Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 3,922,629 IS5 (–) +4 bp intergenic (‑189/+425) atpI ← / ← rsmG ATP synthase, membrane‑bound accessory factor/16S rRNA m(7)G527 methyltransferase, SAM‑dependent; glucose‑inhibited cell‑division protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3652036 =NA (NA)118 (0.890) 92/260 0.2 95.8% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 = 3922632 5 (0.040)intergenic (‑192/+425) atpI/rsmG ATP synthase, membrane‑bound accessory factor/16S rRNA m(7)G527 methyltransferase, SAM‑dependent; glucose‑inhibited cell‑division protein
* ? NC_000913 = 3653230NA (NA)178 (1.350) 127/260 0.0 97.2% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 3922629 = 5 (0.040)intergenic (‑189/+428) atpI/rsmG ATP synthase, membrane‑bound accessory factor/16S rRNA m(7)G527 methyltransferase, SAM‑dependent; glucose‑inhibited cell‑division protein

Only 100 of 310 total aligned reads displayed.

GTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCT  >  NC_000913/3922483‑3922776
                                                                                                                                                  |                                                                                                                                                   
gTATAAACCTTTATGTAAGTCGTAGCTTCAAGAATCAAAAAGCGGTCAAATTATACGGGGCGCACCCGTGAGTTCACACAATCAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTTCATACAATTTCGACTTTtcttct                                                                                                                                                    <  5:137762/148‑1 (MQ=255)
 gacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTaa                                                                                                                                                  <  7:136927‑M2/4‑1 (MQ=255)
    atgaacatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAcc                                                                                                                                                <  1:159048‑M2/6‑1 (MQ=255)
     agaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCt                                                                                                                                              >  3:568700‑M2/142‑149 (MQ=255)
      gaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTg                                                                                                                                             >  8:331660‑M2/141‑149 (MQ=255)
              ttAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaa                                                                                                                                      <  4:285711‑M2/148‑13 (MQ=255)
               ttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGAt                                                                                                                                       <  5:456679‑M2/15‑1 (MQ=255)
               tAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaa                                                                                                                                      >  1:110847‑M2/1‑135 (MQ=255)
                 aGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataa                                                                                                                                   >  3:285711‑M2/1‑133 (MQ=255)
                             aaGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagctgggaaattc                                                                                                                       >  3:308772‑M2/1‑121 (MQ=255)
                                    actgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAAcgc                                                                                                                 <  4:462574‑M2/37‑1 (MQ=255)
                                        ctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTaaa                                                                                                            <  5:286520‑M2/42‑1 (MQ=255)
                                              tcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAAc                                                                                                                   >  2:449461‑M2/101‑135 (MQ=255)
                                                actgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTaa                                                                                                                                                  >  7:433‑M2/99‑102 (MQ=255)
                                                  ttATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcattt                                                                                                 >  8:584216‑M2/1‑100 (MQ=255)
                                                  tgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGAt                                                                                                  >  2:77617‑M2/97‑148 (MQ=255)
                                                        ggTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcgggg                                                                                                                             >  5:235678‑M2/1‑94 (MQ=255)
                                                         gaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTg                                                                                          >  7:282594‑M2/90‑149 (MQ=255)
                                                            ggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAAt                                                                                                                      <  2:296766‑M2/32‑1 (MQ=255)
                                                            cgcCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttc                                                                                        >  2:393764‑M2/1‑90 (MQ=255)
                                                            cgcCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttc                                                                                        >  5:318159‑M2/1‑90 (MQ=255)
                                                               ccccGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcgg                                                                                                                               <  6:310386‑M2/106‑20 (MQ=255)
                                                                agttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAaca                                                                                                          >  8:385264‑M2/83‑126 (MQ=255)
                                                                 ccGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt                                                                                  <  3:99029‑M2/149‑65 (MQ=255)
                                                                 ccGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttca                                                                                               >  7:84354‑M2/1‑85 (MQ=255)
                                                                        ttCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccga                                                                           <  3:336632‑M2/149‑72 (MQ=255)
                                                                         ctcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCGGATCACATAtt                                                                          >  3:443898‑M2/74‑149 (MQ=255)
                                                                           aaaCAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattt                                                                        <  8:130665‑M2/149‑75 (MQ=255)
                                                                           aaaCAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattt                                                                        <  3:472727‑M2/149‑75 (MQ=255)
                                                                            atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTgcg                                                                       <  7:331660‑M2/79‑1 (MQ=255)
                                                                             aCAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgc                                                                                                                                         <  3:113666‑M2/82‑10 (MQ=255)
                                                                               atgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCAt                                                                    >  5:601474‑M2/68‑149 (MQ=255)
                                                                                 tAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctc                                                                  <  6:570032‑M2/149‑81 (MQ=255)
                                                                                   accctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTc                                                                <  6:193278‑M2/86‑1 (MQ=255)
                                                                                   aGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTc                                                                <  6:271888/149‑1 (MQ=255)
                                                                                    gTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccg                                                               <  1:82124‑M2/149‑84 (MQ=255)
                                                                                    ccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCg                                                                                            <  2:178665‑M2/58‑1 (MQ=255)
                                                                                    ccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGt                                                                  >  8:168966‑M2/63‑146 (MQ=255)
                                                                                     tAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgt                                                              >  1:441013‑M2/1‑65 (MQ=255)
                                                                                     cctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATc                                                                                 <  6:94015‑M2/69‑1 (MQ=255)
                                                                                     cctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATc                                                                                 >  5:94015‑M2/62‑130 (MQ=255)
                                                                                      aGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgt                                                              <  2:114134‑M2/148‑85 (MQ=255)
                                                                                       tgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATcaca                                                                              <  2:406091‑M2/72‑1 (MQ=255)
                                                                                       tgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTcgcg                                                             >  1:557394‑M2/60‑148 (MQ=255)
                                                                                            tatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAg                                                        >  1:405361‑M2/55‑148 (MQ=255)
                                                                                             atggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCa                                                      >  8:207892‑M2/54‑149 (MQ=255)
                                                                                             aGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcct                                                      >  4:78137‑M2/1‑57 (MQ=255)
                                                                                                gctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCatat                                                   <  8:282594‑M2/99‑1 (MQ=255)
                                                                                                 ctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCAtatt                                                  <  4:158932‑M2/100‑1 (MQ=255)
                                                                                                  tccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATaa                                                                                                                    >  6:463505‑M2/49‑82 (MQ=255)
                                                                                                  tccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCAtatt                                                  >  3:70588‑M2/49‑148 (MQ=255)
                                                                                                  aaTAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat                                                 <  4:34136‑M2/149‑98 (MQ=255)
                                                                                                     agatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCAtatttatt                                              <  5:472780‑M2/104‑1 (MQ=255)
                                                                                                      aaTGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcag                                              >  6:499616‑M2/1‑48 (MQ=255)
                                                                                                       atgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTgg                                                                                                      <  1:212392‑M2/48‑1 (MQ=255)
                                                                                                       aTGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcc                                            <  6:546118‑M2/149‑103 (MQ=255)
                                                                                                        tgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTAc                                           >  2:95618‑M2/43‑149 (MQ=255)
                                                                                                            aaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGc                                                                                             >  3:242345‑M2/39‑95 (MQ=255)
                                                                                                            aaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGc                                                                                             <  4:242345‑M2/57‑1 (MQ=255)
                                                                                                            aaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTgg                                       <  3:505906‑M2/111‑1 (MQ=255)
                                                                                                             aaaTATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatt                                        <  8:446369‑M2/147‑107 (MQ=255)
                                                                                                              aaTATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagc                                             <  5:69335‑M2/141‑102 (MQ=255)
                                                                                                               catgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCa                                     >  7:479655‑M2/36‑148 (MQ=255)
                                                                                                                atgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCaaa                                   <  7:158379‑M2/115‑1 (MQ=255)
                                                                                                                  gatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATAtt                                                                          >  5:523575‑M2/33‑108 (MQ=255)
                                                                                                                     ctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAatgatg                              >  3:497266‑M2/30‑149 (MQ=255)
                                                                                                                        atatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAatgat                               <  5:351337‑M2/119‑1 (MQ=255)
                                                                                                                        atatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAatgat                               <  6:228308‑M2/119‑1 (MQ=255)
                                                                                                                        atatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCt                           >  1:533088‑M2/27‑149 (MQ=255)
                                                                                                                         tatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCtt                          >  6:612768‑M2/26‑149 (MQ=255)
                                                                                                                         aGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttc                          >  7:130665‑M2/1‑29 (MQ=255)
                                                                                                                          gTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCttt                         >  7:592657/1‑149 (MQ=255)
                                                                                                                          atcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCGGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCttt                         <  4:443898‑M2/125‑1 (MQ=255)
                                                                                                                           tcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCttt                         <  5:196878‑M2/125‑1 (MQ=255)
                                                                                                                           tcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTg                        >  5:185900‑M2/24‑149 (MQ=255)
                                                                                                                             agggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGa                                                                                   >  4:548442‑M2/22‑88 (MQ=255)
                                                                                                                               ggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGt                                                                                                     <  8:255031‑M2/49‑1 (MQ=255)
                                                                                                                               ggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGt                                                                                                     >  7:255031‑M2/20‑68 (MQ=255)
                                                                                                                                  aaTTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattt                   <  7:361307‑M2/147‑128 (MQ=255)
                                                                                                                                   aTTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaag                <  3:19758‑M2/149‑131 (MQ=255)
                                                                                                                                    ttGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaagg               <  5:561976‑M2/149‑132 (MQ=255)
                                                                                                                                     gttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTAt               <  4:50402‑M2/135‑1 (MQ=255)
                                                                                                                                      ttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGt                                                                                           >  4:572547‑M2/13‑71 (MQ=255)
                                                                                                                                      ttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCa                                                                                     <  7:184074‑M2/65‑1 (MQ=255)
                                                                                                                                      gCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggc              >  6:561976‑M2/1‑16 (MQ=255)
                                                                                                                                           ttttCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgacttgaatcagcctatttaga                                    <  6:378588‑M2/121‑111 (MQ=255)
                                                                                                                                           accttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATc                                                                                 <  5:50583‑M2/69‑1 (MQ=255)
                                                                                                                                           accttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATAttt        >  7:125320‑M2/8‑149 (MQ=255)
                                                                                                                                            ccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTcgc                                                              >  6:520027‑M2/7‑94 (MQ=255)
                                                                                                                                             cttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATAttt        >  5:424839‑M2/6‑147 (MQ=255)
                                                                                                                                             cttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCa      <  1:601744‑M2/144‑1 (MQ=255)
                                                                                                                                             cttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCa      <  2:533088‑M2/144‑1 (MQ=255)
                                                                                                                                             cttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCa      <  8:479655‑M2/144‑1 (MQ=255)
                                                                                                                                             cttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCa      <  2:216232‑M2/144‑1 (MQ=255)
                                                                                                                                              ttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTa                >  6:342876‑M2/5‑138 (MQ=255)
                                                                                                                                                tGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccag   <  2:582935‑M2/149‑144 (MQ=255)
                                                                                                                                                 gCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagt  <  1:219922‑M2/149‑145 (MQ=255)
                                                                                                                                                 cCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTc   >  1:394193‑M2/2‑148 (MQ=255)
                                                                                                                                                  cTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccca    >  1:299632‑M2/1‑4 (MQ=255)
                                                                                                                                                  cTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCt  >  3:394328/1‑148 (MQ=255)
                                                                                                                                                  |                                                                                                                                                   
GTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCT  >  NC_000913/3922483‑3922776

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.