BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4188485	96 (0.870)	49 (0.450)	39/274	1.6	34.7%	coding (3136/4224 nt)	rpoC	RNA polymerase, beta prime subunit
*	?	NC_000913	4188498 =	89 (0.810)	49 (0.450)	39/274	1.6	34.7%	coding (3149/4224 nt)	rpoC	RNA polymerase, beta prime subunit

Only 100 of 139 total aligned reads displayed.

TGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAGCGCAGTA  >  NC_000913/4188357‑4188645

tGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGaa                                                                                                                                              >  5:263132/1‑149 (MQ=255)

acggtgcggtactggcgaaaggcgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccaCcgacg                                                                                                                                                <  2:351172‑M2/6‑1 (MQ=255)

  gCGAAAGGCGATGGCGAACTGGATGCTGGCGGCGAAACCTTTTCAAACTGGGACCCGCACTCCATGCCGTTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGaa                                                                                                                                              <  2:363722/147‑1 (MQ=255)

  gCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAAc                                                                                                                                             <  6:101124/148‑1 (MQ=255)

  gCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACt                                                                                                                                            >  2:64067/1‑149 (MQ=255)

  gCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACt                                                                                                                                            >  2:219309/1‑149 (MQ=255)

    gAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACt                                                                                                                                            <  4:283300/147‑1 (MQ=255)

    gAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGa                                                                                                                                          >  3:362878/1‑149 (MQ=255)

     aaaGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGAc                                                                                                                                         <  1:407447/149‑1 (MQ=255)

       ggtactggcgaaaggcgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccaCCGACGAACTGACCg                                                                                                                                       <  3:286066‑M2/15‑1 (MQ=255)

       aGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCAGTACGCGTCAGACCGACGAACTGACCg                                                                                                                                       <  6:178770/149‑1 (MQ=255)

        gtactggcgaaaggcgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccaCCGACGAACTGACCgg                                                                                                                                      >  2:435536‑M2/134‑149 (MQ=255)

           gATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGgtct                                                                                                                                   <  5:274068/149‑1 (MQ=255)

                gaaaggcgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccaCCGACGAACTGACCGgtct                                                                                                                                   >  3:203957‑M2/126‑144 (MQ=255)

                  aaggcgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccaCCGACGAACTGACCGGTCTGTCTTCg                                                                                                                            <  1:417411‑M2/26‑1 (MQ=255)

                   aggcgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccaCCGACGAACTGACCGGTCTGTCTTCGc                                                                                                                           >  6:334891‑M2/123‑149 (MQ=255)

                   aggcgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccaCCGACGAACTGACCGGTCTGTCTTCGc                                                                                                                           >  7:170469‑M2/123‑149 (MQ=255)

                      cgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctctactgacatgatcgacggccagaccaCCGACGAACTGACCGGTCTGTCTTCGCtgg                                                                                                                        <  4:67325‑M2/30‑1 (MQ=255)

                       gTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCtggt                                                                                                                       <  7:118696/149‑1 (MQ=255)

                        ttGCTGGCGGCGAAACCGGTGAAAACTGGGACCCGCACACCATGCCTGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTAATGACATGATCGACGGCCAGACCATTACTCGTCAGACCGACGAACTGACAGGTCTGTCTTCGAtgttg                                                                                                                      <  2:295263/149‑1 (MQ=255)

                            tGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTc                                                                                                                  >  4:384425/1‑149 (MQ=255)

                              gcggcgAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTc                                                                                                                  <  8:70485/147‑1 (MQ=255)

                              gcggcgAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCt                                                                                                                 <  1:64067/148‑1 (MQ=255)

                              gcggcgAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTg                                                                                                                <  3:223972/149‑1 (MQ=255)

                              aacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccaCCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTg                                                                                                                <  1:67739‑M2/38‑1 (MQ=255)

                                  cgAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGAtt                                                                                                            <  4:362878/149‑1 (MQ=255)

                                  cgAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGAtt                                                                                                            <  1:219309/149‑1 (MQ=255)

                                  cgAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGAtt                                                                                                            <  8:10882/149‑1 (MQ=255)

                                   gttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccaCCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTc                                                                                                           >  4:9622‑M2/107‑149 (MQ=255)

                                     aaCCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTcc                                                                                                          <  5:272633/148‑1 (MQ=255)

                                       ccGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCg                                                                                                         >  2:261332/1‑147 (MQ=255)

                                         gTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAg                                                                                                      >  7:170443/1‑148 (MQ=255)

                                           cggcgaaaccgttgaaaacttggacccgcacaccatgccggtaatcacagaagtaagcggttttgtacgctttactgacatgatcgacggccagaccaCAGACGAACTGACCGGTCTGTCTTCGCTGGTGTTTCTGGATTCCGCAGaa                                                                                                    <  5:210139‑M2/50‑1 (MQ=255)

                                                aCTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTAcc                                                                                              <  2:319990/149‑1 (MQ=255)

                                                    ggACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAg                                                                                          >  1:300074/1‑149 (MQ=255)

                                                    ggACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAg                                                                                          <  7:241862/149‑1 (MQ=255)

                                                      aCCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAggt                                                                                        >  1:38473/1‑149 (MQ=255)

                                                         caaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccaCCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAggtgg                                                                                      <  5:334891‑M2/64‑1 (MQ=255)

                                                         cGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAggtggt                                                                                     <  1:225820/149‑1 (MQ=255)

                                                         cGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAggtgg                                                                                      >  5:84879/1‑148 (MQ=255)

                                                          gCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCGGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCt                                                                                                                 >  8:413647/1‑120 (MQ=255)

                                                             ctgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgagatgatcgacggccagacgaCCGACGAACTGTCCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGgtaatg                                                                                 <  4:320595‑M2/69‑3 (MQ=255)

                                                             ctgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccaCCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAg                                                                                 <  3:9622‑M2/69‑1 (MQ=255)

                                                              acCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTa                                                                                    >  3:436994/1‑145 (MQ=255)

                                                               ccATGCCGGTTATCACCGAAGTAAGCGGTTATGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCt                                                                                                                 <  3:79234/115‑1 (MQ=255)

                                                                ggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccaCCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATc                                                                              >  2:1532‑M2/78‑149 (MQ=255)

                                                                cATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATc                                                                              >  8:117245/1‑149 (MQ=255)

                                                                   gCCGGGTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAgg                                                                                         >  7:315331/1‑135 (MQ=255)

                                                                   gCCGGCTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAgg                                                                                         <  8:315331/135‑1 (MQ=255)

                                                                   cccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccaCCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGc                                                                           <  8:170469‑M2/75‑1 (MQ=255)

                                                                      ggTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTc                                                                        <  8:170443/149‑1 (MQ=255)

                                                                      gcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccaCCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTc                                                                        >  6:329813‑M2/72‑149 (MQ=255)

                                                                       gTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTcc                                                                       <  2:331266/149‑1 (MQ=255)

                                                                          accatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccaCCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCgg                                                                     >  6:124884‑M2/68‑148 (MQ=255)

                                                                           tCACCGAAGTAACGGGGTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATAACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCa                                                                   <  6:124389/149‑1 (MQ=255)

                                                                             atgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccaCCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACt                                                                 >  4:276288‑M2/65‑149 (MQ=255)

                                                                             atgccggttatcaccgaagtaagcggtttagtacgctttactgacatgatcgacggccagaccaCCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACt                                                                 >  7:349967‑M2/65‑149 (MQ=255)

                                                                             aCCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGCCGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGTATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGTCACt                                                                 >  5:355698/1‑149 (MQ=255)

                                                                             aCCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACt                                                                 >  7:424089/1‑149 (MQ=255)

                                                                               gccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccaCCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCt                                                                                                                 <  5:157743‑M2/37‑1 (MQ=255)

                                                                               gccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagacaaCCGACGACCTGACCGGTCTGTCTTCGATGGTGGTTCt                                                                                                                 >  6:157743‑M2/63‑99 (MQ=255)

                                                                               gccggttatcaccgaagtaagcggttttggccgctttactgacatgatcgacggccagaccaCCGCCGCACTGACCGGGCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTg                                                                >  1:377036‑M2/63‑148 (MQ=255)

                                                                                  ggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccaCCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGaaaa                                                            <  3:276288‑M2/90‑1 (MQ=255)

                                                                                  aGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGaaaa                                                            <  6:45332/149‑1 (MQ=255)

                                                                                      aGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTc                                                                                                           <  7:117305/98‑1 (MQ=255)

                                                                                      aGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTc                                                                                                           >  8:117305/1‑98 (MQ=255)

                                                                                       gCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGtt                                                       <  7:117245/149‑1 (MQ=255)

                                                                                         accgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccaCCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGa                                                     <  6:428521‑M2/97‑1 (MQ=255)

                                                                                          gTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATc                                                          <  3:432385/143‑1 (MQ=255)

                                                                                          gTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATc                                                          >  4:432385/1‑143 (MQ=255)

                                                                                          ccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccaCCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGAt                                                    >  5:192998‑M2/52‑149 (MQ=255)

                                                                                           cgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccaCCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATg                                                   >  6:365623‑M2/51‑149 (MQ=255)

                                                                                               gtaagcggtttcgtacgctttactgacatgatcgacggccagaccaCCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCa                                               <  8:349967‑M2/103‑1 (MQ=255)

                                                                                               gTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGAt                                                                               <  4:73929/117‑1 (MQ=255)

                                                                                               gTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGAt                                                                               >  3:73929/1‑117 (MQ=255)

                                                                                                taagcggttttgtacgctttactgacatgatcgacggccagaccaCCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAg                                              >  5:199467‑M2/46‑149 (MQ=255)

                                                                                                tACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGCCCGGCACTGAAAATCGTTGATGCTCAg                                              >  1:321972/1‑149 (MQ=255)

                                                                                                  agcggttttgtacgctttactgacatgatcgacggccagaccaCCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAggg                                            <  6:199467‑M2/106‑1 (MQ=255)

                                                                                                  agcggttttgtacgctttactgacatgatcgacggccagaccaCCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAggg                                            >  1:416651‑M2/44‑149 (MQ=255)

                                                                                                    cTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAggtg                                                                                       <  6:173791/104‑1 (MQ=255)

                                                                                                    cTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAggtg                                                                                       >  5:173791/1‑104 (MQ=255)

                                                                                                          tGACATGATCTACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAacgacg                                    >  2:450535/1‑149 (MQ=255)

                                                                                                            aCATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGtt                                  >  3:171530/1‑149 (MQ=255)

                                                                                                             cATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGtt                                  >  5:385576/1‑148 (MQ=255)

                                                                                                              cgctttactgacatgatcgacggccagaccaCCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTc                                 <  5:329813‑M2/117‑1 (MQ=255)

                                                                                                              aTGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTaa                                         >  6:60358/1‑140 (MQ=255)

                                                                                                              aTGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTaa                                         <  5:60358/140‑1 (MQ=255)

                                                                                                                 aTCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGGCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGa                              <  6:263132/148‑1 (MQ=255)

                                                                                                                  tCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATc                            >  2:12199/1‑149 (MQ=255)

                                                                                                                   tactgacatgatcgacggccagaccaCCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATc                            <  2:416651‑M2/122‑1 (MQ=255)

                                                                                                                    gACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATccc                          <  2:38473/149‑1 (MQ=255)

                                                                                                                     ctgacatgatcgacggccagaccaCCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCa                         <  7:44969‑M2/125‑1 (MQ=255)

                                                                                                                     ctgacatgatcgacggccagaccaCCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGGACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATccc                          <  5:365623‑M2/124‑1 (MQ=255)

                                                                                                                        acatgatcgacggccagaccaCCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTTAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAgg                       >  6:409431‑M2/22‑148 (MQ=255)

                                                                                                                        acatgatcgacggccagaccaCCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAgg                       <  1:1532‑M2/127‑1 (MQ=255)

                                                                                                                         ccAGACCATTACGCGTCAGACAGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTa                     >  8:459193/1‑149 (MQ=255)

                                                                                                                           aGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGt                                                                         <  5:122395/95‑1 (MQ=255)

                                                                                                                               cATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGata               >  6:48788/1‑149 (MQ=255)

                                                                                                                                           caCCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAGCGCAg    >  1:242463‑M2/3‑148 (MQ=255)

                                                                                                                                            aCCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAGCGCAGTa  >  3:325941‑M2/2‑149 (MQ=255)

TGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAGCGCAGTA  >  NC_000913/4188357‑4188645

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.