New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2453080	56 (0.650)	3 (0.040)	3/252	NT	5.5%	pseudogene (1922/2646 nt)	yfcU	pseudogene, FimD fimbrial export usher family;putative membrane; Not classified; putative outer membrane protein
	?	NC_000913	= 2453107	50 (0.600)					pseudogene (1895/2646 nt)	yfcU	pseudogene, FimD fimbrial export usher family;putative membrane; Not classified; putative outer membrane protein

CTGGGTACGGTGAAGTGCGCCGCCGTGGGTAGTAAGCGTTGCGCCGCCCTGTAACGACAAGCCCGCAGAGGTGTATTGCCCTTCATGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGGCTGCTGTCCGTCCCACTGCCATAGTTGCCGTTATAGCTAACGGTACTGTTGTCGCCCCACGGCATA  >  NC_000913/2452962‑2453253                                                                                                                                                  |                                                                                                                                                   cTGGGTACGGTGAAGTGCGCCGCCGTGGGTAGTAAGCGTTGCGCCGCCCTGTAACGACAAGCCCGCAGAGGTGTATTGCCCTTCATGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAAcg                                                                                                                                                  >  3:121535‑M2/1‑146 (MQ=255)  tGGGTACGGTGAAGTGCGCCGCCGTGGGTAGTAAGCGTTGCGCCGCCCTGTAACGACAAGCCCGCAGAGGTGTATTGCCCTTCATGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAAcgct                                                                                                                                                <  3:284449‑M2/149‑5 (MQ=255)    ggTATGGTGAAGTGCGCCGCCGTGGGTAGTAAGCGTTGCGCCGCCCTGTAACGACAAGCCCGCAGAGGTGTATTGCCCTTCATGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAAcgctgg                                                                                                                                              >  1:180296‑M2/1‑143 (MQ=255)    ggTACGGTGAAGTGCGCCGCCGTGGGTAGTAAGCGTTGCGCCGCCCTGTAACGACAAGCCCGCAGAGGTGTATTGCCCTTCATGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAAcgctg                                                                                                                                               >  8:178388‑M2/1‑143 (MQ=255)    ggTACGGTGAAGTGCGCCGCCGTGGGTAGTAAGCGTTGCGCCGCCCTGTAACGACAAGCCCGCAGAGGTGTATTGCCCTTCATGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAAcgctg                                                                                                                                               >  6:82238‑M2/1‑143 (MQ=255)    ggTACGGTGAAGTGCGCCGCCGTGGGTAGTAAGCGTTGCGCCGCCCTGTAACGACAAGCCCGCAGAGGTGTATTGCCCTTCATGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAAcgct                                                                                                                                                >  8:238958‑M2/1‑143 (MQ=255)         ggTGAAGTGCGCCGCCGTGGGTAGTAAGCGTTGCGCCGCCCTGTAACGACAAGCCCGCAGAGGTGTATTGCCCTTCATGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGgtgtgt                                                                                                                                         <  2:50191/149‑1 (MQ=255)             aaGTGCGCAGCCGTGGGTAGTAAGCGTTGCGCCGCCCTGTAACGACAAGCCCGCAGAGGTGTATTGCCCTTCATGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTg                                                                                                                                      <  7:373977/148‑1 (MQ=255)               gTGCGCCGCCGTGGGTAGTAAGCGTTGCGCCGCCCTGTAACGACAAGCCCGCAGAGGTGTATTGCCCTTCATGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCa                                                                                                                                   >  3:352091/1‑149 (MQ=255)               gTGCGCCGCCGTGGGTAGTAAGCGGTGCGCCGCCCTGGAACGACAAGCCCGCAGCGGTGTATTGCCCTTCATGGTAGTTCGCAGTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCa                                                                                                                                   <  4:173817/149‑1 (MQ=255)                 gcgcCGCCGTGGGTAGTAAGCGTTGCGCCGCCCTGTAACGACAAGCCCGCAGAGGTGTATTGCCCTTCATGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACt                                                                                                                                 >  4:116561/1‑149 (MQ=255)                  cgccgcCGTGGGTAGTAAGCGTTGCGCCGCCCTGTAACGACAAGCCCGCAGAGGTGTATTGCCCTTCATGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTg                                                                                                                                <  2:189081/149‑1 (MQ=255)                     cgccgTGGGTAGTAAGCGTTGCGCCGCCCTGTAACGACAAGCCCGCAGAGGTGTATTGCCCTTCATGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTg                                                                                                                             <  3:33933/149‑1 (MQ=255)                      gccgTGGGTAGTAAGCGTTGCGCCGCCCTGTAACGACAAGCCCGCAGAGGTGTATTGCCCTTCATGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGc                                                                                                                            <  6:153574/149‑1 (MQ=255)                             gtagtaAGCGTTGCGCCGCCCTGTAACGACAAGCCCGCAGAGGTGTATTGCCCTTCATGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGtt                                                                                                                     <  6:339750/149‑1 (MQ=255)                                 taAGCGTTGCGCCGCCCTGTAACGACAAGCCCGCAGAGGTGTATTGCCCTTCATGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAAc                                                                                                                 <  4:141292/149‑1 (MQ=255)                                    gCGTTGCGCCGCCCTGTAACGACAAGCCCGCAGAGGTGTATTGCCCTTCATGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGgt                                                                                                                                             >  6:149287/1‑118 (MQ=255)                                    gCGTTGCGCCGCCCTGTAACGACAAGCCCGCAGAGGTGTATTGCCCTTCATGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGgt                                                                                                                                             <  5:149287/118‑1 (MQ=255)                                      gTTGCGCCGCCCTGTAACGACAAGCCCGCAGAGGTGTATTGCCCTTCATGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATa                                                                                                            <  8:196579/149‑1 (MQ=255)                                         gcgcCGCCCTGTAACGACAAGCCCGCAGAGGTGTATTGCCCTTCATGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGt                                                                                                          <  3:116561/148‑1 (MQ=255)                                         gcgcCGCCCTGTAACGACAAGCCCGCAGAGGTGTATTGCCCTTCATGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGt                                                                                                          <  4:284449/148‑1 (MQ=255)                                           gcctccCTGTAACGACAAGCCCGCAGAGGTGTATTGCCCTTCATGGTAGTTCGCACTGAGGTCAACCGGCGCCAGCGAACCATCATGGCTGTATTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGa                                                                                                        <  1:93153/148‑1 (MQ=255)                                             cgccCTGTAACGACAAGCCCGCAGAGGTGTATTGCCCTTCATGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTc                                                                                                     <  4:73193/149‑1 (MQ=255)                                                    tAACTACAAGCCCGCAGAGGTGTATTGCCCTTCATGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCAt                                                                                              >  7:87124/1‑149 (MQ=255)                                                             gCCCGCAGAGGTGTATTGCCCTTCATGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGc                                                                                     >  6:142985/1‑149 (MQ=255)                                                                 gCAGAGGTGTATTGCCCTTCATGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTaa                                                                                  >  7:333931/1‑148 (MQ=255)                                                                         gtATTGCCCTTCATGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGa                                                                         >  6:196970/1‑149 (MQ=255)                                                                                 cTTCATGGTAGTTCGCAGTGAGGTCAACCTGCGCCAGCGAACGATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGgctg                                                                 <  7:393097/149‑1 (MQ=255)                                                                                 cTTCATGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGgctg                                                                 <  4:352091/149‑1 (MQ=255)                                                                                  ttCATGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGgctgc                                                                >  6:218071/1‑149 (MQ=255)                                                                                  ttCATGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGgctgc                                                                >  5:2588/1‑149 (MQ=255)                                                                                   tCATGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGgctgct                                                               >  6:219680/1‑149 (MQ=255)                                                                                    cATGGTAGTTCGCACTGACGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGAGTCATCGACACGGCTAAAATAACCGACCTGGctgctg                                                              >  2:238939/1‑149 (MQ=255)                                                                                     aTGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGGCTGCTgt                                                             >  6:87494/1‑149 (MQ=255)                                                                                     aTGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGGCTGCTgt                                                             >  2:19320/1‑149 (MQ=255)                                                                                        gTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGGCTGCTgtcc                                                           <  4:158534/148‑1 (MQ=255)                                                                                               gCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGGCTGCTGTCCGTCCCACt                                                   <  8:87124/149‑1 (MQ=255)                                                                                                 aCTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGGCTGCTGTCCGTCCCACTGc                                                 >  6:98533/1‑149 (MQ=255)                                                                                                 aCTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGGCTGCTGTCCGTCCCACTGc                                                 >  3:184594/1‑149 (MQ=255)                                                                                                   tGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGGCTGCTGTCCGTCCCACTGCCa                                               >  7:79307/1‑149 (MQ=255)                                                                                                   tGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGGCTGCTGTCCGTCCCACTGCCa                                               >  3:336142/1‑149 (MQ=255)                                                                                                      ggTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGGCTGCTGTCCGTCCCACTGCCATAg                                            <  5:196970/149‑1 (MQ=255)                                                                                                         cAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGGCTGCTGTCCGTCCCACTGCCATa                                             <  2:393939/145‑1 (MQ=255)                                                                                                         cAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGGCTGCTGTCCGTCCCACTGCCATa                                             >  1:393939/1‑145 (MQ=255)                                                                                                              tGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAAcgctggcgcaggttgacctcagtgcgaactaccatgaagggcaatacacctctgcgggcttgtcgttacagggcggcgcaacgcttactacccacggcggcgcacttcaccg                                    <  1:330843‑M2/149‑113 (MQ=255)                                                                                                               gcgcCAGCGAACCATCATGGCTGTAGTAGCCATCAAcgctggcgcaggttgacctcagtgcgaactaccatgaagggcaatacacctctgcgggcttgtcgttacagggcggcgcaacgcttactacccacggcggcgcacttcaccg                                    <  1:354858‑M2/148‑113 (MQ=255)                                                                                                                cgcCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGGCTGCTGTCCGTCCCACTGCCATAGTTGCCGTta                                   <  5:98533/148‑1 (MQ=255)                                                                                                                cgcCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGGCTGCTGTCCGTCCCACTGCCATAGTTGCCGTta                                   <  6:2588/148‑1 (MQ=255)                                                                                                                 gcCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGGCTGCTGTCCGTCCCACTGCCATAGTTGCCGTtata                                 <  5:219680/149‑1 (MQ=255)                                                                                                                  ccAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGGCTGCTGTCCGTCCCACTGCCATAGTTGCCGTTATAg                                <  1:398776/149‑1 (MQ=255)                                                                                                                        aaCCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGGCTGCTGTCCGTCCCACTGCCATAGTTGCCGTTATAGCTAACg                          <  8:333931/149‑1 (MQ=255)                                                                                                                        aaCCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGGCTGCTGTCCGTCCCACTGCCATAGTTGCCGTTATAGCTAACg                          >  1:72130/1‑149 (MQ=255)                                                                                                                         aCCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGGCTGCTGTCCGTCCCACTGCCATAGTTGCCGTTATAGCTAACgg                         >  4:134190/1‑149 (MQ=255)                                                                                                                          ccATCATGGCTGTAGTAGCCATCAACGCTGGTTTGTTTGTCACTGGTGCCGATGTTCACCTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGGCTGCTGTCCGTCCCACTGCCATAGTTGCCGTTATAGCTAACGGt                        <  7:154467/149‑1 (MQ=255)                                                                                                                           catcatGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGGCTGCTGTCCGTCCCACTGCCATAGTTGCCGTTATAGCTAACGGTa                       >  3:311801/1‑149 (MQ=255)                                                                                                                            atcatGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACTGCTAAAATAACCGACCTGGCTGCTGTCCGTCCCACTGCCa                                               <  7:210297/124‑1 (MQ=255)                                                                                                                            atcatGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACTGCTAAAATAACCGACCTGGCTGCTGTCCGTCCCACTGCCa                                               >  8:210297/1‑124 (MQ=255)                                                                                                                             tcatGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGGCTGCTGTCCGTCCCACTGCCATAGTTGCCGTTATAGCTAACGGTACt                     >  6:333667/1‑149 (MQ=255)                                                                                                                               atGGCTGTAGTAGCCATCAAcgctggcgcaggttgacctcagtgcgaactaccatgaagggcaatacacctctgcgggcttgtcgttacagggcggcgcaacgcttactacccacggcggcgcacttcaccgtacccagaatatgggc                    >  2:330843‑M2/1‑20 (MQ=255)                                                                                                                                    tGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGGCTGCTGTCCGTCCCACTGCCATAGTTGCCGTTATAGCTAACGGTACTGTTGTCg              >  1:10627/1‑149 (MQ=255)                                                                                                                                        gtagCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAAACGACATGGCTGCTGTCCGTCCCACTGCCATAGTTGCCGATATAGCTAACGGTACTGTTGTCGccc           >  6:265293/1‑148 (MQ=255)                                                                                                                                         tagCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGGCTGCTGTACGTCCCACTGCCATAGTTGCCGTTATAGCTAACGGTACTGTTGTCGCCCCa         >  3:69736/1‑149 (MQ=255)                                                                                                                                              aTCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGGCTGCTGTCCGTCCCACTGCCATAGTTGCCGTTATAGCTAACGGTACTGTTGTCGCCCCACGGCa    >  4:18305/1‑149 (MQ=255)                                                                                                                                               tCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGGCTGCTGTCCGTCCCACTGCCATAGTTGCCGTTATAGCGAACGGTACTGTTGTCGCCCCACGGCa    >  6:47223/1‑148 (MQ=255)                                                                                                                                                 aaCGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGGCTGCTGTCCGTCCCACTGCCATAGTTGCCGTTATAGCTAACGGTACTGTTGTCGCCCCACGGCATa  <  3:134190/148‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                   CTGGGTACGGTGAAGTGCGCCGCCGTGGGTAGTAAGCGTTGCGCCGCCCTGTAACGACAAGCCCGCAGAGGTGTATTGCCCTTCATGGTAGTTCGCACTGAGGTCAACCTGCGCCAGCGAACCATCATGGCTGTAGTAGCCATCAACGCTGGTGTGTTTGTCACTGGTGCCGATGTTCAACTGATAGTGAGTCGCGTCATCGACACGGCTAAAATAACCGACCTGGCTGCTGTCCGTCCCACTGCCATAGTTGCCGTTATAGCTAACGGTACTGTTGTCGCCCCACGGCATA  >  NC_000913/2452962‑2453253

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.