New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4076176	27 (0.790)	5 (0.160)	5/254	3.5	14.8%	coding (31/873 nt)	yihY	BrkB family putative transporter, inner membrane protein
	?	NC_000913	= 4076196	32 (1.000)					coding (51/873 nt)	yihY	BrkB family putative transporter, inner membrane protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGTCTTTTTCGACGATAACGCCGATAATATAGAAGGAGCCAATCAGCTGGGCATTACCAGTATTCTGGTGAAAGATAAAACCACCATCCCGGACTATTTCGCGAAGGTGTTATGCTAAAAACCATTCAGGACAAAGCCAGGCACCGTACCCGTCCACTATGGGCCTGGCTAAAACTACTCTGGCAACGCATTGATGAGGACAACATGACAACCCTGGCAGGTAACCTTGCCTATGTGTCGTTGCTCTCATTAGTGCCGCTGGTTGCCGTTGTTTTTGC  >  NC_000913/4076035‑4076312                                                                                                                                              |                                                                                                                                         ggTCTTTTTCGACGATAACGCCGATAATATAGAAGGAGCCAATCCGCTGGGCATTACCAGTATTCTGGTGAAAGATAAAACCACCATCCCGGACTATTTCGCGAAGGTGTTATGCTAAAAACCATTCAGGACAAAGCCAGGCACCGAAc                                                                                                                                   >  5:133791/1‑149 (MQ=255)             cgaTAACGCCGATAATATAGAAGGAGCCAATCAGCTGGGCATTACCAGTATTCTGGTGAAAGATAAAACCACCATCCCGGACTATTTCGCGAAGGTGTTATGCTAAAAACCATTCAGGACAAAGCCAGGCACCGTACCCGTCCACTATg                                                                                                                       <  1:173589/149‑1 (MQ=255)                  aCGCCGATAATATAGAAGGAGCCAATCAGCTGGGCATTACCAGTATTCTGGTGAAAGATAAAACCACCATCCCGGACTATTTCGCGAAGGTGTTATGCTAAAAACCATTCAGGACAAAGCCAGGCACCGAACCCGTCCACTATGGGCCt                                                                                                                  <  6:133791/149‑1 (MQ=255)                         taataTAGAAGGAGCCAATCAGCTGGGCATTACCAGTATTCTGGTGAAAGATAAAACCACCATCCCGGACTATTTCGCGAAGGTGTTATGCTAAAAACCATTCAGGACAAAGCCAGGCACCGTACCCGTCCACTATGGGCCTGGCTaa                                                                                                            >  5:108993/1‑148 (MQ=255)                                               cTGGGCATTACCAGTATTCTGGTGAAAGATAAAACCACCATCCCGGACTATTTCGCGAAGGTGTTATGCTAAAAACCATTCAGGACAAAGCCAGGCACCGTACCCGTCCACTATGGGCCTGGCTAAAACTACTCTGGCAACGCATtgat                                                                                     <  6:108993/149‑1 (MQ=255)                                                  ggCATTACCAGTATTCTGGTGAAAGATAAAACCACCATCCCGGACTATTTCGCGAAGGTGTTATGCTAAAAACCATTCAGGACAAAGCCAGGCACCGTACCCGTCCACTATGGGCCTGGCTAAAACTACTCTGGCAACGCATTGATGAg                                                                                  <  5:54417/149‑1 (MQ=255)                                                                   ggTGAAAGATAAAACCACCATCCCGGACTATTTCGCGAAGGTGTTATGCTAAAAACCATTCAGGACAAAGCCAGGCACCGTACCCGTCCACTATGGGCCTGGCTAAAACTACTCTGGCAACGCATTGATGAGGACAACATGACAACCCt                                                                 >  2:81224/1‑149 (MQ=255)                                                                            tAAAACCACCATCCCGGACTATTTCGCGAAGGTGTTATGCTAAAAACCATTCAGGACAAAGCCAGGCACCGTACCCGTCCACTATGGGCCTGGCTaaaa                                                                                                          >  1:52116/1‑99 (MQ=255)                                                                            tAAAACCACCATCCCGGACTATTTCGCGAAGGTGTTATGCTAAAAACCATTCAGGACAAAGCCAGGCACCGTACCCGTCCACTATGGGCCTGGCTaaaa                                                                                                          <  2:52116/99‑1 (MQ=255)                                                                            tAAAACCACCATCCCGGACTATTTCGCGAAGGTGTTATGCTAAAAACCATTCAGGACAAAGCCAGGCACCGTACCCGTCCACTATGGGCCTGGCTAAAACTACTCTGGCAACGCATTGATGAGGACAACATGACAACCCTGGCAGGTaa                                                        >  7:93902/1‑149 (MQ=255)                                                                             aaaaCCACCATCCCGGACTATTTCGCGAAGGTGTTATGCTAAAAACCATTCAGGACAAAGCCAGGCACCGTACCCGTCCACTATGGGCCTGGCTAAAACTACTCTGGCAACGCATTGATGAGGACAACATGACAACCCt                                                                 <  8:113876/139‑1 (MQ=255)                                                                             aaaaCCACCATCCCGGACTATTTCGCGAAGGTGTTATGCTAAAAACCATTCAGGACAAAGCCAGGCACCGTACCCGTCCACTATGGGCCTGGCTAAAACTACTCTGGCAACGCATTGATGAGGACAACATGACAACCCt                                                                 >  7:113876/1‑139 (MQ=255)                                                                                       tCCCGGACTATTTCGCGAAGGTGTTATGCTAAAAACCATTCAGGACAAAGCCAGGCACCGTACCCGTCCACTATGGGCCTGGCTAAAACTACTCTGGCAACGCATTGATGAGGACAACATGACAACCCTGGCAGGTAACCTTGCCTAtg                                             >  2:37966/1‑149 (MQ=255)                                                                                         ccGGACTATTTCGCGAAGGTGTTATGCTAAAAACCATTCAGGACAAAGCCAGGCACCGTACCCGTCCACTATGGGCCTGGCTAAAACTACTCTGGCAACGCATTGATGAGGACAACATGACAACCCTGGCAGGTAACCTTGCCTAtgt                                            <  1:81224/148‑1 (MQ=255)                                                                                           ggACTATTTCGCGAAGGTGTTATGCTAAAAACCATTCAGGACAAAGCCAGGCACCGTACCCGTCCACTATGGGCCTGGCTAAAACTACTCTGGCAACGCATTGATGAGGACAACATGACAACCCTGGCAGGTAACCTTGCCTATGTGTc                                         >  6:61863/1‑149 (MQ=255)                                                                                               tATTTCGCGAAGGTGTTATGCTAAAAACCATTCAGGACAAAGCCAGGCACCGTACCCGTCCACTATGGGCCTGGCTAAAACTACTCTGGCAACGCATTGATGAGGACAACATGACAACCCTGGCAGGTAACCTTGCCTATGTGTCGTTg                                     >  4:13823/1‑149 (MQ=255)                                                                                                 tttCGCGAAGGTGTTATGCTAAAAACCATTCAGGACAAAGCCAGGCACCGTACCCGTCCACTATGGGCCTGGCTAAAACTACTCTGGCAACGCATTGATGAGGACAACATGACAACCCTGGCAGGTAACCTTGCCTATGTGTCGTTGct                                   >  8:96993/1‑149 (MQ=255)                                                                                                    cgcgAAGGTGTTATGCTAAAAACCATTCAGGACAAAGCCAGGCACCGTACCCGTCCACTATGGGCCTGGCTAAAACTACTCTGGCAACGCATTGATGAGGACAACATGACAACCCTGGCAGGTAACCTTGCCTATGTGTCGTTGctct                                 <  1:37966/148‑1 (MQ=255)                                                                                                                  gCTAAAAACCATTCAGGACAAAGCCAGGCACCGTACCCGTCCACTATGGGCCTGGCTAAAACTACTCTGGCAACGCATTGATGAGGACAACATGACAACCCTGGCAGGTAACCTTGCCTATGTGTCGTTGCTCTCATTAGTGCCGCTgg                  >  4:51386/1‑149 (MQ=255)                                                                                                                    tAAAAACCATTCAGGACAAAGCCAGGCACCGTACCCGTCCACTATGGGCCTGGCTAAAACTACTCTGGCAACGCATTGATGAGGACAACATGACAACCCTGGCAGGTAACCTTGCCTATGTGTCGTTGCTCTCATTAGTGCCGCTGGtt                >  4:113962/1‑149 (MQ=255)                                                                                                                      aaaaCCATTCAGGACAAAGCCAGGCACCGTACCCGTCCACTATGGGCCTGGCTAAAACTACTCTGGCAACGCATTGATGAGGACAACATGACAACCCTGGCAGGTAACCTTGCCTATGTGTCGTTGCTCTCATTAGTGCCGCTGGtt                <  3:13823/147‑1 (MQ=255)                                                                                                                      aaaaCCATTCAGGACAAAGCCAGGCACCGTACCCGTCCACTATGGGCCTGGCTAAAACTACTCTGGCAACGCATTGATGAGGACAACATGACAACCCTGGCAGGTAACCTTGCCTATGTGTCGTTGCTCTCATTAGTGCCGCTGGTTGc              >  1:76750/1‑149 (MQ=255)                                                                                                                            aTTCAGGACAAAGCCAGGCACCGTACCCGTCCACTATGGGCCTGGCTAAAACTACTCTGGCAACGCATTGATGAGGACAACATGACAACCCTGGCAGGTAACCTTGCCTATGTGTCGTTGCTCTCATTAGTGCCGCTGGTTGCCgttgt        >  6:49342/1‑149 (MQ=255)                                                                                                                                aGGACAAAGCCAGGCACCGTACCCGTCCACTATGGGCCTGGCTAAAACTACTCTGGCAACGCATTGATGAGGACAACATGACAACCCTGGCAGGTAACCTTGCCTa                                               >  4:39013/1‑106 (MQ=255)                                                                                                                                aGGACAAAGCCAGGCACCGTACCCGTCCACTATGGGCCTGGCTAAAACTACTCTGGCAACGCATTGATGAGGACAACATGACAACCCTGGCAGGTAACCTTGCCTa                                               <  3:39013/106‑1 (MQ=255)                                                                                                                                 ggACAAAGCCAGGCACCGTACCCGTCCACTATGGGCCTGGCTAAAACTACTCTGGCAACGCATTGATGAGGACAACATGACAACCCTGGCAGGTAACCTTGCCTATGTGTCGTTGCTCTCATTAGTGCCGCTGGTTGCCGTTGTTTTTg   >  8:126276/1‑149 (MQ=255)                                                                                                                                  gACAAAGCCAGGCACCGTACCCGTCCACTATGGGCCTGGCTAAAACTACTCTGGCAACGCATTGATGAGGACAACATGACAACCCTGGCAGGTAACCTTGCCTATGTGTCGTTGCTCTCATTAGTGCCGCTGGTTGCCGTTGTTTTTgc  >  1:145012/1‑149 (MQ=255)                                                                                                                                              |                                                                                                                                         GGTCTTTTTCGACGATAACGCCGATAATATAGAAGGAGCCAATCAGCTGGGCATTACCAGTATTCTGGTGAAAGATAAAACCACCATCCCGGACTATTTCGCGAAGGTGTTATGCTAAAAACCATTCAGGACAAAGCCAGGCACCGTACCCGTCCACTATGGGCCTGGCTAAAACTACTCTGGCAACGCATTGATGAGGACAACATGACAACCCTGGCAGGTAACCTTGCCTATGTGTCGTTGCTCTCATTAGTGCCGCTGGTTGCCGTTGTTTTTGC  >  NC_000913/4076035‑4076312

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.