Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	1,335,035	Δ726 bp		ymiA–yciX	ymiA, yciX

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1335035	1335760	726	74 [0]	[0] 74	ymiA–yciX	ymiA,yciX

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1335034	0 (0.000)	74 (0.770)	64/282	0.5	100%	intergenic (+205/‑90)	cysB/ymiA	N‑acetylserine‑responsive cysteine regulon transcriptional activator; autorepressor/uncharacterized protein
	?	NC_000913	1335761 =	0 (0.000)					intergenic (+303/‑70)	yciX/acnA	uncharacterized protein/aconitate hydratase 1; aconitase A

TCTCTGTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCT  >  NC_000913/1335617‑1335904                                                                                                                                                 |                                                                                                                                                ttacttatttctataccgtgcacaatatttttatccctcatatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcgaatatctatttcaggtcaaaagattgaattattcactggGTTtg                                                                                                                                             >  1:290951‑M2/145‑149 (MQ=255)   acttatttgtataccgaggacaatatttttatccctcatttttatagtttaaattacctgtaaagtagtgtcttatttcccgcctcgcaaagtccagttttcaaatatctatttcaggtcaaaagattgaatttttcactggGTTtgt                                                                                                                                            <  8:281770‑M2/6‑1 (MQ=255)   acttatttctataccgtgcacaatatttttatccctcatatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTtgtg                                                                                                                                           >  6:140057‑M2/143‑149 (MQ=255)    cttatttctataccgtgcacaatatttttatccctcatatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTtgtg                                                                                                                                           <  5:173388‑M2/7‑1 (MQ=255)        tttctataccgtgcacaatatttttatccctcatatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTAt                                                                                                                                       <  1:374205‑M2/11‑1 (MQ=255)         ttctataccgtgcacaatatttttatccctcatatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCt                                                                                                                                     >  7:318145‑M2/137‑149 (MQ=255)              taccgtgcacaatatttttatccctcatatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTaa                                                                                                                                 <  2:394971‑M2/17‑1 (MQ=255)              taccgtgcacaatatttttatccctcatatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTaa                                                                                                                                 >  5:399589‑M2/132‑148 (MQ=255)                 cgtgcacaatatttttatccctcatatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATAtt                                                                                                                             >  6:231623‑M2/129‑149 (MQ=255)                   tgcacaatatttttatccctcatatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCa                                                                                                                           <  4:129478‑M2/23‑1 (MQ=255)                   tgcacaatatttttatccctcatatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCa                                                                                                                           <  2:327593‑M2/23‑1 (MQ=255)                        aatatttttatccctcatatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGt                                                                                                                                                >  3:189417‑M2/122‑123 (MQ=255)                        aatatttttatccctcatatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGt                                                                                                                                                <  4:189417‑M2/2‑1 (MQ=255)                         atatttttatccctcatatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTg                                                                                                                      >  1:254180‑M2/121‑148 (MQ=255)                            tttttatccctcatatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAaga                                                                                                                  <  1:186178‑M2/32‑1 (MQ=255)                            tttttatccctcatatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAaga                                                                                                                  <  2:134309‑M2/32‑1 (MQ=255)                              tttatccctcatatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAagag                                                                                                                 <  6:39717‑M2/33‑1 (MQ=255)                                    cctcatatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAgg                                                                                                          >  2:47073‑M2/110‑149 (MQ=255)                                    cctcatatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAg                                                                                                           <  6:399589‑M2/39‑1 (MQ=255)                                     ctcatatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAggg                                                                                                         >  5:297975‑M2/109‑149 (MQ=255)                                      tcatatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATc                                                                                                             <  7:334631‑M2/37‑1 (MQ=255)                                      tcatatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATc                                                                                                             >  8:334631‑M2/108‑144 (MQ=255)                                           tttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCg                                                                                                    <  1:47073‑M2/46‑1 (MQ=255)                                            ttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAat                                                                                                                                <  4:381200‑M2/18‑1 (MQ=255)                                            ttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAat                                                                                                                                >  3:381200‑M2/102‑119 (MQ=255)                                              atagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAAc                                                                                                >  7:24680‑M2/100‑149 (MQ=255)                                                 gggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctaattcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCt                                                                                             <  8:263589‑M2/53‑1 (MQ=255)                                                  ggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTg                                                                                            >  5:14532‑M2/96‑149 (MQ=255)                                                    taaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTc                                                                                          <  7:262443‑M2/56‑1 (MQ=255)                                                    taaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagatttcaaataactatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGGTTCGCAACCCTGt                                                                                           >  3:32499‑M2/94‑148 (MQ=255)                                                          acctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttgaggtcaaaagattgaattattcactgtGTTTGTGGTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTaa                                                                                     <  5:9168‑M2/61‑1 (MQ=255)                                                           cctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAag                                                                                    <  6:269650‑M2/62‑1 (MQ=255)                                                            ctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAag                                                                                    >  5:152715‑M2/86‑147 (MQ=255)                                                             tgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAaggag                                                                                 >  3:77816‑M2/85‑149 (MQ=255)                                                               taaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAaggagg                                                                                <  8:24680‑M2/66‑1 (MQ=255)                                                                  agtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGc                                                                             >  5:240346‑M2/80‑148 (MQ=255)                                                                    tagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTAt                                                                          <  5:140057‑M2/72‑1 (MQ=255)                                                                      gtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATgt                                                                        >  3:47685‑M2/76‑149 (MQ=255)                                                                       tgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATgtc                                                                       >  2:418013‑M2/75‑149 (MQ=255)                                                                             attacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATgtcgtc                                                                    <  8:318145‑M2/78‑1 (MQ=255)                                                                              tttaccgcctagcaaaaaacagtttttaaatatctatttcatgtcaatagattgaattattctctggGATTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAAGCCTGTCATTACGGAGGAGCTATGTCGTCAAcc                                                                <  2:69353‑M2/82‑1 (MQ=255)                                                                              ttacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAAcc                                                                >  5:366930‑M2/68‑149 (MQ=255)                                                                                 cccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTa                                                             >  6:310190‑M2/65‑149 (MQ=255)                                                                                 cccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTa                                                             <  4:77816‑M2/85‑1 (MQ=255)                                                                                  ccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTAc                                                            <  5:231623‑M2/86‑1 (MQ=255)                                                                                  ccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTAc                                                            >  2:239651‑M2/64‑149 (MQ=255)                                                                                  ccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAAACCTGTCATTAAGGAGGAGCTATTTCGTCAACGCTAc                                                            >  4:9893‑M2/64‑149 (MQ=255)                                                                                   cgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTAc                                                            >  2:376210‑M2/63‑148 (MQ=255)                                                                                         gcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGaa                                                       <  6:240346‑M2/91‑1 (MQ=255)                                                                                         gcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGaa                                                       <  1:239651‑M2/91‑1 (MQ=255)                                                                                           aaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCa                                                   <  6:14532‑M2/95‑1 (MQ=255)                                                                                            aactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAg                                                  >  2:307708‑M2/54‑149 (MQ=255)                                                                                               tccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGt                                                 >  7:162980‑M2/51‑147 (MQ=255)                                                                                                 cagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTaa                                               <  5:310190‑M2/99‑1 (MQ=255)                                                                                                 cagttttcaaatatctatttcacgtcaaaagattgaattcttcactggGTTTGTGTTATCTTAAATATTCACCCTGAAGAGACTCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAg                                              <  6:57320‑M2/100‑1 (MQ=255)                                                                                                    ttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGaca                                          >  7:1679‑M2/46‑149 (MQ=255)                                                                                                    ttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGaca                                          <  6:366930‑M2/104‑1 (MQ=255)                                                                                                       tcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACg                                        <  1:418013‑M2/106‑1 (MQ=255)                                                                                                         aaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTg                                     >  5:44272‑M2/41‑149 (MQ=255)                                                                                                         aaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTg                                     >  8:150736‑M2/41‑149 (MQ=255)                                                                                                          aatatctatttcaggtcaaaagattgaattattcactggGTGTGTGTTATCTTTAATATAAACACTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATTTCGTCAACCCTACGAGAAGCAAGGAAGGACACgttt                                     >  1:192857‑M2/40‑147 (MQ=255)                                                                                                              tctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGc                                >  4:289946‑M2/36‑149 (MQ=255)                                                                                                              tctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGc                                >  7:364337‑M2/36‑149 (MQ=255)                                                                                                              tctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGc                                >  8:258361‑M2/36‑149 (MQ=255)                                                                                                                    tcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAg                           <  2:290951‑M2/119‑1 (MQ=255)                                                                                                                       ggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACACTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATa                        >  5:16187‑M2/27‑148 (MQ=255)                                                                                                                         tcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATaaaa                     <  2:254180‑M2/125‑1 (MQ=255)                                                                                                                         tcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATaaaa                     <  8:162980‑M2/125‑1 (MQ=255)                                                                                                                              agattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTAc                <  1:376210‑M2/130‑1 (MQ=255)                                                                                                                                         ttcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGCTAAAACTTACCACTACTACAg     >  4:69739‑M2/9‑149 (MQ=255)                                                                                                                                         ttcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAg     <  1:307708‑M2/141‑1 (MQ=255)                                                                                                                                            actggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCt  >  1:180601‑M2/6‑149 (MQ=255)                                                                                                                                            actggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCt  >  2:399105‑M2/6‑149 (MQ=255)                                                                                                                                            actggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCt  >  5:190005‑M2/6‑149 (MQ=255)                                                                                                                                                 |                                                                                                                                                TCTCTGTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCT  >  NC_000913/1335617‑1335904

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑