Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3514381	3515105	725	33 [31]	[31] 32	[gph]–[dam]	[gph],rpe,[dam]

CGTTACCAATCCAGGTAATAACGCGTTCTTCACCTGCGACGGGCAACTCCAGCGCATACAGCGCCATATCTACCGCAGCAGCAAGACCAGGAGCACTGTCGACCAGCGTACCATCAAGATCAAAAGCGACGCCGCGAATATCTTCAAACTTATTCATGACTTACCTTTGCCAGTTC  >  NC_000913/3514233‑3514408                                                                                                                                                    |                             cGTTACCAATCCAGGTAATAACGCGTTCTTCACCTGCGACGGGCAACTCCAGCGCATACAGCGCCATATCTACCGCAGCAGCAAGACCAGGAGCACTGTCGACCAGCGTACCATCAAGATCAAAAGCGACGCCGCGAATATCTTCAAAc                             >  8:325277/1‑149 (MQ=255) cGTTACCAATCCAGGTAATAACGCGTTCTTCACCTGCGACGGGCAACTCCAGCGCATACAGCGCCATATCTACCGCAGCAGCAAGACCAGGAGCACTGTCGACCAGCGTACCATCAAGATCAAAAGCGACGCCGCGAATATCTTCAAAc                             <  8:285375/149‑1 (MQ=255) cGTTACCAATCCAGGTAATAACGCGTTCTTCACCTGCGACGGGCAACTCCAGCGCATACAGCGCCATATCTACCGCAGCAGCAAGACCAGGAGCACTGTCGACCAGCGTACCATCAAGATCAAAAGCGACGCCGCGAATATCTTCAAAc                             <  7:302109/149‑1 (MQ=255)  gTTACCAAGCCAGGTAATAACGCGTTCTTCACCTGCGCCGGGCAACTCCAGCGAATACAGAGACATATCTCACGCAGCAGCAAGACCAGGAGCACTGTCGACCAGCGTCCCATCAAGATCAAAAGCGACGCCGCGAATATCTTCAAACt                            >  7:295106/1‑149 (MQ=255)       cAATCCAGGTAATAACGCGTTCTTCACCTGCGACGGGCAACTCCAGCGCATACAGCGCCATATCTAACGCAGCAGCAAGACCAGGAGCACTGTCGACCAGCGTACCATCAAGATCAAAAGCGACGCCGCGAATATCTTCAAACTTAtt                        >  7:120094/1‑148 (MQ=255)        aaTCCAGGTAATAACGCGTTCTTCACCTGCGACGGGCAACTCCCGCGCATACAGCGCCATATCTACCGCAGCAGCAAGACGAGGAGCACTGTCGACCAGCGTACCATCAAGATCAAAAGCGACGCCGCGAATATCTTCAAACTTATTCa                      >  4:308555/1‑149 (MQ=255)        aaTCCAGGTAATAACGCGTTCTTCACCTGCGACGGGCAACTCCAGCGCATACAGCGCCATATCTACCGCAGCAGCAAGACCAGGAGCACTGTCGACCAGCGTACCATCAAGATCAAAAGCGACGCCGCGAATATCTTCAAACTTATTCa                      >  8:12895/1‑149 (MQ=255)             aGGTAATAACGCGTTCTTCACCTGCGACGGGCAACTCCAGCGCATACAGCGCCATATCTACCGCAGCAGCAAGACCAGGAGCACTGTCGACCAGCGTACCATCAAGATCAAAAGCGACGCCGCGAATATCTTCAAACTTATTCATGACt                 >  1:174815/1‑149 (MQ=255)              ggTAATAACGCGTTCTTCACCTGCGACGGGCAACTCCAGCGCATACAGCTCCATATCTACCGCAGCAGCAAGACCAGGAGCACTGTCGACCAGCGTACCATCAAGATCAAAAGCGACGCCGCGAATATCTTCAAACTTATTCATGACtt                <  6:41374/149‑1 (MQ=255)                   taaCGCGTTCTTCACCTGCGACGGGCAACTCCAGCGCATACAGCGCCATATCTACCGCAGCAGCAAGACCAGGAGCACTGTCGACCAGCGTACCATCAAGATCAAAAGCGACGCCGCGAATATCTTCAAACTTATTCATGACTTACCtt           >  1:419973/1‑149 (MQ=255)                     aCGCGTTCTTCACCTGCGACGGGCAACTCCAGCGCATACAGCGCCATATCTACCGCAGCAGCAAGACCAGGAGCACTGTCGACCAGCGTACCATCAAGATCAAAAGCGACGCCGCGAATATCTTCAAACTTATTCATGACTTACCttt          >  6:324738/1‑148 (MQ=255)                     aCGCGTTCTTCACCTGCGACGGGCAACTCCAGCGCATACAGCGCCATATCTACCGCAGCAGCAAGACCAGGAGCACTGTCGACCAGCGTACCATCAAGATCAAAAGCGACGCCGCGAATATCTTCAAACTTATTCATGACTTACCTTTg         >  8:47931/1‑149 (MQ=255)                     aCGCGTTCTTCACCTGCGACGGGCAACTCCAGCGCATACAGCGCCATATCTACCGCAGCAGCAAGACCAGGAGCACTGTCGACCAGCGTACCATCAAGATCAAAAGCGACGCAGCGAATATCTTCAAACTTATTCATGACTTACCTTTg         >  4:351100/1‑149 (MQ=255)                      cgcgTTCTTCACCTGCGACTGGCAACTCCAGCGCCTACAGCGCAATATCTACCGCATCAGCAAGACCAGGAGCACTGTCGCACAGCGTACAATCAAGAGCTAAAGCTCCGCCTCGAATATCTTCAAACTTATTCATGACTTAAATTTga        >  5:67337/1‑148 (MQ=255)                       gcgTTCTTCACCTGCGACGGGCAACTCCAGCGCATACAGCGCCATATCTACCGCAGCAGCAAGACCAGGAGCACTGTCGACCAGCGTACCATCAAGATCAAAAGCGACGCCGCGAATATCTTCAAACTTATTCATGACTTACCTTTGct       >  1:199885/1‑148 (MQ=255)                         gTTCTTCACCTGCGACGGGCAACTCCAGCGCATACAGCGCCATATCTACCGCAGCAGCAAGACCAGGAGCACTGTCGACCAGCGTACCATCAAGATCAAAAGCGACGCCGCGAATATCTTCAAACTTATTCATGACTTACCTTTg         >  2:292939/1‑145 (MQ=255)                         gTTCTTCACCTGCGACGGGCAACTCCAGCGCATACAGCGCCATATCTACCGCAGCAGCAAGACCAGGAGCACTGTCGACCAGCGTACCATCAAGATCAAAAGCGACGCCGCGAATATCTTCAAACTTATTCATGACTTACCTTTg         <  1:292939/145‑1 (MQ=255)                          ttcttcACCTGCGACGGGCATCTCCAGCGCATACAGCGCCATATCTACCGCAGCAGCAAGCCCAGCAGCACTGTCGACCAGCGTACCATCAAGCTCAAAAGCGCCGCCGCCAATATCTTCAAACTTATTCATGACTTACCGTTGctgta    >  6:79855/1‑145 (MQ=255)                          ttcttcACCTGCGACGGGCAACTCCAGCGCATACAGCGCCATATCTACCGCAGCAGCAAGACCAGGAGCACTGTCGACCAGCGTACCATCAAGATCAAAAGCGACGCCGCGAATATCTTCAAACTTATTCATGACTTACCTTTGctgta    <  8:95743/149‑5 (MQ=255)                           tcttcACCTGCGACGGGCAACTCCAGCGCATACAGCGCCATATCTACCGCAGCAGCAAGACCAGGAGCACTGTCGACCAGCGTACCATCAAGATCAAAAGCGACGCCGCGAATATCTTCAAACTTATTCATGACTTACCTTTGctgta    <  5:79855/148‑5 (MQ=255)                               cACCTGCGACGGGCAACTCCAGCGCATACAGCGCCATATCTACCGCAGCAGCAAGACCAGGAGCACTGTCGACCAGCGTACCATCAAGATCAAAAGCGACGCCGCGAATATCTTCAAACTTATTCATGACTTACCTTTGctgtagg  <  2:283730/146‑7 (MQ=255)                                     cGACGGGCAACTCCAGCGCATACAGCGCCATATCTACCGCAGCAGCAAGACCAGGAGCACTGTCGACCAGCGTACCATCAAGATCAAAAGCGACGCCGCGAATATCTTCAAACTTATTCATGa                   >  5:304014/1‑123 (MQ=255)                                     cGACGGGCAACTCCAGCGCATAAAGCGCCATATCTACCGCAGAAGAAAGACCAGGAGCACTGTCGACCAGCGTACCATCAAGATCAAAAGCGACGCCGCGAATATCTTCAAACTTATTCATGa                   <  6:304014/123‑1 (MQ=255)                                               cTCCAGCGCATACAGCGCCATATCTACCGCAGCAGCAAGACCAGGAGCACTGTCGACCAGCGTACCATCAAGATCAAAAGCGACGCCGCGAATATCTTCAAACTTa                          <  4:43519/106‑1 (MQ=255)                                               cTCCAGCGCATACAGCGCCATATCTACCGCAGCAGCAAGACCAGGAGCACTGTCGACCAGCGTACCATCAAGATCAAAAGCGACGCCGCGAATATCTTCAAACTTa                          >  3:43519/1‑106 (MQ=255)                                                          aCAGCGCCATATCTACCGCAGCAGCAAGACCAGGAGCACTGTCGACCAGCGTACCATCAAGATCAAAAGCGACGCCGCGAATATCTTCaaa                              <  2:123272/91‑1 (MQ=255)                                                          aCAGCGCCATATCTACCGCAGCAGCAAGACCAGGAGCACTGTCGACCAGCGTACCATCAAGATCAAAAGCGACGCCGCGAATATCTTCaaa                              >  1:123272/1‑91 (MQ=255)                                                           cAGCGCCATATCTACCGCAGCAGCAAGACTAGGAGCAGTGTCGACCAGCGTACCATCAAGATCAAAAGCGACGCCGCGAATATCTTCATACTTATTCa                      <  5:125161/98‑1 (MQ=255)                                                           cAGCGCCATATCTACCGCAGCAGCAAGACAAGGAGCACTGTCGACCAGCGTACCATCAAGATCAAAAGAGACGCCGCGAATAACTTCAAACTTATTCa                      >  6:125161/1‑98 (MQ=255)                                                                   tatCTACCGCAGCAGCAAGACCAGGAGCACTGTCGACCAGCGTACCATCAAGATCAAAAGCGACGCCGCGAATATCTTCAAACTTATTc                       <  1:139453/89‑1 (MQ=255)                                                                   tatCTACCGCAGCACCAAGACCAGGAGCACTGTCGACCAGCGTACCATCAAGATCAAAAGCGACGCCGCGAATATCTTCAAACTTATTc                       >  2:139453/1‑89 (MQ=255)                                                                                          ggAGCACTGTCGACCAGCGTACCATCAAGATCAAAAGCGACGCCGCGAATATCTTCAAACTTATTCATGACTTACCTTTGc        <  7:384055/81‑1 (MQ=255)                                                                                          ggAGCACTGTCGACCAGCGTACCATCAAGATCAAAAGCGACGCCGCGAATATCTTCAAACTTATTCATGACTTACCTTTGc        >  8:384055/1‑81 (MQ=255)                                                                                                                                                    |                             CGTTACCAATCCAGGTAATAACGCGTTCTTCACCTGCGACGGGCAACTCCAGCGCATACAGCGCCATATCTACCGCAGCAGCAAGACCAGGAGCACTGTCGACCAGCGTACCATCAAGATCAAAAGCGACGCCGCGAATATCTTCAAACTTATTCATGACTTACCTTTGCCAGTTC  >  NC_000913/3514233‑3514408

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑