Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
16 2 3
17 2 3
18 2 3
19 2 3
20 2 3
21 2 3
7 13 19

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 76 121
Multiple Base Substitutions 0 0
Deletions 7 7
Insertions 2 2
Mobile Element Insertions 1 19
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 86 149

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I0 R1 58 0 118.0 4096992 98.1% 4019149 136.7
A16 F32 I1 R1 3 0 103.6 3577348 97.8% 3498646 137.8
A16 F61 I0 R1 266 0 38.6 1452742 95.7% 1390274 135.7
A16 F61 I1 R1 3 0 160.2 5625880 98.5% 5541491 134.7
A17 F33 I1 R1 3 0 72.4 2775030 92.7% 2572452 133.6
A17 F62 I0 R1 172 0 33.3 1236604 95.8% 1184666 135.5
A17 F62 I1 R1 5 0 80.8 2823842 98.9% 2792779 134.8
A18 F32 I1 R1 3 0 80.2 2999988 94.3% 2828988 133.4
A18 F61 I0 R1 181 0 23.5 866004 95.3% 825301 135.1
A18 F61 I1 R1 4 0 98.8 3448850 98.8% 3407463 135.0
A19 F34 I1 R1 4 0 79.5 3002906 92.2% 2768679 135.0
A19 F63 I0 R1 54 0 438.9 15372486 98.2% 15095781 135.9
A19 F63 I1 R1 4 0 92.3 3235132 98.6% 3189840 134.9
A20 F31 I1 R1 3 0 92.6 3447558 92.7% 3195886 135.5
A20 F61 I0 R1 60 0 488.0 17229608 98.5% 16971163 134.9
A20 F61 I1 R1 5 0 119.3 4194200 98.6% 4135481 134.5
A21 F32 I1 R1 3 0 100.9 3794114 93.0% 3528526 133.3
A21 F61 I0 R1 366 0 45.9 1806644 94.4% 1705471 134.9
A21 F61 I1 R1 3 0 126.3 4422766 98.7% 4365270 135.0

Mutation Needle Plot

Mutation Targets

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