New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1733711 =	NA (NA)	9 (0.270)	8/232	2.8	NA	intergenic (+8/+43)	lhr/grxD	putative ATP‑dependent helicase/glutaredoxin‑4
	?	NC_000913	1733741 =	NA (NA)					intergenic (+38/+13)	lhr/grxD	putative ATP‑dependent helicase/glutaredoxin‑4

TTTACGCTAACAGAAGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACGCTGATACATTTCGATCACGATATCACAACCGCCGACCAGCTCGCCGTCAAC  >  NC_000913/1733596‑1733876                                                                                                                                                  |                                                                                                                                        tttACGCTAACAGAAGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTg                                                                                                                                      >  6:149235/1‑149 (MQ=255)   tACGCTAACAGAAGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGc                                                                                                                                     <  2:159954/148‑1 (MQ=255)         aaCAGAAGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACg                                                                                                                               >  4:70531/1‑148 (MQ=255)               aGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGattatt                                                                                                                        <  3:70531/149‑1 (MQ=255)                gTGAATGATCTACCGGTCCGGCAACCGCCGCTGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATACGTCAGTATTGCCGGACGGATTATTc                                                                                                                       >  8:119103/1‑149 (MQ=255)                  gAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTcc                                                                                                                      <  4:15270/148‑1 (MQ=255)                                  cGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTc                                                                                                        >  1:74253/1‑146 (MQ=255)                                  cGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTc                                                                                                        <  2:74253/146‑1 (MQ=255)                                  cGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGa                                                                                                     >  6:133158/1‑149 (MQ=255)                                     cAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACtt                                                                                                  <  5:149235/149‑1 (MQ=255)                                            cGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTg                                                                                                                                      >  6:13098/1‑106 (MQ=255)                                            cGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTg                                                                                                                                      <  5:13098/106‑1 (MQ=255)                                            agcagctgatcaaagaaactgccgctaaatacaagtctgaagagccggacgcggaataatccgtcctgcaatACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGat                                                                                                                            <  3:59022‑M1/44‑1 (MQ=255)                                            agcagctgatcaaagaaactgccgctaaatacaagtctgaagagccggacgcggaataatccgtcctgcaatACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGat                                                                                                                            >  4:59022‑M1/73‑116 (MQ=255)                                                  ttACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCgg                                                                                       >  4:67465/1‑147 (MQ=255)                                                       aaagaaactgccgctaaatacaagtctgaagagccggacgcggaataatccgtcctgcaatACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTcc                                                                                                                      <  5:33889‑M1/50‑1 (MQ=255)                                                       aaagaaactgccgctaaatacaagtctgaagagccggacgcggaataatccgtcctgcaatACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTcc                                                                                                                      >  6:33889‑M1/62‑111 (MQ=255)                                                          ctgcGTGAGGCGGGATTTTCAAGTTCGCCACAACGGCTGGATTGGGGATAGAGAAAGCACTGACGGATGCCAGTTCGCATCCGTCAGTATTGCAGGACGGAGTATTCCGCGTCCGGCGCTTCAGACTTGTATTTAGCGGCAGTTGCt                                                                               <  6:82512/147‑1 (MQ=255)                                                                   gCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAgctg                                                                    >  3:46996/1‑149 (MQ=255)                                                                                gTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCa                                                       <  4:46996/149‑1 (MQ=255)                                                                                     ccACAAGGGCTTGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTcc                                                                                                                >  5:15142/1‑87 (MQ=255)                                                                                     ccACAAGGGCTTGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTcc                                                                                                                <  6:15142/87‑1 (MQ=255)                                                                                                ggaataatccgtcctgcaatactgacggatgcgaacgggcatccgtcagtATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCttt                                                                             <  5:33889‑M2/61‑1 (MQ=255)                                                                                                ggaataatccgtcctgcaatactgacggatgcgaacgggcatccgtcagtATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCttt                                                                             >  6:33889‑M2/51‑111 (MQ=255)                                                                                                      atccgtcctgcaatactgacggatgcgaacgggcatccgtcagtATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAgctgct                                                                  >  4:59022‑M2/45‑116 (MQ=255)                                                                                                      atccgtcctgcaatactgacggatgcgaacgggcatccgtcagtATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAgctgct                                                                  <  3:59022‑M2/72‑1 (MQ=255)                                                                                                        gATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACGCTGATACATTTCGATCa                                    <  8:99349/144‑1 (MQ=255)                                                                                                        gATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACGCTGATACATTTCGATCa                                    >  7:99349/1‑144 (MQ=255)                                                                                                         aTAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACGCTGATACATTTCGATCACGatat                              >  8:104273/1‑149 (MQ=255)                                                                                                              gaAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACGCTGATACATTTCGATCACGATATCACaa                         >  1:20943/1‑149 (MQ=255)                                                                                                                     CTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACGCTGATACATTTCGATCACGata                               >  1:176135‑M1/1‑136 (MQ=255)                                                                                                                     CTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACGCTGATACATTTCGATCACGata                               <  2:176135‑M1/136‑1 (MQ=255)                                                                                                                      tgacggatgcgaacgggcatccgtcagtATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACGCTGATACAttt                                          >  8:96577‑M2/29‑124 (MQ=255)                                                                                                                      tgacggatgcgaacgggcatccgtcagtATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACGCTGATACAttt                                          <  7:96577‑M2/96‑1 (MQ=255)                                                                                                                      tgacggatgcgaacgggcatccgtcagtATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACGCTGATACATTTCGATCACGat                                >  1:19802‑M2/29‑134 (MQ=255)                                                                                                                      tgacggatgcgaacgggcatccgtcagtATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACGCTGATACATTTCGATCACGat                                <  2:19802‑M2/106‑1 (MQ=255)                                                                                                                          ggatgcgaacgggcatccgtcagtATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACGCTGATACATTTCGATCACGATATCACAACCGCCGACCAGc             >  2:21735‑M2/25‑149 (MQ=255)                                                                                                                              GCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACGCTGATACAttt                                          >  6:149140‑M1/1‑116 (MQ=255)                                                                                                                              GCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACGCTGATACAttt                                          <  5:149140‑M1/116‑1 (MQ=255)                                                                                                                               CCCGTTCGCATCCGTCAGTATTGCAGGACGGATTCTTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACGCTGATACATTTCGATCACGATATCACAACCGCCGACCAGCTCGcc        >  7:119103‑M1/1‑149 (MQ=255)                                                                                                                                  gTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACGCTGATACATTTCGATCACGATATCACAACCGCCGACCAGCTCGCCGTc     <  3:67465/149‑1 (MQ=255)                                                                                                                                      gcatccgtcagtATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACGCTGATACATTTCGATCACGATATCACAACCGCCGACCAGCTCGCCGTCAAc  <  7:104273‑M2/136‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                        TTTACGCTAACAGAAGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACGCTGATACATTTCGATCACGATATCACAACCGCCGACCAGCTCGCCGTCAAC  >  NC_000913/1733596‑1733876

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.