BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3800403	161 (1.790)	4 (0.050)	4/238	NT	2.5%	coding (563/699 nt)	waaY	lipopolysaccharide core biosynthesis protein
*	?	NC_000913	= 3800415	152 (1.750)	4 (0.050)	4/238	NT	2.5%	coding (551/699 nt)	waaY	lipopolysaccharide core biosynthesis protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 181 total aligned reads displayed.

TGGGATTTTTTTTAGCGCGCTGGTTTCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGAATTTTATTTTTTAGCG  >  NC_000913/3800256‑3800550

tgGGATTTTTTTTAGCGCGCTGGTTTCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTT                                                                                                                                                     >  2:218690‑M1/1‑148 (MQ=255)

   gATTTTTTTTAGCGCGCTGGTTTCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATATCGTAATGACGCTCTAAGTCAATACCATCTTTCGCTTTAc                                                                                                                                                  >  7:38901/1‑148 (MQ=255)

   gATTTTTTTTAGCGCGCTGGTTTCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTAc                                                                                                                                                  >  4:90890/1‑148 (MQ=255)

      tttttttAGCGCGCTGGTTTCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTAcgct                                                                                                                                               >  6:196654/1‑148 (MQ=255)

      tttttttAGCGCGCTGGTTTCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTAcgct                                                                                                                                               >  7:336905/1‑148 (MQ=255)

         ttttAGCGCGCTGGTTTCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTAcgctgcg                                                                                                                                            >  6:84762/1‑148 (MQ=255)

            tAGCGCGCTGGTTTCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTAcgctgcgct                                                                                                                                          <  4:84964/147‑1 (MQ=255)

              gggggcttgtTTACCTTTCAAAAGGCGCATTAAATTTCTCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGa                                                                                                                                        >  6:278251‑M2/5‑146 (MQ=255)

              gcgcgcTGGTTTCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTAcgctgcgctg                                                                                                                                         >  1:246181/1‑146 (MQ=255)

                 cgcTGGTTTCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCa                                                                                                                                    <  5:91111/148‑1 (MQ=255)

                   cTGGTTTCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACg                                                                                                                                  >  7:134444/1‑148 (MQ=255)

                      gTTTCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCtt                                                                                                                               >  6:100804/1‑148 (MQ=255)

                         tCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTTCGCTGAAGCACGCTTTc                                                                                                                             <  2:295480/147‑1 (MQ=255)

                         tCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTcc                                                                                                                            >  1:419036/1‑148 (MQ=255)

                            cTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGga                                                                                                                         <  5:230253/148‑1 (MQ=255)

                             tttCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCg                                                                                                                           >  4:20639/1‑145 (MQ=255)

                              ttCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTcagcgcagcgtaaagcgaaagatcgtatt                                                                                                                        >  1:72866‑M1/1‑118 (MQ=255)

                              ttCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGga                                                                                                                         >  1:361280/1‑146 (MQ=255)

                              ttCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGga                                                                                                                         >  1:350597/1‑146 (MQ=255)

                                cAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGga                                                                                                                         >  6:271644/1‑144 (MQ=255)

                                        gcATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAAt                                                                                                             >  7:71900/1‑148 (MQ=255)

                                        gcATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGATGAAGCACGCTTTCCGGAGAGATCGATAAt                                                                                                             >  3:245896/1‑148 (MQ=255)

                                            aaaaTTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCg                                                                                                          >  1:130228/1‑147 (MQ=255)

                                                ttGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCt                                                                                                     <  3:243622/148‑1 (MQ=255)

                                                  gcgcATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTc                                                                                                    <  2:350597/147‑1 (MQ=255)

                                                  gagaaTTTTTTTACGATATACTAAAAGATAATAGCCTATATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTc                                                                                                    <  5:326547/143‑1 (MQ=255)

                                                    gcATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCttt                                                                                                                              <  2:216673/119‑1 (MQ=255)

                                                    gcATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCttt                                                                                                                              >  1:216673/1‑119 (MQ=255)

                                                            ttACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCAtttttt                                                                                          <  5:182276/147‑1 (MQ=255)

                                                                  tataCTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGa                                                                                   <  7:192403/148‑1 (MQ=255)

                                                                  tataCTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGa                                                                                   <  8:147588/148‑1 (MQ=255)

                                                                  tataCTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGa                                                                                   <  8:336905/148‑1 (MQ=255)

                                                                  tataCTAAAACATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGa                                                                                   <  3:46590/148‑1 (MQ=255)

                                                                    taCTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAg                                                                                 <  7:417067/148‑1 (MQ=255)

                                                                        aaaaGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTAc                                                                             >  3:348852/1‑148 (MQ=255)

                                                                        aaaaGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTAc                                                                             >  4:291834/1‑148 (MQ=255)

                                                                          aaGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCa                                                                           <  2:58702/148‑1 (MQ=255)

                                                                          aaGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCa                                                                           >  5:303728/1‑148 (MQ=255)

                                                                            gATAATCGCCTAGATATCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATATGATCTATCGCTTTACGCTGCGCTGAAGCACGCTTTCAGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACg                                                                         <  3:322974/148‑1 (MQ=255)

                                                                            gATAATAGCCTAGATCTCTAATCTTATTTTTAATACAGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACg                                                                         <  7:309150/148‑1 (MQ=255)

                                                                            gATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACTCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACg                                                                         <  7:88574/148‑1 (MQ=255)

                                                                            gATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACg                                                                         <  4:377244/148‑1 (MQ=255)

                                                                              taataGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGAt                                                                       <  6:406700/148‑1 (MQ=255)

                                                                                ataGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATgg                                                                     <  2:419036/148‑1 (MQ=255)

                                                                                ataGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATgg                                                                     >  8:297293/1‑148 (MQ=255)

                                                                                 taGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATggg                                                                    <  5:203254/148‑1 (MQ=255)

                                                                                   gCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATggggg                                                                  <  1:172440/148‑1 (MQ=255)

                                                                                    ccTAGATCTATAATCTCATTTTTAATACCTTAATGAATCTCTAATTCAATACGATATTTAGCTTTACGCTGAGCTGAAGAACGCTTTCCGGAGAGATCGATAATTCTAAACTCACCATTTTTTATAATGAATTTACAAAGATtggttt                                                                 >  4:258085/1‑145 (MQ=255)

                                                                                       aGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGc                                                              >  2:129518/1‑148 (MQ=255)

                                                                                        gATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGc                                                                                                                                 <  2:161638/80‑1 (MQ=255)

                                                                                          tctcTAATCTCATTTTTAATACCGTAATGACGCTCTAAGACAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTAGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGc                                                              >  8:438740/1‑145 (MQ=255)

                                                                                             ctAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTAcgctgcgct                                                                                                                                          <  1:243536/66‑1 (MQ=255)

                                                                                             ctAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGtt                                                                               >  1:426821/1‑125 (MQ=255)

                                                                                             ctAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGtt                                                                               <  2:426821/125‑1 (MQ=255)

                                                                                             ctAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGaaa                                                        >  4:337408/1‑148 (MQ=255)

                                                                                             ctAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCAGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACAACGATGGGGGTCGCCAGaaa                                                        >  4:6937/1‑148 (MQ=255)

                                                                                                aTCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGTACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAcca                                                     <  8:127632/148‑1 (MQ=255)

                                                                                                aTCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGaaa                                                        <  2:361280/145‑1 (MQ=255)

                                                                                                aTCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAcc                                                      <  4:46130/147‑1 (MQ=255)

                                                                                                aTCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAcc                                                      <  7:297293/147‑1 (MQ=255)

                                                                                                aTCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAcc                                                      <  3:406755/147‑1 (MQ=255)

                                                                                                aTCTCATTTTTAATACCGTAATGAAGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATATTGAAGTTACCACGATGGGGGTCGCCAGAAAcca                                                     <  8:121325/148‑1 (MQ=255)

                                                                                                 tctcATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAccat                                                    >  1:74240/1‑148 (MQ=255)

                                                                                                 tctcATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAcca                                                     <  1:129518/147‑1 (MQ=255)

                                                                                                  ctcATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGgag                                                                                                                        <  4:111086/79‑1 (MQ=255)

                                                                                                  ctcATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGt                                                                 >  3:172563/1‑134 (MQ=255)

                                                                                                  ctcATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAccatg                                                   >  2:94957/1‑148 (MQ=255)

                                                                                                   tcATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGaa                                                                                  <  1:393973/116‑1 (MQ=255)

                                                                                                    cATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACAATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAccatgc                                                  >  6:319025/1‑147 (MQ=255)

                                                                                                    cATTTATAATACCTTAATGACGCTCTAAGTCAATACGAACTTTCGCTTTACTATTAGCTGAACCACGCTTTACTGAGAGATAGATAATTCGAACATCACAATTTTTTATAATAAAg                                                                                 >  2:393973/1‑116 (MQ=255)

                                                                                                      tttttAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAccatgccat                                               <  3:189518/148‑1 (MQ=255)

                                                                                                       ttttAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGaagcgaaagatcgtattgacttagagcgtcattacggtattaaaaatgagattagagatctaggctattatcttttagtatatcgtaaaa                                               <  2:72866‑M2/147‑91 (MQ=255)

                                                                                                       ttttAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAccatgccatg                                              >  7:191222/1‑148 (MQ=255)

                                                                                                       ttttAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAccatgccatg                                              >  1:151925/1‑148 (MQ=255)

                                                                                                         ttAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGtt                                            >  6:36487/1‑148 (MQ=255)

                                                                                                           aaTACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTg                                           <  8:323300/147‑1 (MQ=255)

                                                                                                                cGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTaa                                     <  4:348852/148‑1 (MQ=255)

                                                                                                                 gTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGa                                                                                                         >  7:244292/1‑79 (MQ=255)

                                                                                                                 gTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAg                                    >  3:390519/1‑148 (MQ=255)

                                                                                                                      gACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCAt                                >  5:421102/1‑147 (MQ=255)

                                                                                                                            ctAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAattga                         >  8:398314/1‑148 (MQ=255)

                                                                                                                             tAAGTCAATACTATCTTTCGCTTTACGCTGAGCTGAAGCACGCTTTACGGAGAGATCGATAATTCGAACCTCACCAttttt                                                                                           >  2:141190/1‑81 (MQ=255)

                                                                                                                             tAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATTAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAattgat                        >  2:200596/1‑148 (MQ=255)

                                                                                                                              aaGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGaa                                                                                                        >  4:1283/1‑67 (MQ=255)

                                                                                                                              aaGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGa                                                                                                         <  7:350568/66‑1 (MQ=255)

                                                                                                                                  cAATACGATCTTTCGCTTTACGCTGCGCTGaagcgaaagatcgtattgacttagagcgtcattacggtattaaaaatgagattagagatctaggctattatcttttagtatatcgtaaaaaa                                             <  3:296111‑M2/122‑93 (MQ=255)

                                                                                                                                  cAATACGATCTTTCGCTTTACGCTGCGCTGaagcgaaagatcgtattgacttagagcgtcattacggtattaaaaatgagattagagatctaggctattatcttttagtatatcgtaaaaaa                                             >  4:296111‑M2/1‑30 (MQ=255)

                                                                                                                                  cAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCa                                 <  3:259031/134‑1 (MQ=255)

                                                                                                                                   aaTACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGa                  <  5:84762/148‑1 (MQ=255)

                                                                                                                                      aCGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAcc                                                      <  8:199224/109‑1 (MQ=255)

                                                                                                                                      aCGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGAatt               >  2:342016/1‑148 (MQ=255)

                                                                                                                                      aCGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGAatt               >  1:443704/1‑148 (MQ=255)

                                                                                                                                       cGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGAattt              >  5:399552/1‑148 (MQ=255)

                                                                                                                                         aTCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGAatttta            >  1:322256/1‑148 (MQ=255)

                                                                                                                                             ttCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAAcc                                                                                                      >  8:66659/1‑54 (MQ=255)

                                                                                                                                              tCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGAattttatt          <  4:173631/145‑1 (MQ=255)

                                                                                                                                              tCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGAatttta            <  3:112208/143‑1 (MQ=255)

                                                                                                                                                gCTTcagcgcagcgtaaagcgaaagatcgtattgacttagagcgtcattacggtattaaaaatgagattagagatctaggctattatcttttagtatatcgtaaaaaaatgcgcaattttatgcggcgtttgaaagggaaaccagcgc     >  8:14116‑M1/1‑4 (MQ=255)

                                                                                                                                                gCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGAATTTTAtttttt      <  1:94957/147‑1 (MQ=255)

                                                                                                                                                   ttACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCAATTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGAATTAATTGAATGCTGAATTTTATTTTTTAgcg  >  5:111088/1‑148 (MQ=255)

TGGGATTTTTTTTAGCGCGCTGGTTTCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGAATTTTATTTTTTAGCG  >  NC_000913/3800256‑3800550

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.