| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,625,589 | Δ95,041 bp | yhhJ–[mokA] | 82 genes yhhJ, rbbA, yhiI, yhiJ, yhiL, yhiL, yhiM, yhiN, pitA, uspB, uspA, dtpB, rsmJ, prlC, rlmJ, gor, dinQ, agrA, agrB, arsR, arsB, arsC, yhiS, insH1, yhiS, slp, dctR, yhiD, hdeB, hdeA, hdeD, arrS, gadE, mdtE, mdtF, gadW, gadY, gadX, gadA, yhjA, treF, yhjB, yhjC, yhjD, yhjE, yhjG, yhjH, kdgK, yhjJ, dctA, yhjK, bcsC, bcsZ, bcsB, bcsA, bcsQ, yhjR, bcsE, bcsF, bcsG, ldrD, rdlD, yhjV, dppF, dppD, dppC, dppB, dppA, proK, eptB, yhjX, yhjY, tag, yiaC, bisC, yiaD, ghrB, yiaF, yiaG, cspA, hokA, [mokA] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3625589 | 3720629 | 95041 | 91 [0] | [0] 91 | yhhJ–[mokA] | yhhJ,rbbA,yhiI,yhiJ,yhiL,yhiL,yhiM,yhiN,pitA,uspB,uspA,dtpB,rsmJ,prlC,rlmJ,gor,dinQ,agrA,agrB,arsR,arsB,arsC,yhiS,insH1,yhiS,slp,dctR,yhiD,hdeB,hdeA,hdeD,arrS,gadE,mdtE,mdtF,gadW,gadY,gadX,gadA,yhjA,treF,yhjB,yhjC,yhjD,yhjE,yhjG,yhjH,kdgK,yhjJ,dctA,yhjK,bcsC,bcsZ,bcsB,bcsA,bcsQ,yhjR,bcsE,bcsF,bcsG,ldrD,rdlD,yhjV,dppF,dppD,dppC,dppB,dppA,proK,eptB,yhjX,yhjY,tag,yiaC,bisC,yiaD,ghrB,yiaF,yiaG,cspA,hokA,[mokA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3625588 | 0 (0.000) | 91 (1.070) | 76/282 | 0.1 | 100% | intergenic (+74/+91) | yhhI/yhhJ | putative transposase/putative ABC transporter permease |
| ? | NC_000913 | 3720630 = | NA (NA) | pseudogene (3/185 nt) | mokA | pseudogene, overlapping regulatory peptide, enables hokB; completely contained in another CDS | |||||
AGCTCATAACTCTCCTGTTTAATATGCAATTCACACAGTGAATCTCTTATCATCCAGGTGAAAAATAAAAGCGTGAAACAAATCACTATTAAAGAAAGTAATCTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTCGGCACGTTTT > NC_000913/3720482‑3720775 | gacgtaagatgcgaaaagcagccatggacagaaactatctggcgtcagtccttgcggggagcgggctttcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcag < 3:93034‑M2/1‑1 (MQ=255)gacgtaagatgcgaaaagcagccatggacagaaactatctggcgtcagtccttgcggggagcgggctttcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcag > 6:178467‑M2/149‑149 (MQ=255) acgtaagatgcgaaaagcagccatggacagaaactatctggcgtcagtccttgcggggagcgggctttcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcagt < 4:20432‑M2/2‑1 (MQ=255) acgtaagatgcgaaaagcagccatggacagaaactatctggcgtcagtccttgcggggagcgggctttcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcagt < 8:58223‑M2/2‑1 (MQ=255) cgtaagatgcgaaaagcagccatggacagaaactatctggcgtcagtccttgcggggagcgggctttcgtaatcttgccctgaatacaggactgagtatcataaagccggttaactgaaactgtccaggttttgtgggtcagttcagt < 8:106683‑M2/2‑1 (MQ=255) aagatgcgaaaagcagccatggacagaaactatctggcgtcagtccttgcggggagcgggctttcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATg > 2:361123‑M2/144‑148 (MQ=255) aagatgcgaaaagcagccatggacagaaactatctggcgtcagtccttgcggggagcgggctttcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATg > 2:15863‑M2/144‑148 (MQ=255) aagatgcgaaaagcagccatggacagaaactatctggcgtcagtccttgcggggagcgggctttcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATg > 6:193065‑M2/144‑148 (MQ=255) atgcgaaaagcagccatggacagaaactatctggcgtcagtccttgcggggagcgggctttcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACt < 1:173726‑M2/9‑1 (MQ=255) gcgaaaagcagccatggacagaaactatctggcgtcagtccttgcggggagcgggctttcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgcaactgtccaggttttgggggtcagttcaGTATGTACTg > 6:246315‑M2/139‑148 (MQ=255) gaaaagcagccatggacagaaactatctggcgtcagtccttgcggggagcgggcttgcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccagggtttggggggcagttcaGTATGTACTGCAc < 1:130751‑M2/13‑1 (MQ=255) atcaatggacagaaactatctggcttcagtccttgcgggtagagggatttagtaatctttcactgaatacaggactgagtatcaaaaagccggttaactgaaactgtccagtttttgggggtaagttcaGTATGTACTGAACCCAttt < 6:351945‑M2/19‑1 (MQ=255) agccatggacagaaactatctggcgtcagtccttgcggggagcgggctttcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCAtttt < 6:86332‑M2/20‑1 (MQ=255) gccatggacagaaactatctggcgtcagtccttgcggggagcgggctttcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTttg < 2:222009‑M2/21‑1 (MQ=255) gccatggacagaaactatctggcgtcagtccttgcgcggagcgggctttcgtaatcttgcccagaatacaggactgactatcaaaaagccggttaactgaaactgtccaggttttgggggacagtgcaGTATGTACTGCACCCATTttg > 1:250958‑M2/129‑149 (MQ=255) atggacagaaactatctggcgtcagtccttgcggggagcgggctttcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTttgttg < 8:86899‑M2/24‑1 (MQ=255) acagaaactatctggcgtcagtccttgcggggagcgggctttcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGAc > 7:212468‑M2/122‑148 (MQ=255) cagaaactatctggcgtcagtccttgcggggagcgggctttcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGa < 1:361123‑M2/29‑1 (MQ=255) cagaaactatctggcgtcagtccttgcggggagcgggctttcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGa < 5:193065‑M2/29‑1 (MQ=255) aaactatctggcgtcagtccttgcggggagcgggctttcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATg > 4:331737‑M2/118‑148 (MQ=255) aactatctggcgtcagtccttgcggggagcgggctttcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTttgtt < 1:54799‑M2/23‑1 (MQ=255) aactatctggcgtcagtccttgcggggagcgggctttcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTttgtt > 2:54799‑M2/117‑139 (MQ=255) actatctggcgtcagtccttgcggggagcgggctttcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGaaa < 7:188957‑M2/34‑1 (MQ=255) tctggcgtcagtccttgcggggagcgggctttcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGAACCCATTTTGTTGGACGATGAAATgg > 4:257599‑M2/112‑148 (MQ=255) gcgtcagtccttgcggggagcgggctttcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGaa < 4:203703‑M2/39‑1 (MQ=255) gcgtcagtccttgcggggagcgggctttcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGa < 3:257599‑M2/38‑1 (MQ=255) cagtccttgcggggagcgggctttcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGcccc < 8:212468‑M2/46‑1 (MQ=255) gtccttgcggggagcgggctttcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaacggaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCt > 1:103709‑M2/102‑148 (MQ=255) tccttgcggggagcgggctttcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTaa > 5:153010‑M2/101‑149 (MQ=255) cggggagcgggctttcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGt > 4:79958‑M2/95‑148 (MQ=255) ggggagcgggctttcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTc > 4:80409‑M2/94‑148 (MQ=255) gggagcgggctttcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCa > 5:37928‑M2/93‑148 (MQ=255) gcgggctttcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGcccc > 3:180679‑M2/89‑134 (MQ=255) gcgggctttcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGcccc < 4:180679‑M2/46‑1 (MQ=255) gctttcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCaaaa > 6:100823‑M2/85‑149 (MQ=255) tttcgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATa > 4:321836‑M2/83‑149 (MQ=255) cgtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATAcc < 3:297457‑M2/69‑1 (MQ=255) gtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATAccc < 8:62374‑M2/70‑1 (MQ=255) gtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATAccc < 5:100823‑M2/70‑1 (MQ=255) gtaatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCt > 2:178745‑M2/79‑149 (MQ=255) taatcttgcccttaatacaggtctgagtatcaaaaagccggttaactgaaaatttccaggttttgggtttcagttcaTTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCtt < 1:15863‑M2/72‑1 (MQ=255) taatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCtt < 3:79958‑M2/72‑1 (MQ=255) taatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCtt < 5:61332‑M2/72‑1 (MQ=255) taatcttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcacttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCtt > 1:158997‑M2/78‑149 (MQ=255) cttgccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTg > 1:139269‑M2/74‑148 (MQ=255) ccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGaaaa < 1:29520‑M2/79‑1 (MQ=255) ccctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAg < 3:321836‑M2/80‑1 (MQ=255) cctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAgc > 4:209664‑M2/69‑149 (MQ=255) ctgaatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAgcg > 7:115403‑M2/68‑149 (MQ=255) aatacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCt > 7:45108‑M2/65‑149 (MQ=255) atacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCtt > 3:114572‑M2/64‑149 (MQ=255) atacaggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCtt < 5:178467‑M2/86‑1 (MQ=255) aggactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATg > 2:283556‑M2/60‑95 (MQ=255) gcctgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTc < 8:346691‑M2/92‑1 (MQ=255) gactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTc < 3:209664‑M2/92‑1 (MQ=255) gactgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTc > 5:314459‑M2/58‑149 (MQ=255) ctgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGt < 3:28188‑M2/94‑1 (MQ=255) ctgagtatcaaaaagcaggttaactgaaactgtccatgttttgggtgtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGt < 1:259244‑M2/94‑1 (MQ=255) tgattatcaaaaagccgtttaaatgaaactgtccaggttttgggggtcagttcaGTATGTACTTCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGaaaa < 7:20017‑M2/79‑1 (MQ=255) tgagtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATCGAATAGCCACTAATATGTCAAAGCCAAAATACCCTATTCaaaa > 8:20017‑M2/55‑133 (MQ=255) gtatcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAAt < 6:37928‑M2/98‑1 (MQ=255) tatcaaaaagccggttaactgaaactgtccaggtttggggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATTTCAAAGCCAAAATAACCTTTTGAACTGCGCCTTGAATTAGTGAAt > 6:19455‑M2/51‑148 (MQ=255) atcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAat < 7:97060‑M2/50‑1 (MQ=255) atcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAat > 8:97060‑M2/50‑99 (MQ=255) tcaaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCac > 4:31400‑M2/49‑149 (MQ=255) aaatatccggttaactgaaactgtccaggttttgggggtcaggtcaGTATGTAATGCACCCATTTTGTTTGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAATGCGCCTTGAAGTCGTGAATCac < 2:278459‑M2/101‑1 (MQ=255) aaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATATCCCCTAATATGTCAAATCCAAAATACACTTTTGAAAAGAGCCTTGAAGTCTTGAATCac > 1:278459‑M2/47‑147 (MQ=255) aaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCtttt < 4:115160‑M2/74‑1 (MQ=255) aaaaagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCtttt > 3:115160‑M2/47‑120 (MQ=255) aagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTc < 8:94115‑M2/92‑1 (MQ=255) aagccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTc > 7:94115‑M2/44‑135 (MQ=255) agccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTc < 2:139269‑M2/107‑1 (MQ=255) ccggttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTcac < 5:103853‑M2/109‑1 (MQ=255) ttaactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACt < 1:320663‑M2/113‑1 (MQ=255) aactgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACtg < 3:13315‑M2/114‑1 (MQ=255) actgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACtga < 8:115403‑M2/115‑1 (MQ=255) ctgaaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAATCGCCTTGAAGTCGTCAATCACTACTTCACAACtcat > 8:247813‑M2/33‑148 (MQ=255) aaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACtgatga < 7:196301‑M2/118‑1 (MQ=255) aaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACtgatga > 8:196301‑M2/30‑147 (MQ=255) aaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACtgatga < 2:103709‑M2/118‑1 (MQ=255) aaactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGatgatg < 3:31400‑M2/120‑1 (MQ=255) aactgtccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCATAATATGTCAAAGCCAAAAAACCCTTTTGAAAAGCGCCTTGAAGTCTTGAATCACTACTTCACAACTGATGAAgg > 2:155298‑M2/29‑149 (MQ=255) tccaggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTa > 5:15651‑M2/24‑147 (MQ=255) caggttttgggggtcagttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCactac < 6:166964‑M2/104‑1 (MQ=255) aggttttgggtgtcagttcaGTATGTACTGCACCCATTTTGTTTGACGATGAATTGGAATAGCCCCTATTATGTGAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCTCTACTTCACAACTGATGATGGTTACAGGa < 8:306421‑M2/129‑1 (MQ=255) gtgtcagttcaGTATGTACGTCACCCATTTTTTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGGCGTTAATCACTACTTCACACCTGATGATGGGTACAGGATCATCTCg < 3:309527‑M2/137‑1 (MQ=255) gggtcaggtcaGTATGTACTGCACCCATTTTGTTGGACGATGAACTGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTCgg < 3:187315‑M2/138‑1 (MQ=255) gttcaGTATGTAATGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTAGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTCTGCACGtt < 1:75336‑M2/144‑1 (MQ=255) ttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGaa < 8:274300‑M2/97‑1 (MQ=255) ttcaGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGaa > 7:274300‑M2/5‑101 (MQ=255) caGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTCGGCACGtttt < 5:246315‑M2/146‑1 (MQ=255) | AGCTCATAACTCTCCTGTTTAATATGCAATTCACACAGTGAATCTCTTATCATCCAGGTGAAAAATAAAAGCGTGAAACAAATCACTATTAAAGAAAGTAATCTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTCGGCACGTTTT > NC_000913/3720482‑3720775 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |