG→GTG)	PP_4886 ←	hypothetical protein
RA	5,554,375	C→T	8.1%	R174H (CGC→CAC)	PP_4886 ←	hypothetical protein
JC	5,555,608	+GCC	94.7%	intergenic (‑84/+87)	PP_4887 ← / ← PP_4888	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	5,566,404	T→C	10.8%	E361G (GAG→GGG)	mutL ←	DNA mismatch repair protein MutL
RA	5,566,413	T→A	13.9%	Q358L (CAG→CTG)	mutL ←	DNA mismatch repair protein MutL
RA	5,574,789	C→T	8.1%	D169N (GAC→AAC)	motB ←	flagellar motor rotation protein
RA	5,574,790	G→C	8.1%	F168L (TTC→TTG) ‡	motB ←	flagellar motor rotation protein
RA	5,574,791	A→G	8.0%	F168S (TTC→TCC) ‡	motB ←	flagellar motor rotation protein
RA	5,574,832	G→T	5.4%	G154G (GGC→GGA)	motB ←	flagellar motor rotation protein
RA	5,584,672	A→T	9.3%	L354M (TTG→ATG)	parC ←	DNA topoisomerase IV subunit A
RA	5,595,751	C→A	6.0%	G110C (GGT→TGT)	thiC ←	phosphomethylpyrimidine synthase
RA	5,600,141	G→A	6.0%	A1114V (GCC→GTC)	PP_4924 ←	subtilase family serine protease
RA	5,614,055	A→T	7.2%	intergenic (+37/+45)	PP_4933 → / ← hldE	hypothetical protein/bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase
RA	5,614,056	A→T	8.7%	intergenic (+38/+44)	PP_4933 → / ← hldE	hypothetical protein/bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase
RA	5,614,063	C→T	8.1%	intergenic (+45/+37)	PP_4933 → / ← hldE	hypothetical protein/bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase
RA	5,614,703	A→C	6.4%	I273M (ATT→ATG)	hldE ←	bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase
RA	5,614,706	G→T	8.0%	A272A (GCC→GCA)	hldE ←	bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase
RA	5,629,625	G→T	15.3%	A214D (GCT→GAT)	putP ←	sodium/L‑proline transporter
RA	5,631,116	A→T	7.5%	K216* (AAG→TAG) ‡	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,631,117	A→T	7.5%	K216M (AAG→ATG) ‡	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,641,455	C→G	12.2%	S373C (TCC→TGC)	PP_4951 →	EmrB/QacA family drug resistance transporter
RA	5,641,460	C→G	12.8%	Q375E (CAG→GAG)	PP_4951 →	EmrB/QacA family drug resistance transporter
RA	5,643,236	A→G	7.0%	intergenic (+21/‑102)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,643,247	T→C	8.7%	intergenic (+32/‑91)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,643,261	G→A	8.0%	intergenic (+46/‑77)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,643,262	C→T	8.0%	intergenic (+47/‑76)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,643,263	A→G	7.9%	intergenic (+48/‑75)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,643,267	A→C	7.7%	intergenic (+52/‑71)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,643,270	G→T	10.6%	intergenic (+55/‑68)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,643,274	C→T	8.3%	intergenic (+59/‑64)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,643,275	A→G	7.9%	intergenic (+60/‑63)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,643,276	T→C	7.9%	intergenic (+61/‑62)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,643,290	G→A	7.8%	intergenic (+75/‑48)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,643,301	C→T	7.9%	intergenic (+86/‑37)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,652,959	G→A	9.7%	intergenic (‑60/+101)	PP_4961 ← / ← PP_4962	lipoprotein/hypothetical protein
RA	5,652,960	T→G	9.7%	intergenic (‑61/+100)	PP_4961 ← / ← PP_4962	lipoprotein/hypothetical protein
RA	5,652,963	A→T	15.7%	intergenic (‑64/+97)	PP_4961 ← / ← PP_4962	lipoprotein/hypothetical protein
RA	5,652,965	T→C	10.4%	intergenic (‑66/+95)	PP_4961 ← / ← PP_4962	lipoprotein/hypothetical protein
RA	5,652,966	G→A	10.6%	intergenic (‑67/+94)	PP_4961 ← / ← PP_4962	lipoprotein/hypothetical protein
RA	5,652,968	A→T	10.6%	intergenic (‑69/+92)	PP_4961 ← / ← PP_4962	lipoprotein/hypothetical protein
RA	5,652,971	C→A	10.7%	intergenic (‑72/+89)	PP_4961 ← / ← PP_4962	lipoprotein/hypothetical protein
RA	5,652,972	T→C	10.8%	intergenic (‑73/+88)	PP_4961 ← / ← PP_4962	lipoprotein/hypothetical protein
RA	5,660,182	G→T	7.9%	intergenic (+35/‑194)	metK → / → ligB	methionine adenosyltransferase/DNA ligase B
RA	5,660,185	A→C	8.3%	intergenic (+38/‑191)	metK → / → ligB	methionine adenosyltransferase/DNA ligase B
RA	5,665,587	C→T	7.7%	A40T (GCC→ACC)	PP_4973 ←	membrane protein
RA	5,674,750:1	+G	100%	intergenic (+112/+28)	rhlE‑II → / ← yceI	ATP‑dependent RNA helicase/polyisoprene‑binding acidic stress response factor
RA	5,674,753	G→C	100%	intergenic (+115/+25)	rhlE‑II → / ← yceI	ATP‑dependent RNA helicase/polyisoprene‑binding acidic stress response factor
RA	5,679,062	A→G	8.0%	M230V (ATG→GTG)	bioA →	adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA
JC	5,681,415	+CGGG	94.8%	intergenic (‑133/+71)	PP_4986 ← / ← PP_4987	hemolysin III family channel protein/putative Chemotaxis protein
RA	5,683,855	T→A	5.8%	D1013V (GAC→GTC)	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,683,857	T→A	6.0%	T1012T (ACA→ACT) ‡	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,683,859	T→A	5.8%	T1012S (ACA→TCA) ‡	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,684,804	G→C	7.4%	R697G (CGC→GGC)	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,684,806	C→T	7.5%	R696H (CGC→CAC)	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,684,809	T→A	6.8%	D695V (GAC→GTC)	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,684,812	A→G	6.0%	V694A (GTG→GCG)	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,692,563	C→T	9.2%	intergenic (+32/‑138)	PP_4994 → / → PP_4995	hypothetical protein/exopolysaccharide biosynthesis protein
RA	5,694,013	T→A	16.3%	L90Q (CTG→CAG)	pyrR →	pyrimidine operon regulatory protein/uracil phosphoribosyltransferase
RA	5,698,154	A→C	8.0%	K263T (AAG→ACG)	hslU →	protease HslVU ATPase subunit
RA	5,698,157	G→T	7.9%	R264L (CGT→CTT)	hslU →	protease HslVU ATPase subunit
RA	5,698,165	G→C	5.5%	V267L (GTT→CTT)	hslU →	protease HslVU ATPase subunit
RA	5,705,736	C→G	7.0%	A23P (GCG→CCG)	PP_5008 ←	poly granule‑associated protein
RA	5,705,737	A→C	6.4%	Y22* (TAT→TAG)	PP_5008 ←	poly granule‑associated protein
RA	5,705,740	G→T	6.2%	G21G (GGC→GGA) ‡	PP_5008 ←	poly granule‑associated protein
RA	5,705,741	C→G	7.1%	G21A (GGC→GCC) ‡	PP_5008 ←	poly granule‑associated protein
RA	5,712,952	C→G	9.8%	S134W (TCG→TGG)	ubiB →	2‑octaprenylphenol hydroxylase
RA	5,712,957	T→A	9.7%	S136T (TCG→ACG)	ubiB →	2‑octaprenylphenol hydroxylase
RA	5,717,405	C→T	7.4%	T35I (ACC→ATC)	PP_5020 →	methyl‑accepting chemotaxis protein
RA	5,732,472	G→C	5.7%	T28T (ACC→ACG)	hutI ←	imidazolonepropionase
RA	5,740,467	T→G	16.4%	intergenic (+32/+39)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,741,508	A→T	8.2%	intergenic (‑179/+49)	PP_5038 ← / ← PP_5039	lipoprotein/hypothetical protein
RA	5,741,890	C→T	7.7%	E88E (GAG→GAA)	PP_5039 ←	hypothetical protein
RA	5,741,895	A→G	6.8%	F87L (TTC→CTC)	PP_5039 ←	hypothetical protein
RA	5,763,853	A→C	6.9%	D410A (GAC→GCC)	PP_5057 →	M23/M37 family peptidase
RA	5,767,350	C→A	9.6%	M1174I (ATG→ATT) ‡	PP_5060 ←	hypothetical protein
RA	5,767,351	A→T	9.4%	M1174K (ATG→AAG) ‡	PP_5060 ←	hypothetical protein
RA	5,767,352	T→G	9.8%	M1174L (ATG→CTG) ‡	PP_5060 ←	hypothetical protein
RA	5,777,217	C→G	8.9%	L512V (CTG→GTG)	betA‑II →	choline dehydrogenase
RA	5,777,227	C→G	7.7%	T515S (ACC→AGC)	betA‑II →	choline dehydrogenase
RA	5,777,401	G→T	10.7%	intergenic (+20/+23)	betA‑II → / ← PP_5065	choline dehydrogenase/hypothetical protein
RA	5,777,402	C→G	10.7%	intergenic (+21/+22)	betA‑II → / ← PP_5065	choline dehydrogenase/hypothetical protein
RA	5,777,403	A→C	10.3%	intergenic (+22/+21)	betA‑II → / ← PP_5065	choline dehydrogenase/hypothetical protein
RA	5,786,988	C→A	5.3%	S134* (TCG→TAG)	trxC →	thioredoxin
RA	5,786,991	T→G	5.3%	L135R (CTG→CGG)	trxC →	thioredoxin
RA	5,790,143	A→T	9.0%	intergenic (+22/+46)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,790,150	A→G	13.2%	intergenic (+29/+39)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,790,151	C→G	9.3%	intergenic (+30/+38)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,790,152	C→T	9.2%	intergenic (+31/+37)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,790,159	A→T	9.2%	intergenic (+38/+30)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,790,620	A→T	7.1%	intergenic (‑24/+33)	PP_5073 ← / ← hemE	hypothetical protein/uroporphyrinogen decarboxylase
RA	5,807,984	A→G	7.9%	intergenic (+119/+36)	mrcA → / ← maeB	penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B
RA	5,807,985	T→C	7.8%	intergenic (+120/+35)	mrcA → / ← maeB	penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B
RA	5,807,986	G→A	7.8%	intergenic (+121/+34)	mrcA → / ← maeB	penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B
RA	5,807,987	C→T	7.9%	intergenic (+122/+33)	mrcA → / ← maeB	penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B
RA	5,815,536	G→T	7.4%	intergenic (+20/+71)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,815,539	A→C	7.4%	intergenic (+23/+68)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,815,544	A→G	6.0%	intergenic (+28/+63)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,821,897	T→A	7.2%	L173Q (CTG→CAG)	metW →	methionine biosynthesis protein MetW
RA	5,825,478	G→T	7.0%	intergenic (‑6/+4)	trmB ← / ← thiG	tRNA (guanosine(46)‑N7)‑methyltransferase TrmB/thiazole synthase
RA	5,831,840	A→C	12.6%	L102V (TTG→GTG)	ftsY ←	signal recognition particle protein translocation receptor GTPase
RA	5,832,870	A→T	10.8%	K166* (AAG→TAG) ‡	PP_5112 →	peptidase
RA	5,832,871	A→T	10.3%	K166M (AAG→ATG) ‡	PP_5112 →	peptidase
RA	5,836,583	G→A	9.5%	L226L (TTG→TTA)	PP_5115 →	zinc protease
RA	5,863,461	G→C	7.8%	S143W (TCG→TGG)	PP_5138 ←	LysR family transcriptional regulator
RA	5,863,468	C→T	7.8%	A141T (GCG→ACG)	PP_5138 ←	LysR family transcriptional regulator
RA	5,863,469	G→C	11.8%	A140A (GCC→GCG)	PP_5138 ←	LysR family transcriptional regulator
RA	5,866,724	T→A	6.8%	intergenic (+47/+10)	PP_5140 → / ← thyA	MerR family transcriptional regulator/thymidylate synthase
RA	5,867,228	G→A	6.5%	Q160* (CAG→TAG)	thyA ←	thymidylate synthase
RA	5,868,017	C→T	11.0%	E183K (GAG→AAG)	lgt ←	prolipoprotein diacylglyceryl transferase
RA	5,868,018	A→G	10.9%	L182L (CTT→CTC)	lgt ←	prolipoprotein diacylglyceryl transferase
RA	5,882,091	C→G	7.4%	Q218E (CAG→GAG) ‡	serA →	bifunctional D‑3‑phosphoglycerate dehydrogenase/alpha‑ketoglutarate reductase
RA	5,882,092	A→G	7.0%	Q218R (CAG→CGG) ‡	serA →	bifunctional D‑3‑phosphoglycerate dehydrogenase/alpha‑ketoglutarate reductase
RA	5,882,346	A→G	9.8%	N303D (AAC→GAC) ‡	serA →	bifunctional D‑3‑phosphoglycerate dehydrogenase/alpha‑ketoglutarate reductase
RA	5,882,348	C→T	9.8%	N303N (AAC→AAT) ‡	serA →	bifunctional D‑3‑phosphoglycerate dehydrogenase/alpha‑ketoglutarate reductase
RA	5,882,349	A→G	9.8%	I304V (ATC→GTC) ‡	serA →	bifunctional D‑3‑phosphoglycerate dehydrogenase/alpha‑ketoglutarate reductase
RA	5,882,351	C→T	9.8%	I304I (ATC→ATT) ‡	serA →	bifunctional D‑3‑phosphoglycerate dehydrogenase/alpha‑ketoglutarate reductase
RA	5,882,699	C→A	9.6%	intergenic (+30/+18)	serA → / ← PP_5156	bifunctional D‑3‑phosphoglycerate dehydrogenase/alpha‑ketoglutarate reductase/hypothetical protein
RA	5,882,700	T→C	9.5%	intergenic (+31/+17)	serA → / ← PP_5156	bifunctional D‑3‑phosphoglycerate dehydrogenase/alpha‑ketoglutarate reductase/hypothetical protein
RA	5,882,701	G→C	9.3%	intergenic (+32/+16)	serA → / ← PP_5156	bifunctional D‑3‑phosphoglycerate dehydrogenase/alpha‑ketoglutarate reductase/hypothetical protein
RA	5,882,702	G→A	9.4%	intergenic (+33/+15)	serA → / ← PP_5156	bifunctional D‑3‑phosphoglycerate dehydrogenase/alpha‑ketoglutarate reductase/hypothetical protein
RA	5,883,595	C→G	13.7%	A60G (GCC→GGC)	PP_5157 →	hypothetical protein
RA	5,886,764	C→G	5.5%	W84C (TGG→TGC)	PP_5161 ←	lysophospholipase
RA	5,886,769	C→G	6.3%	A83P (GCA→CCA)	PP_5161 ←	lysophospholipase
RA	5,903,164	G→T	15.2%	intergenic (‑128/‑140)	PP_5175 ← / → PP_5176	HlyD family secretion protein/hypothetical protein
RA	5,903,165	A→C	17.9%	intergenic (‑129/‑139)	PP_5175 ← / → PP_5176	HlyD family secretion protein/hypothetical protein
RA	5,909,094	C→T	6.8%	A43T (GCC→ACC)	spuD ←	spermidine/putrescine ABC transporter substrate‑binding protein
RA	5,931,111	G→C	6.2%	P320R (CCA→CGA)	ubiH ←	2‑octaprenyl‑6‑methoxyphenyl hydroxylase
RA	5,932,011	A→G	8.8%	L20S (TTG→TCG) ‡	ubiH ←	2‑octaprenyl‑6‑methoxyphenyl hydroxylase
RA	5,932,012	A→G	8.8%	L20L (TTG→CTG) ‡	ubiH ←	2‑octaprenyl‑6‑methoxyphenyl hydroxylase
RA	5,935,336	G→C	7.2%	R119R (CGG→CGC)	fau →	5‑formyltetrahydrofolate cyclo‑ligase
RA	5,935,338:1	+A	7.4%	coding (359/609 nt)	fau →	5‑formyltetrahydrofolate cyclo‑ligase
RA	5,935,343	Δ1 bp	7.1%	coding (364/609 nt)	fau →	5‑formyltetrahydrofolate cyclo‑ligase
RA	5,935,346	G→C	7.2%	A123P (GCG→CCG)	fau →	5‑formyltetrahydrofolate cyclo‑ligase
RA	5,938,098	T→C	9.1%	L220P (CTG→CCG)	rbbA →	ribosome‑associated ATPase
RA	5,938,660	C→A	9.0%	R407R (CGC→CGA)	rbbA →	ribosome‑associated ATPase
RA	5,938,662	T→A	7.7%	L408Q (CTG→CAG)	rbbA →	ribosome‑associated ATPase
RA	5,938,664	T→G	8.0%	S409A (TCG→GCG)	rbbA →	ribosome‑associated ATPase
RA	5,948,143	A→C	76.4%	F111V (TTC→GTC)	rho ←	transcription termination factor Rho
RA	5,948,346	G→A	21.1%	A43V (GCG→GTG)	rho ←	transcription termination factor Rho
RA	5,949,920	G→C	8.2%	A213P (GCT→CCT) ‡	ppx →	exopolyphosphatase
RA	5,949,922	T→G	7.3%	A213A (GCT→GCG) ‡	ppx →	exopolyphosphatase
RA	5,949,925	C→A	7.0%	I214I (ATC→ATA)	ppx →	exopolyphosphatase
RA	5,949,927	G→C	7.0%	G215A (GGC→GCC)	ppx →	exopolyphosphatase
RA	5,953,291	A→G	5.5%	E21G (GAA→GGA)	PP_5218 →	DedA family protein
RA	5,957,525	A→T	7.9%	D310V (GAC→GTC)	cyaA →	adenylate cyclase
RA	5,957,527	C→G	7.9%	L311V (CTC→GTC) ‡	cyaA →	adenylate cyclase
RA	5,957,528	T→A	7.9%	L311H (CTC→CAC) ‡	cyaA →	adenylate cyclase
RA	5,957,529	C→G	8.3%	L311L (CTC→CTG) ‡	cyaA →	adenylate cyclase
RA	5,957,531	A→T	8.3%	D312V (GAC→GTC)	cyaA →	adenylate cyclase
RA	5,970,525	A→G	8.9%	W257R (TGG→CGG)	PP_5236 ←	hypothetical protein
RA	5,970,526	G→C	8.8%	R256R (CGC→CGG) ‡	PP_5236 ←	hypothetical protein
RA	5,970,527	C→T	8.7%	R256H (CGC→CAC) ‡	PP_5236 ←	hypothetical protein
RA	5,978,903	G→T	9.5%	R72S (CGC→AGC)	PP_5241 ←	LuxR family transcriptional regulator
RA	5,978,905	A→C	9.2%	L71R (CTG→CGG)	PP_5241 ←	LuxR family transcriptional regulator
RA	5,979,975	T→A	10.9%	L207* (TTA→TAA)	PP_5242 →	GAF domain‑containing sensor histidine kinase
RA	5,984,436	T→C	7.6%	intergenic (+32/+57)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,444	T→C	7.1%	intergenic (+40/+49)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,449	T→C	6.9%	intergenic (+45/+44)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,455	G→A	7.0%	intergenic (+51/+38)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,986,841	T→A	100%	intergenic (+121/‑78)	PP_5245 → / → kefB‑III	AraC family transcriptional regulator/glutathione‑regulated potassium/H+ antiporter
RA	5,988,809	G→A	17.5%	intergenic (+103/‑443)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,819	T→C	23.3%	intergenic (+113/‑433)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,824	C→T	17.5%	intergenic (+118/‑428)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,825	G→T	17.9%	intergenic (+119/‑427)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,826	C→T	17.8%	intergenic (+120/‑426)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,829	A→G	17.6%	intergenic (+123/‑423)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,835	G→C	17.4%	intergenic (+129/‑417)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,837	C→G	19.8%	intergenic (+131/‑415)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,840	C→T	18.2%	intergenic (+134/‑412)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,844	C→G	25.3%	intergenic (+138/‑408)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,848	C→T	24.6%	intergenic (+142/‑404)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,850	C→T	23.8%	intergenic (+144/‑402)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,889	C→A	27.0%	intergenic (+183/‑363)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,894	C→T	27.0%	intergenic (+188/‑358)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,895	A→G	27.0%	intergenic (+189/‑357)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,905	T→C	29.7%	intergenic (+199/‑347)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,911	Δ1 bp	34.3%	intergenic (+205/‑341)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,999,566	Δ1 bp	6.3%	coding (101/1428 nt)	PP_5256 →	cyclic nucleotide‑binding protein
RA	6,004,526	G→T	6.2%	G152V (GGC→GTC) ‡	PP_5259 →	LysR family transcriptional regulator
RA	6,004,527	C→G	6.1%	G152G (GGC→GGG) ‡	PP_5259 →	LysR family transcriptional regulator
RA	6,004,528	A→C	6.1%	T153P (ACC→CCC)	PP_5259 →	LysR family transcriptional regulator
RA	6,013,836	G→A	16.6%	intergenic (+41/+69)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,838	A→G	16.6%	intergenic (+43/+67)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,845	G→C	18.2%	intergenic (+50/+60)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,846	T→G	21.2%	intergenic (+51/+59)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,847	C→T	17.3%	intergenic (+52/+58)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,852	A→G	17.4%	intergenic (+57/+53)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,854	G→C	16.6%	intergenic (+59/+51)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,861	C→T	16.4%	intergenic (+66/+44)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,863	T→C	13.8%	intergenic (+68/+42)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,885	T→C	100%	intergenic (+90/+20)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,021,700	T→G	16.0%	intergenic (‑51/‑93)	PP_5272 ← / → PP_5273	hypothetical protein/oxidoreductase
RA	6,021,701	C→A	16.2%	intergenic (‑52/‑92)	PP_5272 ← / → PP_5273	hypothetical protein/oxidoreductase
RA	6,023,159	G→A	11.7%	intergenic (+74/+70)	PP_5273 → / ← PP_5274	oxidoreductase/hypothetical protein
RA	6,023,160	T→C	12.0%	intergenic (+75/+69)	PP_5273 → / ← PP_5274	oxidoreductase/hypothetical protein
RA	6,026,544	G→T	7.8%	V472V (GTG→GTT)	PP_5276 →	phospholipase D family protein
RA	6,026,619	C→T	9.7%	G497G (GGC→GGT)	PP_5276 →	phospholipase D family protein
RA	6,039,241	A→C	6.0%	intergenic (‑261/+33)	PP_5290 ← / ← pyrE	transposase/orotate phosphoribosyltransferase
RA	6,040,794	T→A	10.9%	intergenic (+19/+15)	PP_5292 → / ← PP_5293	catabolite repression control protein/hypothetical protein
RA	6,046,717	G→A	7.0%	P261S (CCG→TCG)	puuA‑II ←	glutamate‑putrescine ligase
RA	6,049,292	G→A	6.1%	V52M (GTG→ATG)	spoT →	bifunctional (p)ppGpp synthase/hydrolase
RA	6,071,883	C→G	7.1%	L214F (TTG→TTC)	pstB‑II ←	phosphate ABC transporter ATP‑binding protein
RA	6,080,138	A→T	5.2%	I28F (ATC→TTC) ‡	PP_5332 →	hypothetical protein
RA	6,080,139	T→G	5.1%	I28S (ATC→AGC) ‡	PP_5332 →	hypothetical protein
RA	6,080,148	A→T	5.2%	Q31L (CAG→CTG)	PP_5332 →	hypothetical protein
RA	6,080,988	T→A	8.5%	intergenic (+35/+27)	PP_5332 → / ← PP_5333	hypothetical protein/hypothetical protein
RA	6,080,989	T→A	8.5%	intergenic (+36/+26)	PP_5332 → / ← PP_5333	hypothetical protein/hypothetical protein
RA	6,082,339	A→G	5.9%	L232S (TTG→TCG)	purK ←	5‑(carboxyamino)imidazole ribonucleotide synthase
RA	6,106,043	T→G	5.5%	D139A (GAC→GCC)	PP_5355 ←	sodium/proton antiporter
RA	6,106,046	T→C	5.6%	N138S (AAC→AGC)	PP_5355 ←	sodium/proton antiporter
RA	6,106,048	G→C	5.6%	L137L (CTC→CTG)	PP_5355 ←	sodium/proton antiporter
RA	6,106,053	C→A	6.1%	A136S (GCG→TCG)	PP_5355 ←	sodium/proton antiporter
RA	6,106,059	C→A	5.8%	V134F (GTC→TTC)	PP_5355 ←	sodium/proton antiporter
RA	6,108,335	G→C	13.5%	W23C (TGG→TGC)	PP_5358 →	hypothetical protein
RA	6,127,616	T→C	8.6%	Q90R (CAG→CGG)	PP_5375 ←	LysR family transcriptional regulator
RA	6,128,789	A→G	7.1%	intergenic (‑905/‑17)	PP_5375 ← / → PP_5376	LysR family transcriptional regulator/hypothetical protein
RA	6,158,981	C→T	8.1%	intergenic (+318/+550)	PP_5739 → / ← PP_5402	hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit
RA	6,158,983	C→G	7.9%	intergenic (+320/+548)	PP_5739 → / ← PP_5402	hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit
RA	6,158,984	T→A	7.9%	intergenic (+321/+547)	PP_5739 → / ← PP_5402	hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit
RA	6,158,985	C→G	7.8%	intergenic (+322/+546)	PP_5739 → / ← PP_5402	hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit
RA	6,158,987	A→G	7.8%	intergenic (+324/+544)	PP_5739 → / ← PP_5402	hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit
RA	6,160,979	C→A	6.7%	S151R (AGC→AGA)	PP_5740 →	hypothetical protein

Unassigned missing coverage evidence
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	171363–176301	176301	1–4939	19 [18]	[17] 19	PP_16SA–[PP_5SA]	PP_16SA,PP_23SA,[PP_5SA]
*	*	÷	NC_002947	176653–181719	181719	1–5067	19 [17]	[17] 19	PP_16SB–[PP_r01]	PP_16SB,PP_23SB,[PP_r01]
*	*	÷	NC_002947	1124539	1124614	76	19 [18]	[15] 19	gcvT‑I	aminomethyltransferase
*	*	÷	NC_002947	2038211	2038388	178	19 [17]	[18] 19	[rffE]	[rffE]
*	*	÷	NC_002947	2837009	2837223	215	20 [18]	[18] 19	[sad‑I]	[sad‑I]

Unassigned new junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	28428 =	39 (0.740)	3 (0.060)	3/244	NT	7.5%	coding (1120/1698 nt)	PP_0024	membrane‑associated metal‑dependent hydrolase
	?	NC_002947	28458 =	37 (0.730)					coding (1090/1698 nt)	PP_0024	membrane‑associated metal‑dependent hydrolase
*	?	NC_002947	33457 =	57 (1.080)	3 (0.060)	3/236	NT	5.5%	coding (565/675 nt)	czcR‑I	heavy metal two‑component system response regulator
	?	NC_002947	33502 =	51 (1.040)					coding (610/675 nt)	czcR‑I	heavy metal two‑component system response regulator
*	?	NC_002947	35503 =	56 (1.060)	3 (0.060)	3/242	NT	5.7%	coding (125/588 nt)	PP_0031	hypothetical protein
	?	NC_002947	35545 =	46 (0.910)					coding (83/588 nt)	PP_0031	hypothetical protein
*	?	NC_002947	43823 =	39 (0.740)	4 (0.080)	4/236	NT	9.2%	coding (1702/1998 nt)	cadA‑I	cadmium translocating P‑type ATPase
	?	NC_002947	43868 =	43 (0.880)					coding (1657/1998 nt)	cadA‑I	cadmium translocating P‑type ATPase
*	?	NC_002947	= 60458	66 (1.250)	8 (0.160)	8/242	NT	12.9%	coding (151/1293 nt)	PP_0051	sigma‑54 dependent transcriptional regulator
	?	NC_002947	= 60509	45 (0.890)					coding (100/1293 nt)	PP_0051	sigma‑54 dependent transcriptional regulator
*	?	NC_002947	= 80502	46 (0.870)	3 (0.060)	3/238	NT	6.2%	coding (117/558 nt)	tsaC	threonylcarbamoyl‑AMP synthase
	?	NC_002947	= 80527	47 (0.950)					coding (142/558 nt)	tsaC	threonylcarbamoyl‑AMP synthase
*	?	NC_002947	102940 =	54 (1.020)	3 (0.060)	3/238	NT	5.1%	coding (1760/2052 nt)	prlC	oligopeptidase A
	?	NC_002947	103008 =	61 (1.230)					coding (1828/2052 nt)	prlC	oligopeptidase A
*	?	NC_002947	= 153156	58 (1.100)	4 (0.080)	4/244	NT	7.2%	coding (451/1407 nt)	PP_0144	insulinase family metalloprotease
	?	NC_002947	= 153189	48 (0.950)					coding (418/1407 nt)	PP_0144	insulinase family metalloprotease
*	?	NC_002947	154750 =	57 (1.080)	4 (0.080)	4/244	NT	7.4%	coding (546/1659 nt)	yjbB	Na+/Pi‑cotransporter
	?	NC_002947	154792 =	46 (0.910)					coding (504/1659 nt)	yjbB	Na+/Pi‑cotransporter
*	?	NC_002947	189276 =	70 (1.330)	4 (0.080)	4/244	NT	6.0%	coding (1385/1947 nt)	PP_0165	GGDEF domain‑containing protein
	?	NC_002947	189321 =	58 (1.140)					coding (1430/1947 nt)	PP_0165	GGDEF domain‑containing protein
*	?	NC_002947	= 196021	86 (1.630)	6 (0.120)	6/246	NT	6.7%	coding (1527/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	= 196641	NA (NA)					coding (2147/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	247035 =	0 (0.000)	64 (1.220)	52/252	NT	73.1%	coding (1213/1911 nt)	yheS	ABC transporter ATP‑binding protein
	?	NC_002947	= 2179376	47 (0.900)					intergenic (+175/+93)	PP_1931/PP_5486	hypothetical protein/hypothetical protein
*	?	NC_002947	= 247038	1 (0.020)	60 (1.140)	50/252	NT	69.8%	coding (1216/1911 nt)	yheS	ABC transporter ATP‑binding protein
	?	NC_002947	2177702 =	51 (0.970)					intergenic (+103/‑63)	PP_5485/PP_1931	GNAT family acetyltransferase/hypothetical protein
*	?	NC_002947	274817 =	55 (1.040)	4 (0.080)	4/248	NT	6.7%	coding (1131/1386 nt)	PP_0222	DszA family monooxygenase
	?	NC_002947	274850 =	57 (1.110)					coding (1098/1386 nt)	PP_0222	DszA family monooxygenase
*	?	NC_002947	= 301396	67 (1.270)	4 (0.080)	4/242	NT	6.2%	coding (315/741 nt)	ompR	two‑component system DNA‑binding response regulator
	?	NC_002947	= 301467	58 (1.150)					coding (386/741 nt)	ompR	two‑component system DNA‑binding response regulator
*	?	NC_002947	= 316954	59 (1.120)	4 (0.080)	4/242	NT	6.5%	coding (977/1407 nt)	dctD‑I	C4‑dicarboxylate transport transcriptional regulator
	?	NC_002947	= 316978	58 (1.150)					coding (953/1407 nt)	dctD‑I	C4‑dicarboxylate transport transcriptional regulator
*	?	NC_002947	319049 =	56 (1.060)	3 (0.060)	3/238	NT	5.4%	coding (693/1815 nt)	PP_0264	sensor histidine kinase
	?	NC_002947	319095 =	53 (1.070)					coding (647/1815 nt)	PP_0264	sensor histidine kinase
*	?	NC_002947	320890 =	53 (1.000)	3 (0.060)	3/242	NT	5.8%	coding (284/1107 nt)	aguA	agmatine deiminase
	?	NC_002947	320939 =	47 (0.930)					coding (333/1107 nt)	aguA	agmatine deiminase
*	?	NC_002947	375996 =	50 (0.950)	5 (0.100)	3/236	NT	10.7%	coding (43/771 nt)	PP_0313	electron transfer flavoprotein subunit beta
	?	NC_002947	376052 =	37 (0.750)					coding (99/771 nt)	PP_0313	electron transfer flavoprotein subunit beta
*	?	NC_002947	= 401306	NA (NA)	4 (0.080)	4/242	NT	8.0%	coding (892/1059 nt)	PP_0334	transposase
	?	NC_002947	= 401377	48 (0.910)					coding (963/1059 nt)	PP_0334	transposase
*	?	NC_002947	406558 =	60 (1.140)	4 (0.080)	4/244	NT	6.8%	coding (1447/1641 nt)	aceF	AceF‑S‑acetyldihydrolipoate
	?	NC_002947	406593 =	52 (1.030)					coding (1412/1641 nt)	aceF	AceF‑S‑acetyldihydrolipoate
*	?	NC_002947	= 413617	31 (0.590)	4 (0.080)	3/240	NT	11.7%	coding (2571/2934 nt)	glnE	glutamate‑ammonia‑ligase adenylyltransferase
	?	NC_002947	= 413632	31 (0.620)					coding (2586/2934 nt)	glnE	glutamate‑ammonia‑ligase adenylyltransferase
*	?	NC_002947	= 427970	54 (1.020)	5 (0.100)	5/240	NT	9.0%	intergenic (‑172/+80)	PP_0350/PP_0351	ferrichrome‑iron receptor/transmembrane sensor
	?	NC_002947	= 427995	50 (1.000)					intergenic (‑197/+55)	PP_0350/PP_0351	ferrichrome‑iron receptor/transmembrane sensor
*	?	NC_002947	= 478290	19 (0.360)	6 (0.150)	5/194	NT	34.8%	intergenic (+38/+72)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
	?	NC_002947	= 478325	8 (0.200)					intergenic (+73/+37)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
*	?	NC_002947	486412 =	11 (0.210)	3 (0.070)	3/222	NT	12.6%	intergenic (‑98/+100)	apaG/rsmA	Co(2+)/Mg(2+) efflux protein/ribosomal RNA small subunit methyltransferase A
	?	NC_002947	486501 =	32 (0.690)					intergenic (‑187/+11)	apaG/rsmA	Co(2+)/Mg(2+) efflux protein/ribosomal RNA small subunit methyltransferase A
*	?	NC_002947	= 516851	59 (1.120)	3 (0.060)	3/234	NT	5.2%	coding (141/783 nt)	PP_0429	short‑chain dehydrogenase/reductase family oxidoreductase
	?	NC_002947	= 516873	54 (1.110)					coding (119/783 nt)	PP_0429	short‑chain dehydrogenase/reductase family oxidoreductase
*	?	NC_002947	531496 =	57 (1.080)	4 (0.080)	4/244	NT	6.7%	coding (461/750 nt)	coaX	type III pantothenate kinase
	?	NC_002947	531549 =	56 (1.100)					coding (514/750 nt)	coaX	type III pantothenate kinase
*	?	NC_002947	578284 =	53 (1.000)	4 (0.080)	3/234	NT	8.6%	coding (253/951 nt)	fdoH	formate dehydrogenase‑O subunit beta
	?	NC_002947	578345 =	36 (0.740)					coding (314/951 nt)	fdoH	formate dehydrogenase‑O subunit beta
*	?	NC_002947	= 582183	50 (0.950)	4 (0.080)	4/248	NT	7.4%	coding (49/1923 nt)	selB	selenocysteyl‑tRNA‑specific translation elongation factor
	?	NC_002947	= 582217	52 (1.010)					coding (83/1923 nt)	selB	selenocysteyl‑tRNA‑specific translation elongation factor
*	?	NC_002947	591512 =	49 (0.930)	5 (0.100)	5/242	NT	9.6%	coding (759/933 nt)	PP_0501	NAD‑dependent epimerase/dehydratase family protein
	?	NC_002947	591551 =	48 (0.950)					coding (798/933 nt)	PP_0501	NAD‑dependent epimerase/dehydratase family protein
*	?	NC_002947	= 606408	40 (0.760)	3 (0.060)	3/240	NT	7.8%	coding (236/744 nt)	PP_0521	hypothetical protein
	?	NC_002947	= 606463	33 (0.660)					coding (291/744 nt)	PP_0521	hypothetical protein
*	?	NC_002947	611304 =	NA (NA)	4 (0.080)	3/240	NT	NA	coding (201/966 nt)	PP_0526	transposase
	?	NC_002947	611346 =	NA (NA)					coding (243/966 nt)	PP_0526	transposase
*	?	NC_002947	611927 =	NA (NA)	4 (0.080)	4/236	NT	NA	coding (824/966 nt)	PP_0526	transposase
	?	NC_002947	611970 =	NA (NA)					coding (867/966 nt)	PP_0526	transposase
*	?	NC_002947	628689 =	55 (1.040)	4 (0.080)	4/242	NT	7.4%	coding (106/819 nt)	eutC	ethanolamine ammonia‑lyase subunit beta
	?	NC_002947	628740 =	48 (0.950)					coding (55/819 nt)	eutC	ethanolamine ammonia‑lyase subunit beta
*	?	NC_002947	649505 =	44 (0.830)	3 (0.060)	3/242	NT	6.4%	coding (173/1356 nt)	accC	acetyl‑CoA carboxylase biotin carboxylase subunit
	?	NC_002947	649553 =	46 (0.910)					coding (125/1356 nt)	accC	acetyl‑CoA carboxylase biotin carboxylase subunit
*	?	NC_002947	= 653135	50 (0.950)	3 (0.060)	3/242	NT	5.9%	coding (1608/1962 nt)	ctpL	methyl‑accepting chemotaxis protein CtpL
	?	NC_002947	= 653175	48 (0.950)					coding (1568/1962 nt)	ctpL	methyl‑accepting chemotaxis protein CtpL
*	?	NC_002947	678537 =	54 (1.020)	3 (0.060)	3/240	NT	6.2%	coding (481/1374 nt)	PP_0581	3‑oxoacyl‑ACP reductase
	?	NC_002947	678588 =	39 (0.780)					coding (430/1374 nt)	PP_0581	3‑oxoacyl‑ACP reductase
*	?	NC_002947	= 678543	51 (0.970)	3 (0.060)	3/240	NT	6.4%	coding (475/1374 nt)	PP_0581	3‑oxoacyl‑ACP reductase
	?	NC_002947	= 678580	39 (0.780)					coding (438/1374 nt)	PP_0581	3‑oxoacyl‑ACP reductase
*	?	NC_002947	= 688301	54 (1.020)	6 (0.120)	6/240	NT	9.8%	coding (1166/1182 nt)	ydgK	Bcr/CflA family multidrug resistance transporter
	?	NC_002947	= 688328	59 (1.180)					coding (7/183 nt)	PP_5446	hypothetical protein
*	?	NC_002947	= 710293	49 (0.930)	3 (0.060)	3/244	NT	5.9%	coding (91/2832 nt)	ileS	isoleucine‑‑tRNA ligase
	?	NC_002947	= 710321	49 (0.970)					coding (119/2832 nt)	ileS	isoleucine‑‑tRNA ligase
*	?	NC_002947	715298 =	36 (0.680)	4 (0.080)	4/244	NT	9.7%	coding (196/483 nt)	PP_0607	type IV pili biogenesis protein FimT
	?	NC_002947	715387 =	40 (0.790)					coding (107/483 nt)	PP_0607	type IV pili biogenesis protein FimT
*	?	NC_002947	724297 =	47 (0.890)	6 (0.120)	4/248	NT	12.9%	coding (334/861 nt)	PP_0618	branched‑chain amino acid ABC transporter permease
	?	NC_002947	724330 =	35 (0.680)					coding (301/861 nt)	PP_0618	branched‑chain amino acid ABC transporter permease
*	?	NC_002947	= 731541	49 (0.930)	4 (0.080)	4/242	NT	7.4%	coding (1081/2565 nt)	clpB	chaperone protein ClpB
	?	NC_002947	= 731561	53 (1.050)					coding (1101/2565 nt)	clpB	chaperone protein ClpB
*	?	NC_002947	737628 =	34 (0.640)	4 (0.080)	4/240	NT	10.7%	intergenic (+11/+101)	PP_0629/yacG	membrane protein/DNA gyrase inhibitor YacG
	?	NC_002947	737661 =	35 (0.700)					intergenic (+44/+68)	PP_0629/yacG	membrane protein/DNA gyrase inhibitor YacG
*	?	NC_002947	741470 =	NA (NA)	4 (0.080)	4/246	NT	5.2%	intergenic (+70/‑430)	PP_t12/PP_0635	tRNA‑Thr/group II intron‑encoding maturase
	?	NC_002947	2069163 =	76 (1.440)					intergenic (+10/‑464)	PP_t19/PP_1846	tRNA‑Ser/group II intron‑encoding maturase
*	?	NC_002947	742597 =	NA (NA)	4 (0.080)	4/248	NT	NA	coding (698/1422 nt)	PP_0635	group II intron‑encoding maturase
	?	NC_002947	742657 =	NA (NA)					coding (758/1422 nt)	PP_0635	group II intron‑encoding maturase
*	?	NC_002947	= 742793	NA (NA)	6 (0.120)	5/240	NT	NA	coding (894/1422 nt)	PP_0635	group II intron‑encoding maturase
	?	NC_002947	= 742819	NA (NA)					coding (920/1422 nt)	PP_0635	group II intron‑encoding maturase
*	?	NC_002947	742915 =	NA (NA)	18 (0.360)	12/242	NT	NA	coding (1016/1422 nt)	PP_0635	group II intron‑encoding maturase
	?	NC_002947	742945 =	NA (NA)					coding (1046/1422 nt)	PP_0635	group II intron‑encoding maturase
*	?	NC_002947	= 745549	NA (NA)	5 (0.100)	3/242	NT	NA	coding (950/1533 nt)	PP_0637	transposase
	?	NC_002947	= 745566	NA (NA)					coding (933/1533 nt)	PP_0637	transposase
*	?	NC_002947	= 746192	NA (NA)	3 (0.060)	3/248	NT	NA	coding (307/1533 nt)	PP_0637	transposase
	?	NC_002947	= 746226	NA (NA)					coding (273/1533 nt)	PP_0637	transposase
*	?	NC_002947	773996 =	41 (0.780)	4 (0.080)	3/242	NT	9.2%	coding (603/1419 nt)	PP_0665	glyceraldehyde‑3‑phosphate dehydrogenase
	?	NC_002947	774036 =	40 (0.800)					coding (643/1419 nt)	PP_0665	glyceraldehyde‑3‑phosphate dehydrogenase
*	?	NC_002947	784549 =	51 (0.970)	4 (0.080)	4/238	NT	7.4%	coding (1377/3831 nt)	PP_0672	sensory box protein
	?	NC_002947	784583 =	52 (1.050)					coding (1343/3831 nt)	PP_0672	sensory box protein
*	?	NC_002947	786592 =	45 (0.850)	8 (0.170)	8/232	NT	19.7%	intergenic (+14/‑291)	PP_0673/ettA	hypothetical protein/ADP/ATP ratio sensor/translation inhibitor
	?	NC_002947	786700 =	24 (0.500)					intergenic (+122/‑183)	PP_0673/ettA	hypothetical protein/ADP/ATP ratio sensor/translation inhibitor
*	?	NC_002947	= 806683	46 (0.870)	3 (0.060)	3/240	NT	6.6%	coding (647/2832 nt)	PP_0693	hypothetical protein
	?	NC_002947	= 806709	42 (0.840)					coding (621/2832 nt)	PP_0693	hypothetical protein
*	?	NC_002947	809229 =	57 (1.080)	4 (0.080)	4/242	NT	7.6%	coding (129/1335 nt)	PP_0695	hypothetical protein
	?	NC_002947	809268 =	43 (0.850)					coding (90/1335 nt)	PP_0695	hypothetical protein
*	?	NC_002947	814536 =	42 (0.800)	3 (0.060)	3/242	NT	7.1%	coding (24/1215 nt)	fsr‑I	fosmidomycin efflux system
	?	NC_002947	814584 =	39 (0.780)					coding (72/1215 nt)	fsr‑I	fosmidomycin efflux system
*	?	NC_002947	= 818952	50 (0.950)	4 (0.080)	4/248	NT	7.8%	coding (106/627 nt)	PP_0705	DNA‑3‑methyladenine glycosylase
	?	NC_002947	= 818998	46 (0.890)					coding (152/627 nt)	PP_0705	DNA‑3‑methyladenine glycosylase
*	?	NC_002947	851768 =	37 (0.700)	3 (0.060)	3/238	NT	7.0%	coding (547/1278 nt)	hemA	glutamyl‑tRNA reductase
	?	NC_002947	851831 =	45 (0.910)					coding (610/1278 nt)	hemA	glutamyl‑tRNA reductase
*	?	NC_002947	867935 =	40 (0.760)	4 (0.090)	4/224	NT	11.9%	intergenic (+33/+144)	PP_0750/mqo‑I	hypothetical protein/malate:quinone oxidoreductase
	?	NC_002947	867995 =	24 (0.520)					intergenic (+93/+84)	PP_0750/mqo‑I	hypothetical protein/malate:quinone oxidoreductase
*	?	NC_002947	872432 =	65 (1.230)	4 (0.080)	4/238	NT	6.5%	coding (730/1272 nt)	PP_0756	hypothetical protein
	?	NC_002947	872492 =	54 (1.090)					coding (670/1272 nt)	PP_0756	hypothetical protein
*	?	NC_002947	874284 =	45 (0.850)	3 (0.070)	3/210	NT	8.8%	intergenic (+21/‑138)	PP_0758/PP_0759	hypothetical protein/hypothetical protein
	?	NC_002947	874348 =	25 (0.570)					intergenic (+85/‑74)	PP_0758/PP_0759	hypothetical protein/hypothetical protein
*	?	NC_002947	= 885776	61 (1.150)	4 (0.080)	4/246	NT	6.8%	coding (1687/2718 nt)	PP_0767	LuxR family transcriptional regulator
	?	NC_002947	= 885814	51 (1.000)					coding (1725/2718 nt)	PP_0767	LuxR family transcriptional regulator
*	?	NC_002947	913904 =	61 (1.150)	4 (0.080)	4/246	NT	5.7%	coding (615/1743 nt)	fruA	PTS fructose transporter subunit IIBC
	?	NC_002947	913941 =	73 (1.430)					coding (652/1743 nt)	fruA	PTS fructose transporter subunit IIBC
*	?	NC_002947	928888 =	55 (1.040)	3 (0.060)	3/240	NT	6.3%	coding (16734/18933 nt)	PP_0806	surface adhesion protein
	?	NC_002947	928940 =	38 (0.760)					coding (16682/18933 nt)	PP_0806	surface adhesion protein
*	?	NC_002947	= 929449	54 (1.020)	3 (0.060)	3/240	NT	5.5%	coding (16173/18933 nt)	PP_0806	surface adhesion protein
	?	NC_002947	= 929502	52 (1.040)					coding (16120/18933 nt)	PP_0806	surface adhesion protein
*	?	NC_002947	953577 =	47 (0.890)	3 (0.060)	3/244	NT	6.2%	coding (386/624 nt)	cyoC	cytochrome bo terminal oxidase subunit III
	?	NC_002947	953626 =	45 (0.890)					coding (435/624 nt)	cyoC	cytochrome bo terminal oxidase subunit III
*	?	NC_002947	= 989423	47 (0.890)	5 (0.100)	5/240	NT	9.7%	coding (1275/1290 nt)	hisS	histidine‑‑tRNA ligase
	?	NC_002947	= 989438	49 (0.980)					coding (1290/1290 nt)	hisS	histidine‑‑tRNA ligase
*	?	NC_002947	= 1003693	62 (1.170)	4 (0.080)	4/238	NT	7.8%	coding (200/486 nt)	PP_0865	ECF subfamily RNA polymerase sigma‑24 factor
	?	NC_002947	= 1003761	37 (0.750)					coding (268/486 nt)	PP_0865	ECF subfamily RNA polymerase sigma‑24 factor
*	?	NC_002947	1083135 =	54 (1.020)	7 (0.140)	6/238	NT	13.3%	coding (2790/3822 nt)	PP_0938	hypothetical protein
	?	NC_002947	1083175 =	41 (0.830)					coding (2830/3822 nt)	PP_0938	hypothetical protein
*	?	NC_002947	1090127 =	56 (1.060)	3 (0.060)	3/238	NT	5.5%	coding (988/1380 nt)	fumC‑I	class 2 fumarate hydratase
	?	NC_002947	1090165 =	51 (1.030)					coding (1026/1380 nt)	fumC‑I	class 2 fumarate hydratase
*	?	NC_002947	1113976 =	55 (1.040)	3 (0.060)	3/244	NT	5.8%	coding (831/954 nt)	rlmF	ribosomal RNA large subunit methyltransferase F
	?	NC_002947	1114010 =	44 (0.870)					coding (797/954 nt)	rlmF	ribosomal RNA large subunit methyltransferase F
*	?	NC_002947	1114862 =	34 (0.640)	6 (0.120)	6/240	NT	16.4%	intergenic (‑56/+123)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
	?	NC_002947	1114954 =	29 (0.580)					intergenic (‑148/+31)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
*	?	NC_002947	1137997 =	40 (0.760)	3 (0.060)	3/240	NT	7.6%	coding (473/930 nt)	arcC	carbamate kinase
	?	NC_002947	1138051 =	35 (0.700)					coding (419/930 nt)	arcC	carbamate kinase
*	?	NC_002947	1157415 =	57 (1.080)	4 (0.080)	3/240	NT	7.2%	coding (903/1251 nt)	yihS	aldose‑ketose isomerase
	?	NC_002947	1157457 =	49 (0.980)					coding (945/1251 nt)	yihS	aldose‑ketose isomerase
*	?	NC_002947	= 1160962	51 (0.970)	3 (0.060)	3/238	NT	5.7%	coding (774/846 nt)	gtsC	mannose/glucose ABC transporter permease
	?	NC_002947	= 1160981	51 (1.030)					coding (793/846 nt)	gtsC	mannose/glucose ABC transporter permease
*	?	NC_002947	1166560 =	55 (1.040)	4 (0.080)	4/244	NT	6.6%	coding (945/1470 nt)	zwfA	glucose 6‑phosphate‑1‑dehydrogenase
	?	NC_002947	1166601 =	61 (1.200)					coding (986/1470 nt)	zwfA	glucose 6‑phosphate‑1‑dehydrogenase
*	?	NC_002947	= 1172789	57 (1.080)	4 (0.080)	4/240	NT	6.6%	coding (264/1380 nt)	xseA	exodeoxyribonuclease 7 large subunit
	?	NC_002947	= 1172829	60 (1.200)					coding (224/1380 nt)	xseA	exodeoxyribonuclease 7 large subunit
*	?	NC_002947	1188357 =	52 (0.980)	4 (0.080)	3/236	NT	8.1%	coding (3562/3900 nt)	purL	phosphoribosylformylglycinamidine synthase
	?	NC_002947	1188411 =	42 (0.860)					coding (3616/3900 nt)	purL	phosphoribosylformylglycinamidine synthase
*	?	NC_002947	1189708 =	38 (0.720)	3 (0.060)	3/238	NT	6.3%	coding (106/762 nt)	tatC‑I	Sec‑independent protein translocase protein
	?	NC_002947	1189773 =	54 (1.090)					coding (41/762 nt)	tatC‑I	Sec‑independent protein translocase protein
*	?	NC_002947	= 1202732	59 (1.120)	4 (0.080)	4/238	NT	6.3%	coding (561/1089 nt)	xcpY	type II secretion pathway protein XcpY
	?	NC_002947	= 1202787	63 (1.270)					coding (616/1089 nt)	xcpY	type II secretion pathway protein XcpY
*	?	NC_002947	1214538 =	45 (0.850)	4 (0.080)	4/240	NT	8.4%	coding (2421/4305 nt)	PP_1061	ATP‑dependent DNA helicase
	?	NC_002947	1214614 =	45 (0.900)					coding (2345/4305 nt)	PP_1061	ATP‑dependent DNA helicase
*	?	NC_002947	1215888 =	50 (0.950)	4 (0.080)	4/242	NT	8.9%	coding (1071/4305 nt)	PP_1061	ATP‑dependent DNA helicase
	?	NC_002947	1215925 =	34 (0.680)					coding (1034/4305 nt)	PP_1061	ATP‑dependent DNA helicase
*	?	NC_002947	= 1216282	39 (0.740)	4 (0.080)	4/234	NT	9.0%	coding (677/4305 nt)	PP_1061	ATP‑dependent DNA helicase
	?	NC_002947	= 1216314	45 (0.930)					coding (645/4305 nt)	PP_1061	ATP‑dependent DNA helicase
*	?	NC_002947	= 1218645	47 (0.890)	7 (0.140)	5/242	NT	12.6%	coding (182/1137 nt)	PP_1064	alpha/beta family hydrolase
	?	NC_002947	= 1218666	52 (1.030)					coding (203/1137 nt)	PP_1064	alpha/beta family hydrolase
*	?	NC_002947	= 1246683	54 (1.020)	5 (0.110)	4/214	NT	9.2%	intergenic (+84/‑287)	PP_1087/argG	OmpA family outer membrane protein/argininosuccinate synthase
	?	NC_002947	= 1246709	53 (1.190)					intergenic (+110/‑261)	PP_1087/argG	OmpA family outer membrane protein/argininosuccinate synthase
*	?	NC_002947	= 1252645	56 (1.060)	4 (0.080)	3/244	NT	7.4%	coding (165/972 nt)	PP_1095	electron transport complex protein
	?	NC_002947	= 1252684	47 (0.930)					coding (126/972 nt)	PP_1095	electron transport complex protein
*	?	NC_002947	1266340 =	44 (0.830)	3 (0.060)	3/244	NT	6.2%	coding (1648/2442 nt)	quiP	acyl‑homoserine lactone acylase QuiP
	?	NC_002947	1266412 =	49 (0.970)					coding (1576/2442 nt)	quiP	acyl‑homoserine lactone acylase QuiP
*	?	NC_002947	1273313 =	53 (1.000)	3 (0.060) +GCAGGCGACGCGGT	3/226	NT	6.4%	intergenic (+104/+64)	PP_1113/PP_1114	pyridoxal‑phosphate dependent enzyme family protein/SEC‑C domain‑containing protein
	?	NC_002947	3028128 =	45 (0.850)					intergenic (+2/‑220)	PP_2642/pcaY	GntR family transcriptional regulator/aromatic acid chemoreceptor
*	?	NC_002947	1286951 =	38 (0.720)	3 (0.060)	3/240	NT	7.2%	coding (334/2145 nt)	PP_1125	putative Helicase
	?	NC_002947	1286997 =	42 (0.840)					coding (380/2145 nt)	PP_1125	putative Helicase
*	?	NC_002947	= 1296790	NA (NA)	3 (0.060)	3/240	NT	NA	intergenic (‑543/‑23)	nhaA‑I/PP_1133	Na(+)/H(+) antiporter NhaA/transposase
	?	NC_002947	= 1296814	NA (NA)					coding (2/1329 nt)	PP_1133	transposase
*	?	NC_002947	1316938 =	56 (1.060)	4 (0.080)	4/238	NT	7.4%	coding (356/1989 nt)	PP_1150	membrane protein
	?	NC_002947	1316977 =	47 (0.950)					coding (395/1989 nt)	PP_1150	membrane protein
*	?	NC_002947	1318866 =	57 (1.080)	5 (0.100)	4/246	NT	9.5%	coding (90/870 nt)	PP_1152	membrane fusion efflux protein
	?	NC_002947	1318909 =	40 (0.780)					coding (133/870 nt)	PP_1152	membrane fusion efflux protein
*	?	NC_002947	1347195 =	45 (0.850)	3 (0.070)	3/218	NT	7.4%	intergenic (‑303/+101)	udh/galP‑I	uronate dehydrogenase/porin‑like protein
	?	NC_002947	1347287 =	37 (0.820)					intergenic (‑395/+9)	udh/galP‑I	uronate dehydrogenase/porin‑like protein
*	?	NC_002947	= 1357142	36 (0.680)	4 (0.080)	4/242	NT	9.8%	coding (323/1608 nt)	PP_1182	sensor histidine kinase
	?	NC_002947	= 1357169	39 (0.780)					coding (350/1608 nt)	PP_1182	sensor histidine kinase
*	?	NC_002947	= 1358263	57 (1.080)	5 (0.100)	5/244	NT	7.7%	coding (1444/1608 nt)	PP_1182	sensor histidine kinase
	?	NC_002947	= 1358320	65 (1.280)					coding (1501/1608 nt)	PP_1182	sensor histidine kinase
*	?	NC_002947	= 1375575	48 (0.910)	3 (0.060)	3/242	NT	5.8%	coding (1195/1911 nt)	kup	potassium transport system protein Kup
	?	NC_002947	= 1375601	51 (1.010)					coding (1221/1911 nt)	kup	potassium transport system protein Kup
*	?	NC_002947	1380487 =	60 (1.140)	3 (0.060) +CTGAC	3/244	NT	5.5%	intergenic (‑213/+49)	PP_1202/PP_t67	phospholipids modification protein/tRNA‑Met
	?	NC_002947	1380742 =	48 (0.910)					intergenic (‑130/+5)	PP_t67/PP_t66	tRNA‑Met/tRNA‑Met
*	?	NC_002947	1406547 =	38 (0.720)	4 (0.080)	4/246	NT	9.3%	coding (554/1353 nt)	puuP	putrescine permease
	?	NC_002947	1406582 =	41 (0.800)					coding (519/1353 nt)	puuP	putrescine permease
*	?	NC_002947	1419549 =	17 (0.320)	4 (0.080)	4/230	NT	13.2%	intergenic (‑38/+98)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
	?	NC_002947	= 5238649	37 (0.770)					coding (161/204 nt)	PP_5701	hypothetical protein
*	?	NC_002947	= 1421585	60 (1.140)	3 (0.060)	3/242	NT	5.0%	coding (166/1860 nt)	PP_1246	hypothetical protein
	?	NC_002947	= 1421610	56 (1.110)					coding (191/1860 nt)	PP_1246	hypothetical protein
*	?	NC_002947	= 1427100	NA (NA)	11 (0.210)	5/254	NT	NA	coding (998/1422 nt)	PP_1250	group II intron‑encoding maturase
	?	NC_002947	= 1427164	NA (NA)					coding (1062/1422 nt)	PP_1250	group II intron‑encoding maturase
*	?	NC_002947	1456210 =	51 (0.970)	4 (0.080)	4/246	NT	6.9%	coding (773/813 nt)	PP_1274	short‑chain dehydrogenase/reductase family oxidoreductase
	?	NC_002947	1456264 =	59 (1.150)					coding (719/813 nt)	PP_1274	short‑chain dehydrogenase/reductase family oxidoreductase
*	?	NC_002947	1465748 =	64 (1.210)	3 (0.060)	3/240	NT	5.4%	coding (1443/1560 nt)	algG	poly(beta‑D‑mannuronate) C5 epimerase
	?	NC_002947	1465806 =	44 (0.880)					coding (1385/1560 nt)	algG	poly(beta‑D‑mannuronate) C5 epimerase
*	?	NC_002947	= 1468458	34 (0.640)	6 (0.120)	4/242	NT	14.2%	coding (234/1479 nt)	algE	alginate production protein AlgE
	?	NC_002947	= 1468480	40 (0.800)					coding (212/1479 nt)	algE	alginate production protein AlgE
*	?	NC_002947	= 1479168	52 (0.980)	3 (0.060)	3/242	NT	5.2%	coding (232/471 nt)	moaC	cyclic pyranopterin monophosphate synthase accessory protein
	?	NC_002947	= 1479192	59 (1.170)					coding (256/471 nt)	moaC	cyclic pyranopterin monophosphate synthase accessory protein
*	?	NC_002947	= 1488528	29 (0.550)	4 (0.080)	4/244	NT	12.1%	coding (86/759 nt)	ybgI	metal‑binding hydrolase/oxidase
	?	NC_002947	= 1488537	30 (0.590)					coding (95/759 nt)	ybgI	metal‑binding hydrolase/oxidase
*	?	NC_002947	= 1499458	24 (0.450)	7 (0.130)	7/250	NT	25.6%	intergenic (+35/‑129)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
	?	NC_002947	= 1499495	17 (0.330)					intergenic (+72/‑92)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
*	?	NC_002947	1499507 =	17 (0.320)	9 (0.190)	9/230	NT	18.9%	intergenic (+84/‑80)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
	?	NC_002947	= 6060505	62 (1.300)					intergenic (+141/+40)	PP_5311/PP_5312	signal transduction protein/hypothetical protein
*	?	NC_002947	= 1543781	34 (0.640)	4 (0.080)	4/242	NT	11.5%	coding (585/1245 nt)	mdfA	multidrug MFS transporter
	?	NC_002947	= 1543810	29 (0.580)					coding (614/1245 nt)	mdfA	multidrug MFS transporter
*	?	NC_002947	= 1564136	52 (0.980)	4 (0.080)	4/244	NT	6.6%	coding (1193/1473 nt)	pitB	phosphate transporter
	?	NC_002947	= 1564229	63 (1.240)					coding (1100/1473 nt)	pitB	phosphate transporter
*	?	NC_002947	= 1581220	48 (0.910)	4 (0.080)	4/248	NT	7.8%	coding (177/3153 nt)	ttgB	efflux pump membrane protein TtgB
	?	NC_002947	= 1581255	48 (0.930)					coding (142/3153 nt)	ttgB	efflux pump membrane protein TtgB
*	?	NC_002947	1605278 =	34 (0.640)	3 (0.060)	3/242	NT	9.8%	coding (973/1707 nt)	PP_1407	sulfate transporter
	?	NC_002947	1605342 =	23 (0.460)					coding (909/1707 nt)	PP_1407	sulfate transporter
*	?	NC_002947	= 1612861	54 (1.020)	3 (0.060)	3/234	NT	5.9%	coding (658/693 nt)	ung	uracil‑DNA glycosylase
	?	NC_002947	= 1612883	46 (0.950)					coding (680/693 nt)	ung	uracil‑DNA glycosylase
*	?	NC_002947	= 1682222	36 (0.680)	4 (0.080)	3/236	NT	9.0%	coding (741/1710 nt)	recJ	ssDNA‑specific exonuclease RecJ
	?	NC_002947	= 1682252	47 (0.960)					coding (771/1710 nt)	recJ	ssDNA‑specific exonuclease RecJ
*	?	NC_002947	1684586 =	66 (1.250)	3 (0.060)	3/240	NT	5.0%	coding (286/333 nt)	hicB	HicB family nuclease
	?	NC_002947	1684636 =	51 (1.020)					coding (236/333 nt)	hicB	HicB family nuclease
*	?	NC_002947	= 1710542	44 (0.830)	3 (0.060)	3/246	NT	6.3%	coding (1161/2628 nt)	ppc	phosphoenolpyruvate carboxylase
	?	NC_002947	= 1710566	47 (0.920)					coding (1185/2628 nt)	ppc	phosphoenolpyruvate carboxylase
*	?	NC_002947	= 1716100	60 (1.140)	5 (0.100)	4/242	NT	7.2%	coding (216/690 nt)	PP_1511	hypothetical protein
	?	NC_002947	= 1716127	72 (1.430)					coding (243/690 nt)	PP_1511	hypothetical protein
*	?	NC_002947	1728639 =	57 (1.080)	4 (0.080)	4/238	NT	6.8%	intergenic (+33/+90)	cspA‑I/PP_1523	major cold shock protein/hypothetical protein
	?	NC_002947	1728692 =	56 (1.130)					intergenic (+86/+37)	cspA‑I/PP_1523	major cold shock protein/hypothetical protein
*	?	NC_002947	= 1762690	42 (0.800)	7 (0.140)	6/242	NT	14.0%	coding (324/477 nt)	PP_1569	hypothetical protein
	?	NC_002947	= 1762715	46 (0.910)					coding (349/477 nt)	PP_1569	hypothetical protein
*	?	NC_002947	1816815 =	67 (1.270)	6 (0.120)	6/242	NT	8.9%	coding (687/750 nt)	surE	5'‑nucleotidase SurE
	?	NC_002947	1816847 =	59 (1.170)					coding (719/750 nt)	surE	5'‑nucleotidase SurE
*	?	NC_002947	= 1820949	0 (0.000)	9 (0.180)	4/244	NT	100%	coding (712/1422 nt)	PP_1624	group II intron‑encoding maturase
	?	NC_002947	= 2070369	NA (NA)					coding (743/1422 nt)	PP_1846	group II intron‑encoding maturase
*	?	NC_002947	= 1843419	52 (0.980)	4 (0.080)	4/242	NT	6.6%	coding (1375/2754 nt)	gacS	sensor protein GacS
	?	NC_002947	= 1843446	64 (1.270)					coding (1348/2754 nt)	gacS	sensor protein GacS
*	?	NC_002947	= 1846324	62 (1.170)	4 (0.080)	4/244	NT	5.9%	coding (615/1377 nt)	pfeS‑II	histidine kinase
	?	NC_002947	= 1846357	67 (1.320)					coding (648/1377 nt)	pfeS‑II	histidine kinase
*	?	NC_002947	= 1862561	56 (1.060)	6 (0.120)	6/250	NT	9.9%	coding (247/1068 nt)	PP_1666	hypothetical protein
	?	NC_002947	= 1862581	54 (1.040)					coding (267/1068 nt)	PP_1666	hypothetical protein
*	?	NC_002947	1906968 =	50 (0.950)	4 (0.080)	4/238	NT	8.6%	coding (771/951 nt)	PP_1707	D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
	?	NC_002947	1907005 =	38 (0.770)					coding (734/951 nt)	PP_1707	D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
*	?	NC_002947	1917222 =	52 (0.980)	6 (0.120)	4/232	NT	11.6%	coding (1003/1083 nt)	PP_1718	EAL domain‑containing diguanylate phosphodiesterase
	?	NC_002947	1917301 =	44 (0.910)					coding (924/1083 nt)	PP_1718	EAL domain‑containing diguanylate phosphodiesterase
*	?	NC_002947	1922701 =	49 (0.930)	5 (0.100)	4/234	NT	9.3%	coding (543/990 nt)	PP_1722	ABC transporter ATP‑binding protein
	?	NC_002947	1922758 =	52 (1.070)					coding (486/990 nt)	PP_1722	ABC transporter ATP‑binding protein
*	?	NC_002947	= 1936355	46 (0.870)	5 (0.100)	4/246	NT	11.4%	coding (657/1149 nt)	PP_1736	hypothetical protein
	?	NC_002947	= 1936390	33 (0.650)					coding (692/1149 nt)	PP_1736	hypothetical protein
*	?	NC_002947	1941517 =	46 (0.870)	4 (0.080)	4/240	NT	8.5%	coding (59/864 nt)	betX	choline/betaine/carnitine ABC transporter substrate‑binding protein BetX
	?	NC_002947	1941547 =	43 (0.860)					coding (89/864 nt)	betX	choline/betaine/carnitine ABC transporter substrate‑binding protein BetX
*	?	NC_002947	1949570 =	54 (1.020)	3 (0.060)	3/232	NT	6.5%	coding (85/1746 nt)	PP_1749	acetyltransferase
	?	NC_002947	1949614 =	37 (0.770)					coding (41/1746 nt)	PP_1749	acetyltransferase
*	?	NC_002947	= 1958842	65 (1.230)	4 (0.080)	4/246	NT	5.8%	coding (222/1395 nt)	fumC‑II	class 2 fumarate hydratase
	?	NC_002947	= 1958879	68 (1.330)					coding (185/1395 nt)	fumC‑II	class 2 fumarate hydratase
*	?	NC_002947	= 1964581	51 (0.970)	4 (0.080)	3/238	NT	8.4%	coding (793/2526 nt)	yegE	phosphodiesterase domain‑containing diguanylate cyclase
	?	NC_002947	= 1964606	39 (0.790)					coding (818/2526 nt)	yegE	phosphodiesterase domain‑containing diguanylate cyclase
*	?	NC_002947	= 1967177	16 (0.300)	4 (0.100)	4/188	NT	27.8%	intergenic (+47/+72)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
	?	NC_002947	= 1967207	9 (0.230)					intergenic (+77/+42)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
*	?	NC_002947	2042760 =	55 (1.040)	4 (0.080)	4/244	NT	7.5%	coding (28/762 nt)	PP_1817	short‑chain dehydrogenase/reductase family oxidoreductase
	?	NC_002947	2042826 =	46 (0.910)					coding (94/762 nt)	PP_1817	short‑chain dehydrogenase/reductase family oxidoreductase
*	?	NC_002947	2050559 =	43 (0.810)	4 (0.110)	4/180	NT	17.6%	intergenic (‑52/+123)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
	?	NC_002947	2050669 =	7 (0.190)					intergenic (‑162/+13)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
*	?	NC_002947	= 2052922	47 (0.890)	4 (0.080)	4/248	NT	7.6%	coding (679/783 nt)	PP_1828	hypothetical protein
	?	NC_002947	= 2052948	51 (0.990)					coding (653/783 nt)	PP_1828	hypothetical protein
*	?	NC_002947	= 2059976	54 (1.020)	4 (0.080)	4/236	NT	6.9%	coding (653/939 nt)	PP_1836	ZIP family metal transporter
	?	NC_002947	= 2060009	57 (1.160)					coding (620/939 nt)	PP_1836	ZIP family metal transporter
*	?	NC_002947	2085881 =	NA (NA)	9 (0.170)	9/248	NT	NA	intergenic (+590/‑5)	PP_1864/PP_1865	hypothetical protein/transposase
	?	NC_002947	2085920 =	NA (NA)					coding (35/1302 nt)	PP_1865	transposase
*	?	NC_002947	2086243 =	NA (NA)	3 (0.060)	3/238	NT	NA	coding (358/1302 nt)	PP_1865	transposase
	?	NC_002947	2086305 =	NA (NA)					coding (420/1302 nt)	PP_1865	transposase
*	?	NC_002947	= 2086250	NA (NA)	5 (0.100)	4/238	NT	NA	coding (365/1302 nt)	PP_1865	transposase
	?	NC_002947	= 2086296	NA (NA)					coding (411/1302 nt)	PP_1865	transposase
*	?	NC_002947	2098415 =	53 (1.000)	3 (0.060)	3/226	NT	5.5%	coding (1475/2358 nt)	PP_1875	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	2098464 =	55 (1.170)					coding (1426/2358 nt)	PP_1875	two‑component system sensor histidine kinase/response regulator
*	?	NC_002947	2131993 =	43 (0.810)	4 (0.080)	4/244	NT	8.8%	coding (206/2496 nt)	fimD	type I pili subunit FimD
	?	NC_002947	2132040 =	42 (0.830)					coding (159/2496 nt)	fimD	type I pili subunit FimD
*	?	NC_002947	2149043 =	28 (0.530)	3 (0.060)	3/240	NT	9.9%	coding (1477/3276 nt)	rne	ribonuclease E
	?	NC_002947	2149087 =	28 (0.560)					coding (1433/3276 nt)	rne	ribonuclease E
*	?	NC_002947	= 2258741	85 (1.610)	6 (0.120)	5/246	NT	7.3%	coding (405/1005 nt)	asd	aspartate‑semialdehyde dehydrogenase
	?	NC_002947	= 2258794	71 (1.390)					coding (458/1005 nt)	asd	aspartate‑semialdehyde dehydrogenase
*	?	NC_002947	= 2258928	90 (1.700)	5 (0.100)	5/242	NT	5.2%	coding (592/1005 nt)	asd	aspartate‑semialdehyde dehydrogenase
	?	NC_002947	= 2258950	98 (1.950)					coding (614/1005 nt)	asd	aspartate‑semialdehyde dehydrogenase
*	?	NC_002947	2279749 =	104 (1.970)	7 (0.140)	7/240	NT	6.8%	coding (889/2082 nt)	fadH	2,4‑dienoyl‑CoA reductase
	?	NC_002947	2279775 =	94 (1.880)					coding (915/2082 nt)	fadH	2,4‑dienoyl‑CoA reductase
*	?	NC_002947	2286259 =	95 (1.800)	6 (0.120)	5/242	NT	5.9%	coding (544/888 nt)	PP_2014	membrane protein
	?	NC_002947	2286336 =	100 (1.990)					coding (621/888 nt)	PP_2014	membrane protein
*	?	NC_002947	2301453 =	0 (0.000)	97 (1.880)	71/248	NT	100%	intergenic (‑97/‑234)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
	?	NC_002947	2925429 =	NA (NA)					intergenic (‑177/+388)	PP_2563/PP_2564	antibiotic biosynthesis protein/quercetin 2,3‑dioxygenase
*	?	NC_002947	= 2301454	0 (0.000)	108 (2.080)	71/250	NT	100%	intergenic (‑98/‑233)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
	?	NC_002947	5545321 =	NA (NA)					intergenic (‑461/+416)	rpsF/rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
*	?	NC_002947	2303120 =	105 (1.990)	7 (0.150)	6/230	NT	8.1%	intergenic (‑205/+90)	PP_mr30/PP_2027	C4 ncRNA/hypothetical protein
	?	NC_002947	2303178 =	64 (1.340)					intergenic (‑263/+32)	PP_mr30/PP_2027	C4 ncRNA/hypothetical protein
*	?	NC_002947	= 2304170	82 (1.550)	6 (0.120)	5/238	NT	7.2%	coding (672/1632 nt)	PP_2027	hypothetical protein
	?	NC_002947	= 2304196	79 (1.600)					coding (646/1632 nt)	PP_2027	hypothetical protein
*	?	NC_002947	2320717 =	99 (1.870)	7 (0.140)	5/248	NT	7.0%	coding (524/945 nt)	PP_2041	LysR family transcriptional regulator
	?	NC_002947	2320742 =	89 (1.730)					coding (499/945 nt)	PP_2041	LysR family transcriptional regulator
*	?	NC_002947	2359112 =	91 (1.720)	5 (0.100)	4/238	NT	5.6%	coding (70/924 nt)	PP_2074	LysR family transcriptional regulator
	?	NC_002947	2359186 =	84 (1.700)					coding (144/924 nt)	PP_2074	LysR family transcriptional regulator
*	?	NC_002947	= 2374238	91 (1.720)	5 (0.100)	4/244	NT	5.3%	coding (1069/2376 nt)	ppsA	phosphoenolpyruvate synthetase
	?	NC_002947	= 2374257	90 (1.770)					coding (1088/2376 nt)	ppsA	phosphoenolpyruvate synthetase
*	?	NC_002947	2379567 =	106 (2.010)	7 (0.140)	7/248	NT	6.5%	intergenic (+22/‑68)	cmpX/PP_2088	protein CmpX/RNA polymerase sigma factor SigX
	?	NC_002947	2379609 =	99 (1.920)					intergenic (+64/‑26)	cmpX/PP_2088	protein CmpX/RNA polymerase sigma factor SigX
*	?	NC_002947	2389608 =	89 (1.680)	5 (0.100)	4/244	NT	5.4%	coding (469/2238 nt)	rlmKL	23S rRNA (guanine(2445)‑N(2))/(guanine(2069)‑N(7))‑ methyltransferase
	?	NC_002947	2389674 =	90 (1.770)					coding (535/2238 nt)	rlmKL	23S rRNA (guanine(2445)‑N(2))/(guanine(2069)‑N(7))‑ methyltransferase
*	?	NC_002947	2407945 =	111 (2.100)	7 (0.140)	6/246	NT	6.3%	coding (620/1566 nt)	PP_2111	aerotaxis receptor
	?	NC_002947	2408003 =	99 (1.940)					coding (562/1566 nt)	PP_2111	aerotaxis receptor
*	?	NC_002947	2409395 =	84 (1.590)	4 (0.080)	4/236	NT	5.3%	coding (2053/2742 nt)	acnA‑I	aconitate hydratase
	?	NC_002947	2409472 =	64 (1.300)					coding (1976/2742 nt)	acnA‑I	aconitate hydratase
*	?	NC_002947	= 2413155	NA (NA)	10 (0.200)	6/240	NT	100%	intergenic (+419/‑2)	rlmM/PP_2114	23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase
	?	NC_002947	= 2413186	0 (0.000)					coding (30/1302 nt)	PP_2114	transposase
*	?	NC_002947	= 2414829	86 (1.630)	5 (0.100)	3/238	NT	5.8%	coding (27/198 nt)	PP_2115	hypothetical protein
	?	NC_002947	= 2530695	NA (NA)					intergenic (+114/‑67)	PP_2218/PP_2219	transposase/hypothetical protein
*	?	NC_002947	2424212 =	97 (1.840)	5 (0.100)	5/236	NT	5.6%	intergenic (‑37/‑178)	PP_2124/yegS	glycosyl transferase/lipid kinase
	?	NC_002947	2424255 =	77 (1.570)					intergenic (‑80/‑135)	PP_2124/yegS	glycosyl transferase/lipid kinase
*	?	NC_002947	2426030 =	74 (1.400)	4 (0.080)	4/242	NT	5.6%	coding (864/942 nt)	PP_2127	sensor histidine kinase
	?	NC_002947	2426062 =	64 (1.270)					coding (832/942 nt)	PP_2127	sensor histidine kinase
*	?	NC_002947	2457316 =	87 (1.650)	5 (0.100)	5/238	NT	6.0%	coding (387/999 nt)	PP_2150	thiamine biosynthesis lipoprotein
	?	NC_002947	2457378 =	75 (1.520)					coding (449/999 nt)	PP_2150	thiamine biosynthesis lipoprotein
*	?	NC_002947	= 2465543	91 (1.720)	4 (0.080)	4/240	NT	5.3%	coding (95/1353 nt)	PP_2157	sensor histidine kinase
	?	NC_002947	= 2465600	57 (1.140)					coding (38/1353 nt)	PP_2157	sensor histidine kinase
*	?	NC_002947	2472102 =	93 (1.760)	3 (0.080)	3/176	NT	6.5%	intergenic (+6/+143)	PP_2166/PP_2167	anti‑anti‑sigma factor/PhoD‑like phosphatase
	?	NC_002947	2472226 =	22 (0.600)					intergenic (+130/+19)	PP_2166/PP_2167	anti‑anti‑sigma factor/PhoD‑like phosphatase
*	?	NC_002947	= 2474230	98 (1.860)	7 (0.140)	7/238	NT	7.1%	intergenic (‑135/+45)	PP_2167/tal	PhoD‑like phosphatase/transaldolase
	?	NC_002947	= 2474247	91 (1.840)					intergenic (‑152/+28)	PP_2167/tal	PhoD‑like phosphatase/transaldolase
*	?	NC_002947	2480384 =	121 (2.290)	8 (0.160)	7/242	NT	7.0%	coding (177/393 nt)	PP_2174	hypothetical protein
	?	NC_002947	2480429 =	96 (1.910)					coding (132/393 nt)	PP_2174	hypothetical protein
*	?	NC_002947	2567057 =	56 (1.060)	4 (0.080)	4/244	NT	7.5%	coding (871/879 nt)	PP_2250	LysR family transcriptional regulator
	?	NC_002947	2567103 =	45 (0.890)					coding (825/879 nt)	PP_2250	LysR family transcriptional regulator
*	?	NC_002947	= 2569069	26 (0.490)	4 (0.080)	4/242	NT	14.1%	coding (479/1050 nt)	PP_2252	hypothetical protein
	?	NC_002947	= 2569108	24 (0.480)					coding (440/1050 nt)	PP_2252	hypothetical protein
*	?	NC_002947	= 2581891	56 (1.060)	4 (0.080)	4/242	NT	6.7%	coding (243/801 nt)	PP_2263	sugar ABC transporter permease
	?	NC_002947	= 2581936	58 (1.150)					coding (288/801 nt)	PP_2263	sugar ABC transporter permease
*	?	NC_002947	2591383 =	53 (1.000)	5 (0.100)	4/244	NT	9.1%	coding (299/450 nt)	PP_2269	N‑acetylmuramoyl‑L‑alanine amidase
	?	NC_002947	2591422 =	49 (0.970)					coding (338/450 nt)	PP_2269	N‑acetylmuramoyl‑L‑alanine amidase
*	?	NC_002947	2625928 =	60 (1.140)	3 (0.060)	3/238	NT	5.2%	intergenic (+106/‑194)	PP_2297/PP_t40	integrase/tRNA‑His
	?	NC_002947	2625963 =	54 (1.090)					intergenic (+141/‑159)	PP_2297/PP_t40	integrase/tRNA‑His
*	?	NC_002947	2650701 =	64 (1.210)	4 (0.080)	4/242	NT	6.0%	intergenic (‑77/‑103)	PP_mr32/PP_2323	P14 ncRNA/hypothetical protein
	?	NC_002947	2650737 =	65 (1.290)					intergenic (‑113/‑67)	PP_mr32/PP_2323	P14 ncRNA/hypothetical protein
*	?	NC_002947	= 2675457	49 (0.930)	3 (0.060)	3/234	NT	5.6%	coding (678/1080 nt)	PP_2344	hypothetical protein
	?	NC_002947	= 2675485	56 (1.150)					coding (650/1080 nt)	PP_2344	hypothetical protein
*	?	NC_002947	= 2688065	34 (0.640)	4 (0.080)	4/240	NT	9.7%	coding (132/462 nt)	PP_2355	two‑component system response regulator
	?	NC_002947	= 2688121	42 (0.840)					coding (76/462 nt)	PP_2355	two‑component system response regulator
*	?	NC_002947	= 2693988	34 (0.640)	4 (0.080)	4/238	NT	11.5%	coding (279/2394 nt)	PP_2362	usher protein
	?	NC_002947	= 2694043	30 (0.610)					coding (334/2394 nt)	PP_2362	usher protein
*	?	NC_002947	= 2709668	52 (0.980)	4 (0.080)	4/244	NT	7.4%	coding (247/1077 nt)	PP_2372	sugar‑binding protein
	?	NC_002947	= 2709705	50 (0.990)					coding (284/1077 nt)	PP_2372	sugar‑binding protein
*	?	NC_002947	= 2717225	37 (0.700)	4 (0.080)	4/242	NT	9.2%	coding (1940/2301 nt)	cti	esterified fatty acid cis/trans isomerase
	?	NC_002947	= 2717281	44 (0.870)					coding (1996/2301 nt)	cti	esterified fatty acid cis/trans isomerase
*	?	NC_002947	= 2732066	60 (1.140)	4 (0.080)	4/242	NT	6.2%	coding (1403/2361 nt)	polB	DNA polymerase II
	?	NC_002947	= 2732091	64 (1.270)					coding (1428/2361 nt)	polB	DNA polymerase II
*	?	NC_002947	= 2734846	59 (1.120)	6 (0.120)	6/238	NT	10.0%	coding (1744/4422 nt)	PP_2394	leucine‑rich repeat‑containing protein
	?	NC_002947	= 2734867	53 (1.070)					coding (1765/4422 nt)	PP_2394	leucine‑rich repeat‑containing protein
*	?	NC_002947	= 2735070	42 (0.800)	3 (0.060)	3/242	NT	7.1%	coding (1968/4422 nt)	PP_2394	leucine‑rich repeat‑containing protein
	?	NC_002947	= 2735102	39 (0.780)					coding (2000/4422 nt)	PP_2394	leucine‑rich repeat‑containing protein
*	?	NC_002947	2739580 =	56 (1.060)	4 (0.080)	4/240	NT	7.4%	coding (1959/4494 nt)	PP_2395	leucine‑rich repeat‑containing protein
	?	NC_002947	2739650 =	47 (0.940)					coding (2029/4494 nt)	PP_2395	leucine‑rich repeat‑containing protein
*	?	NC_002947	2759788 =	69 (1.310)	5 (0.100)	5/248	NT	8.0%	coding (1155/1635 nt)	PP_2413	GGDEF domain‑containing protein
	?	NC_002947	2759857 =	47 (0.910)					coding (1086/1635 nt)	PP_2413	GGDEF domain‑containing protein
*	?	NC_002947	= 2772192	49 (0.930)	4 (0.080)	4/242	NT	7.4%	coding (624/906 nt)	PP_2425	AraC family transcriptional regulator
	?	NC_002947	= 2772220	53 (1.050)					coding (596/906 nt)	PP_2425	AraC family transcriptional regulator
*	?	NC_002947	= 2792854	55 (1.040)	4 (0.080)	4/242	NT	7.1%	coding (184/240 nt)	PP_5524	hypothetical protein
	?	NC_002947	= 2792876	52 (1.030)					coding (206/240 nt)	PP_5524	hypothetical protein
*	?	NC_002947	= 2804786	51 (0.970)	4 (0.080)	4/242	NT	9.1%	coding (599/1023 nt)	rbsR	DNA‑binding transcriptional repressor
	?	NC_002947	= 2804866	31 (0.620)					coding (679/1023 nt)	rbsR	DNA‑binding transcriptional repressor
*	?	NC_002947	2856265 =	39 (0.740)	3 (0.060)	3/246	NT	7.4%	coding (90/168 nt)	PP_2508	hypothetical protein
	?	NC_002947	2856332 =	37 (0.720)					coding (157/168 nt)	PP_2508	hypothetical protein
*	?	NC_002947	= 2890776	40 (0.760)	4 (0.080)	4/244	NT	8.4%	coding (116/819 nt)	tam	trans‑aconitate methyltransferase
	?	NC_002947	= 2890817	49 (0.970)					coding (157/819 nt)	tam	trans‑aconitate methyltransferase
*	?	NC_002947	= 2902753	53 (1.000)	3 (0.060)	3/246	NT	5.9%	coding (1835/1908 nt)	quiC	3‑dehydroshikimate dehydratase
	?	NC_002947	= 2902805	45 (0.880)					coding (1887/1908 nt)	quiC	3‑dehydroshikimate dehydratase
*	?	NC_002947	= 2903106	58 (1.100)	4 (0.080)	4/238	NT	6.7%	coding (470/681 nt)	PP_2555	hypothetical protein
	?	NC_002947	= 2903166	57 (1.150)					coding (410/681 nt)	PP_2555	hypothetical protein
*	?	NC_002947	2912904 =	54 (1.020)	3 (0.060)	3/244	NT	5.6%	coding (1924/10827 nt)	PP_2561	hemolysin‑type calcium‑binding bacteriocin
	?	NC_002947	2912950 =	50 (0.990)					coding (1970/10827 nt)	PP_2561	hemolysin‑type calcium‑binding bacteriocin
*	?	NC_002947	= 2924470	52 (0.980)	5 (0.100)	5/244	NT	8.6%	coding (783/2772 nt)	PP_2563	antibiotic biosynthesis protein
	?	NC_002947	= 2924501	56 (1.100)					coding (752/2772 nt)	PP_2563	antibiotic biosynthesis protein
*	?	NC_002947	= 2955609	52 (0.980)	4 (0.080)	4/244	NT	7.6%	coding (832/843 nt)	PP_2587	LuxR family transcriptional regulator
	?	NC_002947	= 2955628	48 (0.950)					intergenic (+8/‑35)	PP_2587/PP_2588	LuxR family transcriptional regulator/class III aminotransferase
*	?	NC_002947	2957391 =	66 (1.250)	4 (0.080)	4/248	NT	6.4%	coding (151/1494 nt)	PP_2589	aldehyde dehydrogenase family protein
	?	NC_002947	2957461 =	53 (1.030)					coding (221/1494 nt)	PP_2589	aldehyde dehydrogenase family protein
*	?	NC_002947	= 2963491	49 (0.930)	4 (0.080)	3/244	NT	7.4%	coding (441/942 nt)	PP_2593	ferric siderophore ABC transporter permease
	?	NC_002947	= 2963537	53 (1.040)					coding (395/942 nt)	PP_2593	ferric siderophore ABC transporter permease
*	?	NC_002947	2976750 =	62 (1.170)	5 (0.100)	5/236	NT	9.3%	coding (686/816 nt)	PP_2603	hypothetical protein
	?	NC_002947	2976817 =	40 (0.820)					coding (753/816 nt)	PP_2603	hypothetical protein
*	?	NC_002947	= 2992515	58 (1.100)	4 (0.080)	4/254	NT	7.0%	coding (558/870 nt)	PP_2616	hypothetical protein
	?	NC_002947	4610114 =	48 (0.910)					coding (601/876 nt)	PP_4081	type IV/VI secretion system protein
*	?	NC_002947	3010001 =	62 (1.170)	3 (0.060)	3/240	NT	5.1%	intergenic (‑907/‑761)	PP_2628/PP_2631	ABC transporter ATP‑binding protein/cellulose biosynthesis protein BcsF/YhjT
	?	NC_002947	3010043 =	54 (1.080)					intergenic (‑949/‑719)	PP_2628/PP_2631	ABC transporter ATP‑binding protein/cellulose biosynthesis protein BcsF/YhjT
*	?	NC_002947	3026426 =	32 (0.610)	4 (0.080)	5/244	NT	11.0%	coding (210/1800 nt)	PP_2641	iron‑sulfur cluster‑binding protein
	?	NC_002947	3026446 =	34 (0.670)					coding (190/1800 nt)	PP_2641	iron‑sulfur cluster‑binding protein
*	?	NC_002947	= 3030603	65 (1.230)	4 (0.080)	4/236	NT	6.0%	intergenic (+603/‑91)	pcaY/mgtA	aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
	?	NC_002947	= 3030618	66 (1.350)					intergenic (+618/‑76)	pcaY/mgtA	aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
*	?	NC_002947	3035075 =	31 (0.590)	4 (0.080)	4/246	NT	10.3%	coding (114/1227 nt)	PP_2647	MFS transporter
	?	NC_002947	3035106 =	40 (0.780)					coding (83/1227 nt)	PP_2647	MFS transporter
*	?	NC_002947	= 3042377	52 (0.980)	5 (0.100)	5/246	NT	8.6%	coding (280/315 nt)	PP_5537	membrane protein
	?	NC_002947	= 3042402	56 (1.090)					coding (305/315 nt)	PP_5537	membrane protein
*	?	NC_002947	3077546 =	34 (0.640)	3 (0.060)	3/242	NT	9.5%	coding (307/951 nt)	PP_2687	hypothetical protein
	?	NC_002947	3077581 =	25 (0.500)					coding (272/951 nt)	PP_2687	hypothetical protein
*	?	NC_002947	3088356 =	39 (0.740)	5 (0.100)	5/248	NT	12.0%	coding (189/930 nt)	metR‑II	homocysteine‑binding DNA‑binding transcriptional regulator
	?	NC_002947	3088387 =	35 (0.680)					coding (158/930 nt)	metR‑II	homocysteine‑binding DNA‑binding transcriptional regulator
*	?	NC_002947	= 3110329	49 (0.930)	4 (0.080)	4/244	NT	7.5%	intergenic (‑149/‑46)	yhdF/PP_2724	oxidoreductase YhdF/hypothetical protein
	?	NC_002947	= 3110355	51 (1.010)					intergenic (‑175/‑20)	yhdF/PP_2724	oxidoreductase YhdF/hypothetical protein
*	?	NC_002947	3115542 =	36 (0.680)	4 (0.080)	4/238	NT	9.8%	coding (280/1527 nt)	PP_2732	hypothetical protein
	?	NC_002947	3115585 =	40 (0.810)					coding (323/1527 nt)	PP_2732	hypothetical protein
*	?	NC_002947	3124321 =	64 (1.210)	4 (0.080)	4/234	NT	6.5%	coding (932/1638 nt)	PP_2741	membrane protein
	?	NC_002947	3124389 =	56 (1.150)					coding (864/1638 nt)	PP_2741	membrane protein
*	?	NC_002947	3126578 =	38 (0.720)	3 (0.060)	3/238	NT	8.0%	coding (847/960 nt)	PP_2744	ribose‑phosphate pyrophosphokinase family protein
	?	NC_002947	3126653 =	33 (0.670)					coding (772/960 nt)	PP_2744	ribose‑phosphate pyrophosphokinase family protein
*	?	NC_002947	= 3166415	51 (0.970)	9 (0.170)	6/252	NT	15.8%	coding (847/1299 nt)	PP_2780	3‑oxoacyl‑ACP synthase
	?	NC_002947	= 3166451	45 (0.860)					coding (883/1299 nt)	PP_2780	3‑oxoacyl‑ACP synthase
*	?	NC_002947	3221462 =	34 (0.640)	3 (0.060)	3/238	NT	9.7%	coding (1232/1653 nt)	PP_2823	methyl‑accepting chemotaxis transducer
	?	NC_002947	3221508 =	24 (0.490)					coding (1186/1653 nt)	PP_2823	methyl‑accepting chemotaxis transducer
*	?	NC_002947	= 3259439	63 (1.190)	4 (0.080)	4/246	NT	6.2%	coding (753/1452 nt)	PP_2856	hypothetical protein
	?	NC_002947	= 3259473	60 (1.170)					coding (719/1452 nt)	PP_2856	hypothetical protein
*	?	NC_002947	3265688 =	38 (0.720)	4 (0.080)	4/240	NT	9.3%	intergenic (+11/‑18)	uppP/PP_2863	undecaprenyl‑diphosphatase/membrane protein
	?	NC_002947	3265760 =	42 (0.840)					coding (55/378 nt)	PP_2863	membrane protein
*	?	NC_002947	3265777 =	45 (0.850)	5 (0.100)	5/240	NT	10.8%	coding (72/378 nt)	PP_2863	membrane protein
	?	NC_002947	3265829 =	40 (0.800)					coding (124/378 nt)	PP_2863	membrane protein
*	?	NC_002947	3306981 =	58 (1.100)	4 (0.080)	4/234	NT	6.6%	coding (618/696 nt)	csiR	DNA‑binding transcriptional repressor
	?	NC_002947	3307060 =	60 (1.230)					coding (539/696 nt)	csiR	DNA‑binding transcriptional repressor
*	?	NC_002947	3316859 =	47 (0.890)	5 (0.100)	5/244	NT	9.8%	intergenic (‑62/+111)	ribC/treSA	riboflavin synthase/trehalose synthase A
	?	NC_002947	3316895 =	47 (0.930)					intergenic (‑98/+75)	ribC/treSA	riboflavin synthase/trehalose synthase A
*	?	NC_002947	3350614 =	42 (0.800)	4 (0.080)	4/242	NT	9.3%	coding (1111/1404 nt)	PP_2945	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	3350656 =	38 (0.760)					coding (1153/1404 nt)	PP_2945	two‑component system sensor histidine kinase/response regulator
*	?	NC_002947	3359940 =	54 (1.020)	6 (0.120)	5/248	NT	11.5%	coding (1327/1581 nt)	PP_2956	ribosomal protein S6 modification protein‑like protein
	?	NC_002947	3359972 =	40 (0.780)					coding (1295/1581 nt)	PP_2956	ribosomal protein S6 modification protein‑like protein
*	?	NC_002947	= 3361099	60 (1.140)	6 (0.120)	6/234	NT	9.3%	coding (168/1581 nt)	PP_2956	ribosomal protein S6 modification protein‑like protein
	?	NC_002947	= 3361122	62 (1.270)					coding (145/1581 nt)	PP_2956	ribosomal protein S6 modification protein‑like protein
*	?	NC_002947	3371988 =	51 (0.970)	3 (0.060)	3/246	NT	5.9%	coding (85/288 nt)	csoR	copper utilization transcriptional regulator
	?	NC_002947	3372008 =	47 (0.920)					coding (65/288 nt)	csoR	copper utilization transcriptional regulator
*	?	NC_002947	3435438 =	60 (1.140)	3 (0.060)	3/240	NT	5.8%	coding (350/981 nt)	gpJ	baseplate/tail fiber protein
	?	NC_002947	3435478 =	41 (0.820)					coding (390/981 nt)	gpJ	baseplate/tail fiber protein
*	?	NC_002947	3456775 =	53 (1.000)	5 (0.100)	5/244	NT	8.0%	coding (514/771 nt)	hbdH	3‑hydroxybutyrate dehydrogenase
	?	NC_002947	3456819 =	64 (1.260)					coding (470/771 nt)	hbdH	3‑hydroxybutyrate dehydrogenase
*	?	NC_002947	= 3481685	28 (0.530)	4 (0.080)	4/238	NT	9.7%	coding (439/909 nt)	PP_5561	hypothetical protein
	?	NC_002947	= 3481746	48 (0.970)					coding (378/909 nt)	PP_5561	hypothetical protein
*	?	NC_002947	3483144 =	56 (1.060)	4 (0.080)	4/244	NT	7.3%	coding (2780/3804 nt)	PP_3091	membrane protein
	?	NC_002947	3483187 =	48 (0.950)					coding (2737/3804 nt)	PP_3091	membrane protein
*	?	NC_002947	3495957 =	44 (0.830)	3 (0.060)	3/242	NT	6.7%	coding (257/1503 nt)	puuD	uricase/urate oxidase
	?	NC_002947	3496003 =	41 (0.810)					coding (211/1503 nt)	puuD	uricase/urate oxidase
*	?	NC_002947	= 3516322	42 (0.800)	3 (0.060)	3/246	NT	7.3%	intergenic (+362/‑773)	PP_5576/PP_5578	hypothetical protein/hypothetical protein
	?	NC_002947	= 3516373	35 (0.680)					intergenic (+413/‑722)	PP_5576/PP_5578	hypothetical protein/hypothetical protein
*	?	NC_002947	= 3523486	NA (NA)	4 (0.080)	4/242	NT	NA	coding (199/1533 nt)	PP_3114	transposase
	?	NC_002947	= 3523529	NA (NA)					coding (242/1533 nt)	PP_3114	transposase
*	?	NC_002947	= 3568746	32 (0.610)	3 (0.060)	3/244	NT	8.2%	coding (1303/1998 nt)	PP_3150	hypothetical protein
	?	NC_002947	= 3568772	36 (0.710)					coding (1329/1998 nt)	PP_3150	hypothetical protein
*	?	NC_002947	3585445 =	50 (0.950)	4 (0.080)	4/240	NT	6.6%	coding (458/762 nt)	benD	1,6‑dihydroxycyclohexa‑2,4‑diene‑1‑carboxylate dehydrogenase
	?	NC_002947	3585515 =	66 (1.320)					coding (528/762 nt)	benD	1,6‑dihydroxycyclohexa‑2,4‑diene‑1‑carboxylate dehydrogenase
*	?	NC_002947	= 3608784	50 (0.950)	3 (0.060)	3/244	NT	6.1%	coding (333/2265 nt)	PP_3182	GGDEF domain‑containing protein
	?	NC_002947	= 3608817	45 (0.890)					coding (300/2265 nt)	PP_3182	GGDEF domain‑containing protein
*	?	NC_002947	= 3636026	54 (1.020)	4 (0.080)	3/240	NT	7.0%	coding (2424/2481 nt)	PP_3202	transporter
	?	NC_002947	= 3636052	56 (1.120)					coding (2450/2481 nt)	PP_3202	transporter
*	?	NC_002947	3636697 =	54 (1.020)	3 (0.060)	3/238	NT	5.8%	coding (625/1191 nt)	PP_3203	MFS transporter
	?	NC_002947	3636738 =	46 (0.930)					coding (666/1191 nt)	PP_3203	MFS transporter
*	?	NC_002947	= 3642402	50 (0.950)	4 (0.080)	4/244	NT	7.3%	coding (803/1431 nt)	PP_3209	isoxanthopterin deaminase
	?	NC_002947	= 3642441	53 (1.040)					coding (764/1431 nt)	PP_3209	isoxanthopterin deaminase
*	?	NC_002947	3655177 =	62 (1.170)	4 (0.080)	4/246	NT	6.2%	coding (1216/1620 nt)	PP_3220	ABC transporter ATP‑binding protein
	?	NC_002947	3655215 =	61 (1.190)					coding (1178/1620 nt)	PP_3220	ABC transporter ATP‑binding protein
*	?	NC_002947	= 3667666	41 (0.780)	4 (0.080)	4/242	NT	9.1%	coding (1021/1368 nt)	PP_3231	hypothetical protein
	?	NC_002947	= 3667696	41 (0.810)					coding (991/1368 nt)	PP_3231	hypothetical protein
*	?	NC_002947	= 3668091	36 (0.680)	4 (0.080)	4/242	NT	10.4%	coding (596/1368 nt)	PP_3231	hypothetical protein
	?	NC_002947	= 3668137	35 (0.700)					coding (550/1368 nt)	PP_3231	hypothetical protein
*	?	NC_002947	= 3691543	60 (1.140)	5 (0.100)	5/250	NT	8.2%	coding (276/600 nt)	PP_3257	putative Methyltransferase
	?	NC_002947	= 3691593	53 (1.020)					coding (226/600 nt)	PP_3257	putative Methyltransferase
*	?	NC_002947	= 3701042	38 (0.720)	3 (0.060)	3/240	NT	6.8%	coding (450/1053 nt)	PP_3266	hypothetical protein
	?	NC_002947	= 3701062	46 (0.920)					coding (430/1053 nt)	PP_3266	hypothetical protein
*	?	NC_002947	3709474 =	66 (1.250)	4 (0.080)	4/238	NT	7.3%	coding (923/1077 nt)	paaE	ring 1,2‑phenylacetyl‑CoA epoxidase reductase subunit
	?	NC_002947	3709526 =	40 (0.810)					coding (871/1077 nt)	paaE	ring 1,2‑phenylacetyl‑CoA epoxidase reductase subunit
*	?	NC_002947	3721856 =	51 (0.970)	5 (0.100)	5/240	NT	9.2%	coding (348/798 nt)	fnrC	Crp/Fnr family transcriptional regulator
	?	NC_002947	3721886 =	51 (1.020)					coding (318/798 nt)	fnrC	Crp/Fnr family transcriptional regulator
*	?	NC_002947	3732276 =	50 (0.950)	4 (0.080)	4/238	NT	8.2%	coding (965/1464 nt)	PP_3299	lipoprotein
	?	NC_002947	3732335 =	43 (0.870)					coding (906/1464 nt)	PP_3299	lipoprotein
*	?	NC_002947	= 3733332	66 (1.250)	4 (0.080)	4/248	NT	5.8%	coding (21/615 nt)	PP_3300	Transcriptional regulator, tetR family
	?	NC_002947	= 3733344	66 (1.280)					coding (33/615 nt)	PP_3300	Transcriptional regulator, tetR family
*	?	NC_002947	3746953 =	45 (0.850)	6 (0.120)	6/238	NT	14.4%	intergenic (+22/+62)	paoC/kefB‑II	aromatic aldehyde dehydrogenase molybdopterin‑binding subunit/glutathione‑regulated potassium/H+ antiporter
	?	NC_002947	3747009 =	29 (0.590)					intergenic (+78/+6)	paoC/kefB‑II	aromatic aldehyde dehydrogenase molybdopterin‑binding subunit/glutathione‑regulated potassium/H+ antiporter
*	?	NC_002947	= 3787557	46 (0.870)	6 (0.120)	5/242	NT	10.7%	coding (1078/1392 nt)	PP_3350	hypothetical protein
	?	NC_002947	3791290 =	56 (1.110)					coding (734/1026 nt)	PP_3353	sulfatase‑modifying protein
*	?	NC_002947	3790967 =	44 (0.830)	4 (0.080)	4/244	NT	7.7%	coding (411/1026 nt)	PP_3353	sulfatase‑modifying protein
	?	NC_002947	3791038 =	53 (1.040)					coding (482/1026 nt)	PP_3353	sulfatase‑modifying protein
*	?	NC_002947	3793596 =	50 (0.950)	7 (0.140)	5/242	NT	12.7%	coding (927/1191 nt)	PP_3355	beta‑ketothiolase
	?	NC_002947	3793629 =	49 (0.970)					coding (894/1191 nt)	PP_3355	beta‑ketothiolase
*	?	NC_002947	3796293 =	49 (0.930)	4 (0.080)	4/242	NT	7.6%	coding (161/1884 nt)	fcs	feruloyl‑CoA‑synthetase
	?	NC_002947	3796330 =	50 (0.990)					coding (124/1884 nt)	fcs	feruloyl‑CoA‑synthetase
*	?	NC_002947	3849545 =	60 (1.140)	3 (0.060)	3/242	NT	5.2%	coding (1310/2268 nt)	PP_3397	hypothetical protein
	?	NC_002947	3849579 =	53 (1.050)					coding (1344/2268 nt)	PP_3397	hypothetical protein
*	?	NC_002947	= 3853796	38 (0.720)	6 (0.120)	4/244	NT	13.4%	intergenic (+79/+3)	PP_3401/PP_3402	hypothetical protein/hypothetical protein
	?	NC_002947	= 3853818	41 (0.810)					coding (377/396 nt)	PP_3402	hypothetical protein
*	?	NC_002947	3860084 =	54 (1.020)	6 (0.120)	5/242	NT	10.4%	coding (99/243 nt)	PP_3411	hypothetical protein
	?	NC_002947	3860169 =	52 (1.030)					coding (184/243 nt)	PP_3411	hypothetical protein
*	?	NC_002947	= 3864155	46 (0.870)	4 (0.080)	4/242	NT	7.6%	coding (3078/3282 nt)	PP_3413	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 3864199	53 (1.050)					coding (3122/3282 nt)	PP_3413	two‑component system sensor histidine kinase/response regulator
*	?	NC_002947	3874587 =	45 (0.850)	4 (0.080)	4/238	NT	8.4%	coding (321/594 nt)	ltg	lytic transglycosylase
	?	NC_002947	3874627 =	45 (0.910)					coding (281/594 nt)	ltg	lytic transglycosylase
*	?	NC_002947	3952798 =	51 (0.970)	3 (0.060)	3/242	NT	5.2%	coding (1725/1977 nt)	PP_5606	YVTN beta‑propeller repeat‑containing protein
	?	NC_002947	3952837 =	61 (1.210)					coding (1686/1977 nt)	PP_5606	YVTN beta‑propeller repeat‑containing protein
*	?	NC_002947	= 3958559	44 (0.830)	3 (0.060)	3/240	NT	6.9%	coding (1826/5844 nt)	mnxG	manganese‑oxidizing multicopper oxidase
	?	NC_002947	= 3958588	39 (0.780)					coding (1797/5844 nt)	mnxG	manganese‑oxidizing multicopper oxidase
*	?	NC_002947	3998804 =	29 (0.550)	4 (0.080)	4/244	NT	12.0%	coding (241/684 nt)	PP_3527	TetR family transcriptional regulator
	?	NC_002947	3998849 =	31 (0.610)					coding (196/684 nt)	PP_3527	TetR family transcriptional regulator
*	?	NC_002947	4012710 =	37 (0.700)	3 (0.060)	3/240	NT	6.6%	coding (546/900 nt)	mvaB	hydroxymethylglutaryl‑CoA lyase
	?	NC_002947	4012765 =	50 (1.000)					coding (601/900 nt)	mvaB	hydroxymethylglutaryl‑CoA lyase
*	?	NC_002947	4033194 =	64 (1.210)	3 (0.060)	3/242	NT	5.1%	coding (832/1008 nt)	PP_3555	transmembrane sensor
	?	NC_002947	4033241 =	50 (0.990)					coding (879/1008 nt)	PP_3555	transmembrane sensor
*	?	NC_002947	4059604 =	71 (1.340)	3 (0.060)	3/238	NT	5.2%	coding (1295/1638 nt)	pgm	phosphoglucomutase
	?	NC_002947	4059694 =	42 (0.850)					coding (1205/1638 nt)	pgm	phosphoglucomutase
*	?	NC_002947	4071514 =	55 (1.040)	5 (0.100)	5/246	NT	8.5%	coding (645/3099 nt)	mdtB	multidrug transporter membrane protein
	?	NC_002947	4071559 =	54 (1.060)					coding (600/3099 nt)	mdtB	multidrug transporter membrane protein
*	?	NC_002947	= 4095364	44 (0.830)	5 (0.100)	5/240	NT	9.6%	coding (120/765 nt)	PP_3603	GntR family transcriptional regulator
	?	NC_002947	= 4095423	53 (1.060)					coding (61/765 nt)	PP_3603	GntR family transcriptional regulator
*	?	NC_002947	= 4116891	45 (0.850)	4 (0.080)	3/242	NT	8.4%	coding (36/456 nt)	iorA‑II	isoquinoline 1‑oxidoreductase subunit alpha
	?	NC_002947	= 4116933	44 (0.870)					coding (78/456 nt)	iorA‑II	isoquinoline 1‑oxidoreductase subunit alpha
*	?	NC_002947	4140591 =	44 (0.830)	4 (0.080)	4/234	NT	8.1%	coding (219/597 nt)	PP_5609	hypothetical protein
	?	NC_002947	4140641 =	50 (1.030)					coding (269/597 nt)	PP_5609	hypothetical protein
*	?	NC_002947	= 4142506	45 (0.850)	4 (0.080)	4/244	NT	8.0%	coding (639/1482 nt)	PP_3646	aldehyde dehydrogenase family protein
	?	NC_002947	= 4142532	49 (0.970)					coding (665/1482 nt)	PP_3646	aldehyde dehydrogenase family protein
*	?	NC_002947	4167362 =	61 (1.150)	4 (0.080)	4/240	NT	6.6%	coding (114/1212 nt)	creA	creatinase
	?	NC_002947	4167403 =	55 (1.100)					coding (73/1212 nt)	creA	creatinase
*	?	NC_002947	= 4172927	50 (0.950)	4 (0.080)	4/242	NT	7.6%	coding (561/825 nt)	PP_3671	aldo/keto reductase family oxidoreductase
	?	NC_002947	= 4172940	49 (0.970)					coding (574/825 nt)	PP_3671	aldo/keto reductase family oxidoreductase
*	?	NC_002947	4203699 =	67 (1.270)	4 (0.080)	3/248	NT	5.3%	coding (4077/6624 nt)	PP_3691	DNA helicase‑related protein
	?	NC_002947	4203773 =	77 (1.490)					coding (4003/6624 nt)	PP_3691	DNA helicase‑related protein
*	?	NC_002947	= 4210980	43 (0.810)	4 (0.080)	4/240	NT	8.8%	coding (97/285 nt)	PP_5621	hypothetical protein
	?	NC_002947	= 4210995	42 (0.840)					coding (82/285 nt)	PP_5621	hypothetical protein
*	?	NC_002947	= 4274606	49 (0.930)	4 (0.080)	4/242	NT	7.9%	coding (563/1500 nt)	glcD	glycolate oxidase FAD‑linked subunit
	?	NC_002947	= 4274653	46 (0.910)					coding (610/1500 nt)	glcD	glycolate oxidase FAD‑linked subunit
*	?	NC_002947	4279080 =	71 (1.340)	4 (0.080)	4/242	NT	5.6%	coding (280/1434 nt)	PP_3750	GntR family transcriptional regulator
	?	NC_002947	4279148 =	66 (1.310)					coding (348/1434 nt)	PP_3750	GntR family transcriptional regulator
*	?	NC_002947	= 4290319	30 (0.570)	3 (0.060)	3/248	NT	10.1%	coding (2268/3468 nt)	PP_3761	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 4290350	24 (0.470)					coding (2237/3468 nt)	PP_3761	two‑component system sensor histidine kinase/response regulator
*	?	NC_002947	= 4330864	69 (1.310)	5 (0.100)	5/240	NT	7.5%	coding (310/747 nt)	PP_3802	cation ABC transporter ATP‑binding protein
	?	NC_002947	= 4330915	59 (1.180)					coding (361/747 nt)	PP_3802	cation ABC transporter ATP‑binding protein
*	?	NC_002947	= 4352948	44 (0.830)	6 (0.120)	6/240	NT	12.3%	coding (74/1086 nt)	yrpB	2‑nitropropane dioxygenase
	?	NC_002947	= 4352964	44 (0.880)					coding (90/1086 nt)	yrpB	2‑nitropropane dioxygenase
*	?	NC_002947	4364240 =	60 (1.140)	4 (0.080)	4/246	NT	7.3%	intergenic (+17/‑260)	PP_3840/PP_5635	hypothetical protein/hypothetical protein
	?	NC_002947	4364278 =	44 (0.860)					intergenic (+55/‑222)	PP_3840/PP_5635	hypothetical protein/hypothetical protein
*	?	NC_002947	4377989 =	56 (1.060)	3 (0.060)	3/242	NT	5.7%	coding (188/531 nt)	PP_5638	hypothetical protein
	?	NC_002947	4378032 =	46 (0.910)					coding (145/531 nt)	PP_5638	hypothetical protein
*	?	NC_002947	= 4417777	59 (1.120)	4 (0.080)	4/242	NT	6.5%	coding (99/270 nt)	PP_3906	hypothetical protein
	?	NC_002947	= 4417807	58 (1.150)					coding (129/270 nt)	PP_3906	hypothetical protein
*	?	NC_002947	= 4447307	29 (0.550)	3 (0.060)	4/242	NT	8.4%	coding (258/1149 nt)	nicC	6‑hydroxynicotinate 3‑monooxygenase
	?	NC_002947	= 4447327	38 (0.760)					coding (238/1149 nt)	nicC	6‑hydroxynicotinate 3‑monooxygenase
*	?	NC_002947	= 4464579	56 (1.060)	4 (0.080)	3/242	NT	7.5%	coding (1376/1974 nt)	betT‑III	choline/carnitine/betaine transporter BetTC
	?	NC_002947	= 4464617	45 (0.890)					coding (1338/1974 nt)	betT‑III	choline/carnitine/betaine transporter BetTC
*	?	NC_002947	4502694 =	56 (1.060)	3 (0.060)	3/242	NT	5.2%	coding (323/1380 nt)	xanP	xanthine permease
	?	NC_002947	4502730 =	57 (1.130)					coding (359/1380 nt)	xanP	xanthine permease
*	?	NC_002947	= 4518349	61 (1.150)	5 (0.100)	5/246	NT	7.9%	coding (1171/2271 nt)	clpA	ATP‑dependent serine protease
	?	NC_002947	= 4518384	57 (1.110)					coding (1136/2271 nt)	clpA	ATP‑dependent serine protease
*	?	NC_002947	= 4555442	46 (0.870)	3 (0.060)	3/244	NT	6.7%	coding (1055/1506 nt)	zwfB	glucose 6‑phosphate 1‑dehydrogenase
	?	NC_002947	= 4555475	39 (0.770)					coding (1022/1506 nt)	zwfB	glucose 6‑phosphate 1‑dehydrogenase
*	?	NC_002947	= 4575531	25 (0.470)	4 (0.080)	4/234	NT	15.1%	intergenic (+49/‑73)	glgX/ybhP‑II	glycogen debranching enzyme/phosphohydrolase
	?	NC_002947	= 4575558	22 (0.450)					intergenic (+76/‑46)	glgX/ybhP‑II	glycogen debranching enzyme/phosphohydrolase
*	?	NC_002947	= 4583512	24 (0.450)	7 (0.140)	7/242	NT	23.0%	intergenic (‑85/+86)	treSB/glgE	bifunctional trehalose synthase B/maltokinase/alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase
	?	NC_002947	= 4583542	24 (0.480)					intergenic (‑115/+56)	treSB/glgE	bifunctional trehalose synthase B/maltokinase/alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase
*	?	NC_002947	= 4584077	59 (1.120)	6 (0.120)	4/244	NT	8.8%	coding (1507/1986 nt)	glgE	alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase
	?	NC_002947	= 4584103	68 (1.340)					coding (1481/1986 nt)	glgE	alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase
*	?	NC_002947	4586034 =	18 (0.340)	6 (0.140)	6/210	NT	33.5%	intergenic (+117/+98)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
	?	NC_002947	4586105 =	9 (0.210)					intergenic (+188/+27)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
*	?	NC_002947	4591353 =	52 (0.980)	3 (0.060)	3/244	NT	5.6%	coding (424/816 nt)	liuC	methylglutaconyl‑CoA hydratase
	?	NC_002947	4591395 =	51 (1.010)					coding (466/816 nt)	liuC	methylglutaconyl‑CoA hydratase
*	?	NC_002947	4591748 =	32 (0.610)	3 (0.060)	3/246	NT	8.8%	coding (7/1953 nt)	mccA	methylcrotonyl‑CoA carboxylase biotin‑containing subunit alpha
	?	NC_002947	4591788 =	31 (0.610)					coding (47/1953 nt)	mccA	methylcrotonyl‑CoA carboxylase biotin‑containing subunit alpha
*	?	NC_002947	= 4592540	27 (0.510)	3 (0.060)	3/240	NT	8.4%	coding (799/1953 nt)	mccA	methylcrotonyl‑CoA carboxylase biotin‑containing subunit alpha
	?	NC_002947	= 4592565	40 (0.800)					coding (824/1953 nt)	mccA	methylcrotonyl‑CoA carboxylase biotin‑containing subunit alpha
*	?	NC_002947	= 4613812	51 (0.970)	4 (0.080)	4/234	NT	9.0%	coding (183/4593 nt)	PP_4085	rhs family protein
	?	NC_002947	= 4613881	34 (0.700)					coding (252/4593 nt)	PP_4085	rhs family protein
*	?	NC_002947	4614448 =	55 (1.040)	4 (0.080)	4/244	NT	7.6%	coding (819/4593 nt)	PP_4085	rhs family protein
	?	NC_002947	4614479 =	45 (0.890)					coding (850/4593 nt)	PP_4085	rhs family protein
*	?	NC_002947	= 4620623	74 (1.400)	5 (0.090)	5/254	NT	6.4%	intergenic (+1892/‑368)	PP_5652/PP_5654	hypothetical protein/phosphotriesterase
	?	NC_002947	= 4620650	72 (1.360)					intergenic (+1919/‑341)	PP_5652/PP_5654	hypothetical protein/phosphotriesterase
*	?	NC_002947	4645725 =	43 (0.810)	4 (0.080)	4/238	NT	8.8%	coding (290/2112 nt)	fusB	elongation factor G 2
	?	NC_002947	4645762 =	43 (0.870)					coding (327/2112 nt)	fusB	elongation factor G 2
*	?	NC_002947	= 4682697	39 (0.740)	4 (0.080)	4/236	NT	8.8%	coding (987/1431 nt)	mltD	membrane‑bound lytic murein transglycosylase D
	?	NC_002947	= 4682724	47 (0.960)					coding (1014/1431 nt)	mltD	membrane‑bound lytic murein transglycosylase D
*	?	NC_002947	= 4683186	38 (0.720)	6 (0.140)	6/210	NT	14.7%	intergenic (+45/‑176)	mltD/PP_4146	membrane‑bound lytic murein transglycosylase D/peptide ABC transporter substrate‑binding protein
	?	NC_002947	= 4683234	38 (0.870)					intergenic (+93/‑128)	mltD/PP_4146	membrane‑bound lytic murein transglycosylase D/peptide ABC transporter substrate‑binding protein
*	?	NC_002947	= 4722314	49 (0.930)	4 (0.080)	4/242	NT	7.5%	coding (1250/1905 nt)	htpG	chaperone protein HtpG
	?	NC_002947	= 4722346	52 (1.030)					coding (1218/1905 nt)	htpG	chaperone protein HtpG
*	?	NC_002947	4734978 =	32 (0.610)	5 (0.100)	5/240	NT	12.5%	coding (657/2832 nt)	sucA	2‑oxoglutarate dehydrogenase subunit E1
	?	NC_002947	4735020 =	40 (0.800)					coding (615/2832 nt)	sucA	2‑oxoglutarate dehydrogenase subunit E1
*	?	NC_002947	= 4755135	60 (1.140)	4 (0.080)	3/236	NT	6.5%	coding (376/1965 nt)	pvdT	pyoverdine ABC transporter ATP‑binding protein/permease
	?	NC_002947	= 4755160	60 (1.220)					coding (401/1965 nt)	pvdT	pyoverdine ABC transporter ATP‑binding protein/permease
*	?	NC_002947	= 4766124	44 (0.830)	4 (0.080)	4/246	NT	8.1%	coding (777/2439 nt)	fpvA	TonB‑dependent outer membrane ferripyoverdine receptor FpvA
	?	NC_002947	= 4766159	48 (0.940)					coding (812/2439 nt)	fpvA	TonB‑dependent outer membrane ferripyoverdine receptor FpvA
*	?	NC_002947	4792651 =	69 (1.310)	4 (0.080)	3/242	NT	5.5%	coding (1189/6525 nt)	pvdI	non‑ribosomal peptide synthetase
	?	NC_002947	4792689 =	73 (1.450)					coding (1151/6525 nt)	pvdI	non‑ribosomal peptide synthetase
*	?	NC_002947	4797177 =	61 (1.150)	4 (0.080)	3/244	NT	6.2%	coding (806/1323 nt)	PP_4224	sensor histidine kinase
	?	NC_002947	4797220 =	62 (1.220)					coding (763/1323 nt)	PP_4224	sensor histidine kinase
*	?	NC_002947	4807792 =	65 (1.230)	4 (0.080)	4/244	NT	5.7%	coding (100/2832 nt)	PP_4234	bifunctional aldehyde oxidase/xanthine dehydrogenase
	?	NC_002947	4807833 =	70 (1.380)					coding (59/2832 nt)	PP_4234	bifunctional aldehyde oxidase/xanthine dehydrogenase
*	?	NC_002947	4808174 =	0 (0.000)	20 (0.520)	13/184	NT	47.1%	intergenic (‑283/‑272)	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
	?	NC_002947	= 5988935	45 (1.180)					intergenic (+229/‑317)	kefB‑III/PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
*	?	NC_002947	= 4808179	0 (0.000)	11 (0.230)	6/230	NT	34.9%	intergenic (‑288/‑267)	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
	?	NC_002947	5988765 =	41 (0.860)					intergenic (+59/‑487)	kefB‑III/PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
*	?	NC_002947	= 4876313	53 (1.000)	3 (0.060)	3/228	NT	5.7%	intergenic (+151/+286)	PP_4284/pucM	transporter/5‑hydroxyisourate hydrolase
	?	NC_002947	= 4876478	52 (1.100)					intergenic (+316/+121)	PP_4284/pucM	transporter/5‑hydroxyisourate hydrolase
*	?	NC_002947	4889569 =	39 (0.740)	3 (0.070)	3/200	NT	11.4%	intergenic (+15/‑138)	hyi/glxR	hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
	?	NC_002947	4889660 =	16 (0.390)					intergenic (+106/‑47)	hyi/glxR	hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
*	?	NC_002947	4896378 =	33 (0.620)	7 (0.160)	6/212	NT	23.1%	intergenic (+11/‑197)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
	?	NC_002947	4896467 =	19 (0.430)					intergenic (+100/‑108)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
*	?	NC_002947	= 4924679	50 (0.950)	3 (0.060)	3/236	NT	5.7%	coding (371/855 nt)	PP_4334	ParA family protein
	?	NC_002947	= 4924695	52 (1.060)					coding (355/855 nt)	PP_4334	ParA family protein
*	?	NC_002947	4925742 =	52 (0.980)	4 (0.080)	4/244	NT	7.0%	coding (284/858 nt)	PP_4335	flagellar motor protein
	?	NC_002947	4925811 =	57 (1.120)					coding (215/858 nt)	PP_4335	flagellar motor protein
*	?	NC_002947	4950757 =	57 (1.080)	6 (0.120)	4/248	NT	10.2%	coding (94/498 nt)	fliL	flagellar protein FliL
	?	NC_002947	4950789 =	50 (0.970)					coding (62/498 nt)	fliL	flagellar protein FliL
*	?	NC_002947	= 4957572	48 (0.910)	7 (0.150)	4/224	NT	14.1%	intergenic (‑55/+108)	fliH/fliG	flagellar assembly protein FliH/flagellar motor switch protein
	?	NC_002947	= 4957632	43 (0.920)					intergenic (‑115/+48)	fliH/fliG	flagellar assembly protein FliH/flagellar motor switch protein
*	?	NC_002947	4963771 =	26 (0.490)	3 (0.060)	3/240	NT	10.4%	intergenic (‑117/+111)	fleS/fleQ	two‑component system sensor histidine kinase FleS/transcriptional regulator FleQ
	?	NC_002947	4963837 =	27 (0.540)					intergenic (‑183/+45)	fleS/fleQ	two‑component system sensor histidine kinase FleS/transcriptional regulator FleQ
*	?	NC_002947	5012428 =	55 (1.040)	4 (0.080)	4/242	NT	7.0%	coding (211/219 nt)	PP_5677	hypothetical protein
	?	NC_002947	5012460 =	54 (1.070)					coding (179/219 nt)	PP_5677	hypothetical protein
*	?	NC_002947	5087790 =	39 (0.740)	4 (0.080)	4/242	NT	9.3%	coding (1020/1464 nt)	astD	N‑succinylglutamate 5‑semialdehyde dehydrogenase
	?	NC_002947	5087833 =	41 (0.810)					coding (977/1464 nt)	astD	N‑succinylglutamate 5‑semialdehyde dehydrogenase
*	?	NC_002947	= 5110754	65 (1.230)	4 (0.080)	4/244	NT	5.7%	intergenic (‑49/+590)	aroP‑II/rluB	aromatic amino acid transport protein/23S rRNA pseudouridylate synthase B
	?	NC_002947	= 5110781	69 (1.360)					intergenic (‑76/+563)	aroP‑II/rluB	aromatic amino acid transport protein/23S rRNA pseudouridylate synthase B
*	?	NC_002947	= 5120033	31 (0.590)	3 (0.060)	3/240	NT	8.8%	coding (223/558 nt)	PP_4506	nitroreductase family protein
	?	NC_002947	= 5120053	33 (0.660)					coding (203/558 nt)	PP_4506	nitroreductase family protein
*	?	NC_002947	5120858 =	67 (1.270)	4 (0.080)	3/250	NT	5.7%	coding (501/1455 nt)	trkH‑II	potassium transporter
	?	NC_002947	5120895 =	66 (1.270)					coding (538/1455 nt)	trkH‑II	potassium transporter
*	?	NC_002947	5129142 =	53 (1.000)	3 (0.060)	3/238	NT	6.0%	intergenic (‑38/+114)	PP_4515/recQ	MarR family transcriptional regulator/ATP‑dependent DNA 3'‑5' helicase
	?	NC_002947	5129184 =	44 (0.890)					intergenic (‑80/+72)	PP_4515/recQ	MarR family transcriptional regulator/ATP‑dependent DNA 3'‑5' helicase
*	?	NC_002947	= 5142249	55 (1.040)	6 (0.120)	5/242	NT	9.7%	coding (584/1173 nt)	PP_4526	MFS transporter
	?	NC_002947	= 5142277	59 (1.170)					coding (612/1173 nt)	PP_4526	MFS transporter
*	?	NC_002947	= 5175400	62 (1.170)	5 (0.100)	5/242	NT	8.3%	coding (203/945 nt)	PP_4551	alpha/beta family hydrolase
	?	NC_002947	= 5175430	52 (1.030)					coding (233/945 nt)	PP_4551	alpha/beta family hydrolase
*	?	NC_002947	5177969 =	41 (0.780)	6 (0.120)	5/244	NT	13.6%	coding (16/1221 nt)	PP_4553	ECF family RNA polymerase sigma‑70 factor
	?	NC_002947	5178009 =	37 (0.730)					coding (479/486 nt)	PP_4554	hypothetical protein
*	?	NC_002947	= 5178038	37 (0.700)	3 (0.060)	3/236	NT	7.2%	coding (450/486 nt)	PP_4554	hypothetical protein
	?	NC_002947	= 5178060	43 (0.880)					coding (428/486 nt)	PP_4554	hypothetical protein
*	?	NC_002947	5184749 =	40 (0.760)	4 (0.080)	4/246	NT	9.7%	coding (1711/1716 nt)	aceK	isocitrate dehydrogenase kinase/phosphatase
	?	NC_002947	5184813 =	36 (0.700)					coding (1647/1716 nt)	aceK	isocitrate dehydrogenase kinase/phosphatase
*	?	NC_002947	= 5184954	59 (1.120)	3 (0.060)	3/244	NT	5.3%	coding (1506/1716 nt)	aceK	isocitrate dehydrogenase kinase/phosphatase
	?	NC_002947	= 5184980	50 (0.990)					coding (1480/1716 nt)	aceK	isocitrate dehydrogenase kinase/phosphatase
*	?	NC_002947	= 5190346	58 (1.100)	6 (0.120)	6/234	NT	9.8%	intergenic (‑81/+93)	PP_4570/cysK	hypothetical protein/cysteine synthase A
	?	NC_002947	= 5190363	57 (1.170)					intergenic (‑98/+76)	PP_4570/cysK	hypothetical protein/cysteine synthase A
*	?	NC_002947	5196383 =	43 (0.810)	3 (0.060)	3/234	NT	6.1%	coding (132/690 nt)	ybgJ	allophanate hydrolase subunit 1
	?	NC_002947	5196428 =	53 (1.090)					coding (87/690 nt)	ybgJ	allophanate hydrolase subunit 1
*	?	NC_002947	= 5196392	46 (0.870)	4 (0.080)	5/234	NT	7.7%	coding (123/690 nt)	ybgJ	allophanate hydrolase subunit 1
	?	NC_002947	= 5196417	53 (1.090)					coding (98/690 nt)	ybgJ	allophanate hydrolase subunit 1
*	?	NC_002947	= 5200070	46 (0.870)	3 (0.060)	3/240	NT	6.0%	coding (150/522 nt)	PP_4580	hypothetical protein
	?	NC_002947	= 5200089	51 (1.020)					coding (131/522 nt)	PP_4580	hypothetical protein
*	?	NC_002947	= 5209562	55 (1.040)	4 (0.080)	4/240	NT	6.6%	coding (573/1134 nt)	rnd	ribonuclease D
	?	NC_002947	= 5209580	62 (1.240)					coding (555/1134 nt)	rnd	ribonuclease D
*	?	NC_002947	= 5211690	44 (0.830)	3 (0.060)	3/238	NT	6.3%	coding (260/1638 nt)	PP_4592	metal dependent hydrolase
	?	NC_002947	= 5211711	48 (0.970)					coding (239/1638 nt)	PP_4592	metal dependent hydrolase
*	?	NC_002947	= 5237782	36 (0.680)	4 (0.080)	4/242	NT	9.7%	coding (242/387 nt)	PP_4614	hypothetical protein
	?	NC_002947	= 5237829	40 (0.800)					coding (289/387 nt)	PP_4614	hypothetical protein
*	?	NC_002947	5244966 =	42 (0.800)	4 (0.080)	4/246	NT	8.7%	coding (373/834 nt)	hmgR	Hmg transcriptional repressor
	?	NC_002947	5245022 =	43 (0.840)					coding (429/834 nt)	hmgR	Hmg transcriptional repressor
*	?	NC_002947	5272705 =	57 (1.080)	5 (0.100)	5/242	NT	9.2%	coding (656/708 nt)	PP_4647	transcriptional regulator, LuxR family
	?	NC_002947	5272751 =	45 (0.890)					coding (702/708 nt)	PP_4647	transcriptional regulator, LuxR family
*	?	NC_002947	= 5273125	62 (1.170)	4 (0.080)	4/244	NT	6.4%	coding (272/1125 nt)	rlmG	ribosomal RNA large subunit methyltransferase G
	?	NC_002947	= 5273170	57 (1.120)					coding (317/1125 nt)	rlmG	ribosomal RNA large subunit methyltransferase G
*	?	NC_002947	= 5288423	17 (0.320)	3 (0.070)	3/194	NT	17.2%	intergenic (‑104/+80)	PP_4660/mdaB	LysR family transcriptional regulator/drug activity modulator B
	?	NC_002947	= 5288457	16 (0.400)					intergenic (‑138/+46)	PP_4660/mdaB	LysR family transcriptional regulator/drug activity modulator B
*	?	NC_002947	5290472 =	71 (1.340)	4 (0.080)	4/242	NT	5.3%	coding (70/882 nt)	PP_4664	LysR family transcriptional regulator
	?	NC_002947	5290501 =	74 (1.470)					coding (99/882 nt)	PP_4664	LysR family transcriptional regulator
*	?	NC_002947	5299051 =	48 (0.910)	3 (0.060)	3/244	NT	5.9%	coding (1051/2076 nt)	recD	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease
	?	NC_002947	5299093 =	49 (0.970)					coding (1009/2076 nt)	recD	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease
*	?	NC_002947	5300943 =	62 (1.170)	3 (0.060)	3/238	NT	5.0%	coding (2830/3675 nt)	recB	Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease
	?	NC_002947	5300972 =	55 (1.110)					coding (2801/3675 nt)	recB	Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease
*	?	NC_002947	= 5305168	59 (1.120)	4 (0.080)	4/236	NT	6.4%	coding (2084/3483 nt)	recC	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit
	?	NC_002947	= 5305201	63 (1.280)					coding (2051/3483 nt)	recC	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit
*	?	NC_002947	5315699 =	41 (0.780)	4 (0.080)	4/244	NT	9.3%	coding (234/852 nt)	PP_4677	CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
	?	NC_002947	5315752 =	39 (0.770)					coding (181/852 nt)	PP_4677	CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
*	?	NC_002947	5319136 =	64 (1.210)	4 (0.080)	4/238	NT	6.8%	coding (238/1725 nt)	ilvI	acetohydroxybutanoate synthase/acetolactate synthase
	?	NC_002947	5319189 =	50 (1.010)					coding (185/1725 nt)	ilvI	acetohydroxybutanoate synthase/acetolactate synthase
*	?	NC_002947	5329487 =	66 (1.250)	4 (0.080)	3/242	NT	6.5%	coding (120/345 nt)	PP_4690	Rieske 2Fe‑2S family protein
	?	NC_002947	5329522 =	53 (1.050)					coding (155/345 nt)	PP_4690	Rieske 2Fe‑2S family protein
*	?	NC_002947	= 5339763	52 (0.980)	4 (0.080)	4/246	NT	6.9%	coding (991/1383 nt)	pcnB	poly(A) polymerase
	?	NC_002947	= 5339803	57 (1.110)					coding (1031/1383 nt)	pcnB	poly(A) polymerase
*	?	NC_002947	5341916 =	54 (1.020)	4 (0.080)	4/240	NT	6.9%	coding (226/864 nt)	panC	pantothenate synthetase
	?	NC_002947	5341952 =	57 (1.140)					coding (262/864 nt)	panC	pantothenate synthetase
*	?	NC_002947	5348924 =	56 (1.060)	4 (0.080)	4/240	NT	7.9%	coding (1398/2937 nt)	PP_4704	hypothetical protein
	?	NC_002947	5348979 =	40 (0.800)					coding (1453/2937 nt)	PP_4704	hypothetical protein
*	?	NC_002947	5374108 =	52 (0.980)	3 (0.060)	3/240	NT	5.7%	coding (192/804 nt)	dapB	4‑hydroxy‑tetrahydrodipicolinate reductase
	?	NC_002947	5374150 =	50 (1.000)					coding (150/804 nt)	dapB	4‑hydroxy‑tetrahydrodipicolinate reductase
*	?	NC_002947	5374504 =	53 (1.000)	4 (0.080)	3/244	NT	8.3%	coding (937/1128 nt)	dnaJ	chaperone protein DnaJ
	?	NC_002947	5374545 =	38 (0.750)					coding (896/1128 nt)	dnaJ	chaperone protein DnaJ
*	?	NC_002947	5413023 =	44 (0.830)	5 (0.100)	5/238	NT	12.3%	coding (1147/2394 nt)	PP_4755	ferrichrome‑iron receptor
	?	NC_002947	5413089 =	30 (0.610)					coding (1081/2394 nt)	PP_4755	ferrichrome‑iron receptor
*	?	NC_002947	= 5415057	49 (0.930)	4 (0.080)	4/240	NT	8.4%	coding (720/1392 nt)	gabP‑V	gamma‑aminobutyrate permease
	?	NC_002947	= 5415119	41 (0.820)					coding (658/1392 nt)	gabP‑V	gamma‑aminobutyrate permease
*	?	NC_002947	5417913 =	57 (1.080)	5 (0.100)	5/242	NT	9.6%	coding (1158/1368 nt)	PP_4758	MFS transporter
	?	NC_002947	5417958 =	40 (0.800)					coding (1113/1368 nt)	PP_4758	MFS transporter
*	?	NC_002947	5425659 =	54 (1.020)	3 (0.060)	3/238	NT	5.9%	coding (195/1239 nt)	PP_4765	hypothetical protein
	?	NC_002947	5425688 =	45 (0.910)					coding (224/1239 nt)	PP_4765	hypothetical protein
*	?	NC_002947	= 5429661	48 (0.910)	3 (0.060)	3/240	NT	5.6%	coding (169/612 nt)	PP_4768	exonuclease
	?	NC_002947	= 5429683	55 (1.100)					coding (147/612 nt)	PP_4768	exonuclease
*	?	NC_002947	= 5441495	68 (1.290)	7 (0.140)	5/238	NT	9.9%	coding (1089/1653 nt)	PP_4780	acyl‑CoA dehydrogenase
	?	NC_002947	= 5441532	64 (1.290)					coding (1052/1653 nt)	PP_4780	acyl‑CoA dehydrogenase
*	?	NC_002947	5443506 =	69 (1.310)	4 (0.080)	4/234	NT	6.0%	coding (1274/1989 nt)	PP_4781	sensor histidine kinase
	?	NC_002947	5443547 =	61 (1.250)					coding (1233/1989 nt)	PP_4781	sensor histidine kinase
*	?	NC_002947	5444212 =	38 (0.720)	3 (0.060)	3/248	NT	7.2%	coding (568/1989 nt)	PP_4781	sensor histidine kinase
	?	NC_002947	5444250 =	40 (0.780)					coding (530/1989 nt)	PP_4781	sensor histidine kinase
*	?	NC_002947	5446532 =	48 (0.910)	4 (0.080)	3/246	NT	7.2%	coding (37/1284 nt)	hemL	glutamate‑1‑semialdehyde 2,1‑aminomutase
	?	NC_002947	5446572 =	56 (1.090)					coding (77/1284 nt)	hemL	glutamate‑1‑semialdehyde 2,1‑aminomutase
*	?	NC_002947	= 5456898	42 (0.800)	4 (0.080)	4/246	NT	9.6%	coding (630/2607 nt)	leuS	leucine‑‑tRNA ligase
	?	NC_002947	= 5456990	35 (0.680)					coding (722/2607 nt)	leuS	leucine‑‑tRNA ligase
*	?	NC_002947	5501667 =	49 (0.930)	3 (0.060)	3/246	NT	5.6%	coding (60/390 nt)	PP_4835	hypothetical protein
	?	NC_002947	5501707 =	53 (1.040)					coding (100/390 nt)	PP_4835	hypothetical protein
*	?	NC_002947	= 5510365	43 (0.810)	3 (0.060)	3/238	NT	6.1%	coding (564/1488 nt)	urtB	urea ABC transporter permease
	?	NC_002947	= 5510401	52 (1.050)					coding (600/1488 nt)	urtB	urea ABC transporter permease
*	?	NC_002947	= 5533581	56 (1.060)	4 (0.080)	3/234	NT	7.2%	coding (894/1137 nt)	PP_4867	BraC‑like branched‑chain amino acid ABC transporter substrate‑binding protein
	?	NC_002947	= 5533633	51 (1.050)					coding (842/1137 nt)	PP_4867	BraC‑like branched‑chain amino acid ABC transporter substrate‑binding protein
*	?	NC_002947	5534166 =	46 (0.870)	4 (0.080)	3/242	NT	7.2%	coding (309/1137 nt)	PP_4867	BraC‑like branched‑chain amino acid ABC transporter substrate‑binding protein
	?	NC_002947	5534223 =	59 (1.170)					coding (252/1137 nt)	PP_4867	BraC‑like branched‑chain amino acid ABC transporter substrate‑binding protein
*	?	NC_002947	= 5567397	39 (0.740)	4 (0.080)	4/242	NT	9.1%	coding (89/1899 nt)	mutL	DNA mismatch repair protein MutL
	?	NC_002947	= 5567439	43 (0.850)					coding (47/1899 nt)	mutL	DNA mismatch repair protein MutL
*	?	NC_002947	5608540 =	51 (0.970)	4 (0.080)	4/242	NT	8.2%	coding (1058/1272 nt)	waaA	3‑deoxy‑D‑manno‑octulosonic acid transferase
	?	NC_002947	5608576 =	41 (0.810)					coding (1022/1272 nt)	waaA	3‑deoxy‑D‑manno‑octulosonic acid transferase
*	?	NC_002947	5630781 =	49 (0.930)	5 (0.100)	4/244	NT	9.5%	coding (311/3954 nt)	putA	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
	?	NC_002947	5630838 =	48 (0.950)					coding (368/3954 nt)	putA	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
*	?	NC_002947	= 5635894	50 (0.950)	4 (0.080)	4/238	NT	7.4%	coding (262/1803 nt)	PP_4948	acyl‑CoA dehydrogenase family protein
	?	NC_002947	= 5635919	53 (1.070)					coding (287/1803 nt)	PP_4948	acyl‑CoA dehydrogenase family protein
*	?	NC_002947	5638366 =	50 (0.950)	3 (0.060)	3/240	NT	6.2%	coding (900/1443 nt)	PP_4949	TldD/PmbA family peptidase
	?	NC_002947	5638409 =	44 (0.880)					coding (943/1443 nt)	PP_4949	TldD/PmbA family peptidase
*	?	NC_002947	5654720 =	47 (0.890)	4 (0.080)	3/246	NT	7.1%	coding (826/1059 nt)	epd	D‑erythrose 4‑phosphate dehydrogenase
	?	NC_002947	5654765 =	59 (1.150)					coding (781/1059 nt)	epd	D‑erythrose 4‑phosphate dehydrogenase
*	?	NC_002947	= 5655848	78 (1.480)	4 (0.080)	4/238	NT	5.3%	coding (1847/1998 nt)	tktA	transketolase A
	?	NC_002947	= 5655877	69 (1.390)					coding (1818/1998 nt)	tktA	transketolase A
*	?	NC_002947	= 5661040	43 (0.810)	4 (0.080)	4/234	NT	8.5%	coding (665/1701 nt)	ligB	DNA ligase B
	?	NC_002947	= 5661069	46 (0.950)					coding (694/1701 nt)	ligB	DNA ligase B
*	?	NC_002947	= 5673612	52 (0.980)	4 (0.080)	4/246	NT	7.6%	coding (855/1881 nt)	rhlE‑II	ATP‑dependent RNA helicase
	?	NC_002947	= 5673663	47 (0.920)					coding (906/1881 nt)	rhlE‑II	ATP‑dependent RNA helicase
*	?	NC_002947	5676306 =	52 (0.980)	6 (0.120)	4/238	NT	11.0%	coding (1699/1860 nt)	PP_4983	amine oxidase
	?	NC_002947	5676346 =	48 (0.970)					coding (1659/1860 nt)	PP_4983	amine oxidase
*	?	NC_002947	= 5684994	73 (1.380)	4 (0.080)	4/236	NT	5.8%	coding (1899/4941 nt)	PP_4988	signal transduction histidine kinase CheA/CheY‑like receiver
	?	NC_002947	= 5685031	63 (1.280)					coding (1862/4941 nt)	PP_4988	signal transduction histidine kinase CheA/CheY‑like receiver
*	?	NC_002947	5690244 =	50 (0.950)	6 (0.120)	5/240	NT	10.4%	coding (99/402 nt)	pilG	pilus biosynthesis/twitching motility protein PilG
	?	NC_002947	5690320 =	56 (1.120)					coding (23/402 nt)	pilG	pilus biosynthesis/twitching motility protein PilG
*	?	NC_002947	5698727 =	39 (0.740)	5 (0.110)	5/220	NT	14.1%	intergenic (+17/‑150)	hslU/PP_5002	protease HslVU ATPase subunit/hypothetical protein
	?	NC_002947	5698810 =	27 (0.590)					intergenic (+100/‑67)	hslU/PP_5002	protease HslVU ATPase subunit/hypothetical protein
*	?	NC_002947	= 5770663	36 (0.680)	4 (0.080)	4/238	NT	11.0%	coding (209/4716 nt)	PP_5060	hypothetical protein
	?	NC_002947	= 5770682	31 (0.630)					coding (190/4716 nt)	PP_5060	hypothetical protein
*	?	NC_002947	= 5786495	42 (0.800)	4 (0.090)	4/206	NT	9.5%	intergenic (+38/‑93)	PP_5068/trxC	hypothetical protein/thioredoxin
	?	NC_002947	= 5786532	42 (0.980)					intergenic (+75/‑56)	PP_5068/trxC	hypothetical protein/thioredoxin
*	?	NC_002947	5792613 =	50 (0.950)	4 (0.080)	3/236	NT	7.5%	coding (718/1419 nt)	gltD	glutamate synthase subunit beta
	?	NC_002947	5792679 =	52 (1.060)					coding (652/1419 nt)	gltD	glutamate synthase subunit beta
*	?	NC_002947	5844930 =	54 (1.020)	3 (0.060)	3/240	NT	5.9%	coding (1552/1599 nt)	PP_5122	GMC family oxidoreductase
	?	NC_002947	5844965 =	45 (0.900)					coding (1587/1599 nt)	PP_5122	GMC family oxidoreductase
*	?	NC_002947	5878215 =	52 (0.980)	6 (0.120)	6/236	NT	10.9%	coding (782/921 nt)	PP_5152	hypothetical protein
	?	NC_002947	5878279 =	50 (1.020)					coding (718/921 nt)	PP_5152	hypothetical protein
*	?	NC_002947	5914157 =	28 (0.530)	4 (0.100)	4/198	NT	17.9%	intergenic (+49/+104)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
	?	NC_002947	5914253 =	15 (0.370)					intergenic (+145/+8)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
*	?	NC_002947	= 5914184	25 (0.470)	6 (0.150)	5/198	NT	25.8%	intergenic (+76/+77)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
	?	NC_002947	= 5914224	15 (0.370)					intergenic (+116/+37)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
*	?	NC_002947	5926012 =	41 (0.780)	4 (0.080)	4/246	NT	8.6%	coding (133/1083 nt)	gcvT‑II	aminomethyltransferase
	?	NC_002947	5926051 =	45 (0.880)					coding (94/1083 nt)	gcvT‑II	aminomethyltransferase
*	?	NC_002947	= 5927638	60 (1.140)	4 (0.080)	4/242	NT	6.5%	coding (257/1623 nt)	PP_5195	iron ABC transporter permease
	?	NC_002947	= 5927662	57 (1.130)					coding (233/1623 nt)	PP_5195	iron ABC transporter permease
*	?	NC_002947	= 5936201	55 (1.040)	3 (0.060)	3/242	NT	5.3%	coding (263/450 nt)	PP_5205	hypothetical protein
	?	NC_002947	= 5936232	54 (1.070)					coding (294/450 nt)	PP_5205	hypothetical protein
*	?	NC_002947	5937758 =	73 (1.380)	4 (0.080)	4/240	NT	6.0%	coding (319/2721 nt)	rbbA	ribosome‑associated ATPase
	?	NC_002947	5937872 =	57 (1.140)					coding (433/2721 nt)	rbbA	ribosome‑associated ATPase
*	?	NC_002947	5940728 =	48 (0.910)	4 (0.080)	4/248	NT	7.2%	coding (567/1113 nt)	yhhJ	translation‑like protein
	?	NC_002947	5940769 =	57 (1.110)					coding (608/1113 nt)	yhhJ	translation‑like protein
*	?	NC_002947	5947087 =	41 (0.780)	4 (0.080)	4/232	NT	9.6%	intergenic (‑79/+127)	ubiD/rho	3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase/transcription termination factor Rho
	?	NC_002947	5947192 =	38 (0.790)					intergenic (‑184/+22)	ubiD/rho	3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase/transcription termination factor Rho
*	?	NC_002947	= 5958224	53 (1.000)	3 (0.060)	3/236	NT	6.4%	coding (1628/2856 nt)	cyaA	adenylate cyclase
	?	NC_002947	= 5958279	39 (0.800)					coding (1683/2856 nt)	cyaA	adenylate cyclase
*	?	NC_002947	5964109 =	43 (0.810)	3 (0.060)	3/240	NT	7.8%	coding (199/900 nt)	xerC	tyrosine recombinase XerC
	?	NC_002947	5964147 =	30 (0.600)					coding (237/900 nt)	xerC	tyrosine recombinase XerC
*	?	NC_002947	= 5965485	49 (0.930)	3 (0.060)	3/244	NT	6.3%	coding (679/696 nt)	had	(S)‑2‑haloacid dehalogenase
	?	NC_002947	= 5965530	42 (0.830)					intergenic (+28/+72)	had/PP_5232	(S)‑2‑haloacid dehalogenase/hypothetical protein
*	?	NC_002947	6000903 =	40 (0.760)	4 (0.100)	4/194	NT	17.2%	intergenic (+10/+99)	PP_5256/amaA	cyclic nucleotide‑binding protein/L‑pipecolate oxidase
	?	NC_002947	6000997 =	8 (0.200)					intergenic (+104/+5)	PP_5256/amaA	cyclic nucleotide‑binding protein/L‑pipecolate oxidase
*	?	NC_002947	= 6003790	65 (1.230)	4 (0.080)	4/248	NT	6.2%	coding (147/1491 nt)	amaB	L‑piperidine‑6‑carboxylate dehydrogenase
	?	NC_002947	= 6003845	58 (1.120)					coding (92/1491 nt)	amaB	L‑piperidine‑6‑carboxylate dehydrogenase
*	?	NC_002947	6007918 =	45 (0.850)	3 (0.060)	3/248	NT	6.5%	coding (204/1389 nt)	norM	multidrug resistance protein NorM
	?	NC_002947	6007956 =	43 (0.830)					coding (242/1389 nt)	norM	multidrug resistance protein NorM
*	?	NC_002947	6008533 =	46 (0.870)	4 (0.080)	4/242	NT	8.4%	coding (819/1389 nt)	norM	multidrug resistance protein NorM
	?	NC_002947	6008577 =	43 (0.850)					coding (863/1389 nt)	norM	multidrug resistance protein NorM
*	?	NC_002947	= 6027717	37 (0.700)	3 (0.060)	3/244	NT	8.2%	coding (140/1140 nt)	PP_5277	MFS transporter
	?	NC_002947	= 6027744	32 (0.630)					coding (113/1140 nt)	PP_5277	MFS transporter
*	?	NC_002947	6045929 =	44 (0.830)	3 (0.060)	3/244	NT	6.1%	coding (182/768 nt)	PP_5298	glutamine amidotransferase
	?	NC_002947	6045977 =	50 (0.990)					coding (134/768 nt)	PP_5298	glutamine amidotransferase
*	?	NC_002947	6055409 =	48 (0.910)	4 (0.080)	4/238	NT	9.1%	coding (362/732 nt)	tonB	TonB energy transducing system subunit TonB
	?	NC_002947	6055475 =	35 (0.710)					coding (428/732 nt)	tonB	TonB energy transducing system subunit TonB
*	?	NC_002947	= 6056126	39 (0.740)	3 (0.060)	3/244	NT	7.3%	coding (253/927 nt)	oxyR	oxidative and nitrosative stress transcriptional dual regulator
	?	NC_002947	= 6056175	39 (0.770)					coding (302/927 nt)	oxyR	oxidative and nitrosative stress transcriptional dual regulator
*	?	NC_002947	= 6063436	65 (1.230)	4 (0.080)	4/242	NT	6.4%	coding (325/558 nt)	ubiC	chorismate pyruvate‑lyase
	?	NC_002947	= 6063485	56 (1.110)					coding (374/558 nt)	ubiC	chorismate pyruvate‑lyase
*	?	NC_002947	= 6080834	46 (0.870)	4 (0.080)	4/246	NT	8.5%	coding (778/897 nt)	PP_5332	hypothetical protein
	?	NC_002947	= 6080867	42 (0.820)					coding (811/897 nt)	PP_5332	hypothetical protein
*	?	NC_002947	6088872 =	51 (0.970)	4 (0.080)	4/242	NT	8.3%	coding (51/1104 nt)	potF‑IV	putrescine‑binding protein
	?	NC_002947	6088914 =	40 (0.800)					coding (93/1104 nt)	potF‑IV	putrescine‑binding protein
*	?	NC_002947	6113440 =	56 (1.060)	4 (0.080)	4/242	NT	6.8%	coding (570/1446 nt)	clsA	cardiolipin synthase
	?	NC_002947	6113474 =	57 (1.130)					coding (604/1446 nt)	clsA	cardiolipin synthase
*	?	NC_002947	6116735 =	36 (0.680)	5 (0.100)	5/242	NT	12.2%	coding (944/1401 nt)	lpd	dihydrolipoyl dehydrogenase
	?	NC_002947	6116768 =	38 (0.760)					coding (977/1401 nt)	lpd	dihydrolipoyl dehydrogenase
*	?	NC_002947	= 6118616	55 (1.040)	4 (0.080)	4/240	NT	7.0%	coding (412/1158 nt)	PP_5368	MFS transporter
	?	NC_002947	= 6118672	54 (1.080)					coding (356/1158 nt)	PP_5368	MFS transporter
*	?	NC_002947	6163316 =	63 (1.190)	3 (0.060)	3/244	NT	5.1%	coding (1967/2013 nt)	PP_5405	transposase
	?	NC_002947	6163346 =	52 (1.030)					coding (1937/2013 nt)	PP_5405	transposase
*	?	NC_002947	= 6169468	36 (0.680)	7 (0.140)	7/242	NT	16.8%	coding (827/1182 nt)	PP_5408	hypothetical protein
	?	NC_002947	= 6169478	35 (0.700)					coding (817/1182 nt)	PP_5408	hypothetical protein