| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,335,153 | Δ593 bp | [ymiA]–yciX | [ymiA], yciX | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1335153 | 1335745 | 593 | 22 [0] | [2] 26 | [ymiA]–yciX | [ymiA],yciX |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1335152 | 0 (0.000) | 22 (0.590) | 20/236 | 1.0 | 95.7% | coding (29/165 nt) | ymiA | uncharacterized protein |
| ? | NC_000913 | 1335746 = | 2 (0.050) | intergenic (+288/‑85) | yciX/acnA | uncharacterized protein/aconitate hydratase 1; aconitase A | |||||
AAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGGTTAGCAATGCCTTCTGGAAATCAGGAACCCCGCCGCGATCCTGAATTAAAACGTAAAGCCTGGCTGGCGGTTTTTCTTGGTTCTGCACTTTTCTGGGTGGTTGTCGCACT > NC_000913/1335013‑1335263 | aaaaGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgtta > 5:15855‑M1/1‑140 (MQ=255) aCTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttac > 3:176696‑M1/1‑123 (MQ=255) aCTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttac < 4:176696‑M1/133‑11 (MQ=255) gCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaa > 6:137313‑M1/1‑101 (MQ=255) cTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcg > 7:116474‑M1/1‑88 (MQ=255) ggttctTTAGGATTTGTCTCATCGTATGATTAATTACACAAATCGTTCAACGTCTTGCTGATAAGTGATTGCGATTATATGAGaaatcgttacgcgatgtttgtgatatctttaatattcaccctgaagagaatcagatcttcgcaacc > 7:38841‑M1/3‑83 (MQ=255) tAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtca < 6:15855‑M1/148‑73 (MQ=255) gATTTGTGTCATCGTATGATTAATTACTCCAATCGTTCAACGTGTTTCTGATATGTGATGGCGATTATATGAGtaatcgttacgctatgtttgtgttatctttaatattcaccctgaagagaatctgggcttcgcaacgctgtcattaa < 8:38841‑M1/149‑77 (MQ=255) gATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatc < 5:162828‑M1/125‑53 (MQ=255) gATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatc > 6:162828‑M1/1‑73 (MQ=255) tctcATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaa > 8:19807‑M1/1‑67 (MQ=255) tctcATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaa < 7:19807‑M1/143‑77 (MQ=255) aTCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagct < 8:116474‑M1/148‑86 (MQ=255) attaattaCACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtc < 2:86083‑M1/148‑94 (MQ=255) attaattaCACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtc > 1:86083‑M1/1‑55 (MQ=255) ttCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccag < 5:137313‑M1/149‑112 (MQ=255) tGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaag < 7:27876‑M1/125‑108 (MQ=255) tGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaag > 8:27876‑M1/1‑18 (MQ=255) ggCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaa < 6:69361‑M1/109‑96 (MQ=255) ggCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaa > 5:69361‑M1/1‑14 (MQ=255) gagaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggagga > 7:115822‑M1/1‑3 (MQ=255) gagaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggagga < 8:115822‑M1/85‑83 (MQ=255) | AAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGGTTAGCAATGCCTTCTGGAAATCAGGAACCCCGCCGCGATCCTGAATTAAAACGTAAAGCCTGGCTGGCGGTTTTTCTTGGTTCTGCACTTTTCTGGGTGGTTGTCGCACT > NC_000913/1335013‑1335263 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |