New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1207790 =	14 (0.260)	20 (0.400)	16/480	1.8	59.6%	coding (290/630 nt)	stfP	e14 prophage; uncharacterized protein
	?	NC_000913	1209619 =	14 (0.280)					pseudogene (1/501 nt)	stfE	pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

AAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTG‑GTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGGGG  >  NC_000913/1207519‑1208048                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                   aaaaCCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTG‑GTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCCAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTG                                                                                                                                                                                                                                                                  >  2:282138‑M1/1‑274 (MQ=255) aaaaCCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTG‑GTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCACATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTG                                                                                                                                                                                                                                                                  >  1:346071‑M1/1‑274 (MQ=255) aaaaCCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTG‑GTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTG                                                                                                                                                                                                                                                                  >  1:439933‑M1/1‑274 (MQ=255) aaaaCCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTG‑GTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGAACTGTGCAAACGGCTCTCGAAAACCTTG                                                                                                                                                                                                                                                                  >  1:156372‑M1/1‑274 (MQ=255)           gccgagccagcttccatacaaccagagtgtaaccgtccgataatgtccttagcagttttttcagtcccggcctttcggactttgtgccgcttatcttttcttcaaaaatcagctcgcatccggcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttaatacgcttacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGgaga                                                                                                                                                                                                                                                        >  2:74024‑M1/263‑275 (MQ=255)             aaGGATAAGTTCGGCGCGGGTAAGAACGTTTTTTCCCGTG‑GTAACCCCCAGACCGGCACGCCGGCCACGGATCTGGATGCTGACTACTTTGACATGTTGCAGGCGGAACTGTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGTAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGG                                                                                                                                                                                                                                                     <  1:401358‑M1/275‑1 (MQ=255)                tccagcttccagacaaccagagtgtcacctgccgataatgtcctgagcagttttttcagtcccggcctttcggactttgtgccgcttatcttgtcttcaaaaatcagctcgcatcctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAg                                                                                                                                                                                                                                                   >  2:308032‑M1/258‑275 (MQ=255)                 aTAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTG‑GTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCa                                                                                                                                                                                                                                                 <  1:172962/275‑1 (MQ=255)                      ttCGGCTCTGGTAAGAACGGTTTTA‑CCGTGTGTAACCCCCAGCCCGGCACGCCTGCCACCGATTTGGATGATGACTACTTTGACAGGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACt                                                                                                                                                                                                                                            <  1:6473/275‑1 (MQ=255)                       tCGGCGCGGGTAAGAACGGTTTTACCCGTG‑GTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAG                                                                                                                                                                                                                                                         >  1:168295‑M1/1‑261 (MQ=255)                           cgcgGGTAAGAACGGTTTTACCCGTG‑GTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGG                                                                                                                                                                                                                                                     <  2:168295‑M1/261‑1 (MQ=255)                                     gtttcacctgccgataatgtccttatcagttttttcagtcccggccgttcggactttgtgccgcttatcttgtcttcaaaaatcagctcgcatcctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACgg                                                                                                                                                                                                                              >  2:465326‑M1/237‑275 (MQ=255)                                     gtgtcacctgccgataaggtccttagcagttttttccgtcccggcctttcggactttgtgccgcttagcttgtcttcaaaaatcagctcgcatcctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTCTGGGAGAAGGAGCAAAACTCAATGCAGCAACgg                                                                                                                                                                                                                              >  2:113268‑M1/237‑275 (MQ=255)                                     ggttagcctgccgataatgtcctgaggagttttttcagtcccggcctttcggactttgtgccgcttatcttggcttcaaaaatcagctcgcatcctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACgg                                                                                                                                                                                                                              >  2:134392‑M1/237‑275 (MQ=255)                                       cGGTGTTACCCGTG‑GTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccgg                                                                                                                                                                                                                           <  1:171370‑M1/275‑27 (MQ=255)                                          ttttACCCGTG‑GTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattaactgttggtgtcccggttc                                                                                                                                                                                                                        >  1:169261‑M1/1‑246 (MQ=255)                                                    g‑gTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcctt                                                                                                                                                                                                               >  1:123933‑M1/1‑236 (MQ=255)                                                      gTAACCCCCAGACCGGAACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGAGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCAcc                                                                                                                                                                                                             <  2:180166/275‑1 (MQ=255)                                                             ccAGACCGGGAGGGCTGCAACCGAGCTGGATGATGACTTCGTTGCCCTGTTGCAGGAGTAACTTTGCAGCGTTGTGTAGGCATCCGGTGCAATCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGAAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactc                                                                                                                                                                                                      <  1:489920‑M1/275‑48 (MQ=255)                                                             agcagttttttcagtcccggcctttcggactttgtgccgcttatcttgtcttcaaaaatcagctcgcatcctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttctttcttccttttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCAACATTAGGACGCCCAGGTTTCa                                                                                                                                                                                                      <  2:437251‑M1/63‑1 (MQ=255)                                                             agcagttttttcagtcccggcctttcggactttgtgccgcttatcttgtcttcaaaaatcagctcgcatcctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCa                                                                                                                                                                                                      <  2:160819‑M1/63‑1 (MQ=255)                                                                  ttttttcagtcccggcctttcggactttgtgccgcttatcttgtcttcaaaaatcagctcgcatcctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGACACCTTAGGACGCACCGGTTTCATAGCt                                                                                                                                                                                                 <  2:317‑M1/68‑1 (MQ=255)                                                                       aCGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacagg                                                                                                                                                                                            <  2:451804‑M1/275‑58 (MQ=255)                                                                              ccACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctg                                                                                                                                                                                     <  1:47212‑M1/275‑65 (MQ=255)                                                                                aCCGATCTGGAGGATGACTACTTTGACATGGTGCAGGAGGAACGTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctg                                                                                                                                                                                     <  2:156372‑M1/273‑65 (MQ=255)                                                                                 cctttcggactttgtgccgctgatcttgtcttcaaaaatcagctcgcatcctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAt                                                                                                                                                                                   >  2:168976‑M1/193‑274 (MQ=255)                                                                                             atgaCTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgcc                                                                                                                                                                      <  1:282138‑M1/275‑80 (MQ=255)                                                                                              tgaCTACTTTGACATGTTGCAGGAGGAACTTTGCAACGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGCTGGCACTGTGCAAACGGCTCTCGACAACCGTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAg                                                                                                                                                                      >  1:361107/1‑274 (MQ=255)                                                                                                  cgcatatcttgtcttcaaaaatcagcgtgcaacctggacagttcagcgcattacgttgaagatctgttgtctggtcatttgttgatacggggacatagccaataagcatgttaaatcccccaggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATc                                                                                                                                                                 >  1:191539‑M1/176‑275 (MQ=255)                                                                                                                               cAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCCAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtccctgttccgtggcattcagccactccgccaacaggctggctgacatgccatcgtgccgctttttccgctgtacactacccggacctggcaa                                                                                                                                    >  2:294028‑M1/1‑162 (MQ=255)                                                                                                                                  cctggacagttgcgcgccttacgttgtagatctgtgttctggtgcattgttgataaccgtcacgagccaataagcaggttaaatccccctgggaaaagcaggaatgatgccagttgcttgttattgcttcatgttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaa                                                                                                                                 >  2:95000‑M1/144‑275 (MQ=255)                                                                                                                                  cGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAATGGGCGGCACGACGAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaccaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggaacagg                                                                                                                                 >  1:126559‑M1/1‑159 (MQ=255)                                                                                                                                    tggtggAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaaaa                                                                                                                               >  2:341666/1‑275 (MQ=255)                                                                                                                                    tggtggAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaaaa                                                                                                                               >  1:297784/1‑275 (MQ=255)                                                                                                                                            gCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGAGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGAAAACGGCCCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctg                                                                                                                                                                                         >  1:210201‑M1/1‑149 (MQ=255)                                                                                                                                              aTCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttatgctgaagaatacccggaactggcaaaggcttatccgacaa                                                                                                                     >  1:493956‑M1/1‑147 (MQ=255)                                                                                                                                               tCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCctc                                                                                                                    >  1:296265/1‑275 (MQ=255)                                                                                                                                                ccGGTGCCAGCCGGGGGAAGGGGGGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctg                                                                                                                                                                                     <  2:210201‑M1/209‑65 (MQ=255)                                                                                                                                                    tGCCAGCTTGGAGAAGGGGCGCAACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaa                                                                                                                <  2:315810‑M1/274‑134 (MQ=255)                                                                                                                                                        tttgtagatctgtgttctggtcaattgttgatactcgtacatagccattaagcagtttaaatccccctggtaaaagcaggaatgatgccattttcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGa                                                                                                           >  1:317‑M1/122‑275 (MQ=255)                                                                                                                                                           gtagatttgtgttatggtcatttgttgatacgcgtacatagccaagaagcatgttaaatccccctggtaaaagcaggaatgatgccatttgctttttatttcttcattttcataaacgTTGTTTTGGGATAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGAGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATgg                                                                                                        >  1:437252‑M1/119‑275 (MQ=255)                                                                                                                                                              gagaAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATg                                                                                                                                                                                                                                       >  2:367891/1‑145 (MQ=255)                                                                                                                                                                gaAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATa                                                                                                   <  1:341667/275‑1 (MQ=255)                                                                                                                                                                  aGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATgcagc                                                                                                                                                                                                                                   <  1:367892/145‑1 (MQ=255)                                                                                                                                                                    gggCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgaaaaataaattgcctgatttaagtgg                                                                                               >  1:420512‑M1/1‑125 (MQ=255)                                                                                                                                                                         gcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgcagaatacccggaactggcaaaggcttatccgacaaataaattgcctcatttacgtggtgagt                                                                                          >  2:475903‑M1/1‑120 (MQ=255)                                                                                                                                                                           gtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttattcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCg                                                                                                                                                                                                            <  1:468127‑M1/57‑1 (MQ=255)                                                                                                                                                                           aCGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgcaaaataaatggctggatttccgtggtgagttt                                                                                        >  2:260279‑M1/1‑118 (MQ=255)                                                                                                                                                                               tttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGttt                                                                                                                                                                                                        >  2:468126‑M1/99‑159 (MQ=255)                                                                                                                                                                                             cACTTCGTGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgac                                                                      >  2:25592‑M1/1‑100 (MQ=255)                                                                                                                                                                                             cACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgac                                                                      <  2:123933‑M1/275‑176 (MQ=255)                                                                                                                                                                                                  ggcgcgctGGTGTTAGGCGGCGAGAATCCGTTTGGCGGTATCAAATCGGATGGCACTGTGGAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccgtcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggc                                                                  <  2:70984‑M1/273‑180 (MQ=255)                                                                                                                                                                                                  agcgggcggCTGTTAAGCCGACAGAATCCTTTTGGCGTTATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGTTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGc                                                                    <  2:297784/271‑1 (MQ=255)                                                                                                                                                                                                  agccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATAATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCACGGGTGCGTTTAATGCTGCCtg                                                                 <  1:398530‑M1/196‑1 (MQ=255)                                                                                                                                                                                                       gcgtctgtgaaGCCGCAAGAATCCGTTGGGGGATATCAAATGGGATGGGACTGTGCAAACGGCTCTCGAAAACCGTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccattccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcggggga                                                            <  1:219566‑M1/271‑186 (MQ=255)                                                                                                                                                                                                        taagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAt                                                                                                                                                                          <  1:360452‑M1/91‑1 (MQ=255)                                                                                                                                                                                                        taagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGc                                                           <  1:50517‑M1/202‑1 (MQ=255)                                                                                                                                                                                                            catgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAg                                                                                                                                                                      >  2:360451‑M1/70‑164 (MQ=255)                                                                                                                                                                                                                   ccGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcacaggcttatccgacaaataaattgcctgatttacggggtgagtttattcgtggctgggatgacgggcgggggctggatacaggtt                                                >  2:171538‑M1/1‑78 (MQ=255)                                                                                                                                                                                                                       agagatccgTTGGGCGACAGCAAATCGGCTGGCCCTTGGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGATGGctctgcattacctgtttgtgtcccggttccgtgtccttcagccactccgccaacaggctggctgaaatgcaatggtgccgatttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggattgatacaggtcgct                                             <  2:33634‑M1/270‑201 (MQ=255)                                                                                                                                                                                                                        attttattcgccgCGATATCATATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAAGAGCAAAACTTAATGCAGCAACGGCTACATTAGGACGCACCGTTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTAt                                           <  1:404777/263‑1 (MQ=255)                                                                                                                                                                                                                             ccGTTTTGTGATATCAAATCGGGTGGCACTGTGCACACGTCTCTCGATAACCTTGGTTTGGGTGAAGGGTCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTAATAGCTATACCGGTTATGATTGGTTGTATTGAGCAATCAGTAATCATTCAGTGGGGGTCGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACaa                                      <  2:361106/275‑1 (MQ=255)                                                                                                                                                                                                                               gtttgggataatcaaatcggatGGCACTGGGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggattgatacaggtggctctattttaa                                    <  2:493955‑M1/265‑210 (MQ=255)                                                                                                                                                                                                                               gTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAACCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggattgatacaggtcgctctattttaa                                    <  1:174586‑M1/275‑210 (MQ=255)                                                                                                                                                                                                                                  tGGCGGAATCAAATCGGATGGCACGGTGCAAACGGGTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCAGTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCa                                 <  2:296265/275‑1 (MQ=255)                                                                                                                                                                                                                                                   aTGGCACTGTGCAAACTGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggattgatacaggtcgctctattttaagtattcaggggtatgcaac                 <  1:25592‑M1/274‑229 (MQ=255)                                                                                                                                                                                                                                                            tgCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggattgatacaggt                                                 >  2:32956‑M1/1‑37 (MQ=255)                                                                                                                                                                                                                                                            atttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAAc        <  1:257616‑M1/253‑1 (MQ=255)                                                                                                                                                                                                                                                               tcttcaatttcagaaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGGGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACgggg    >  2:156674‑M1/19‑275 (MQ=255)                                                                                                                                                                                                                                                               aaaCGGCTCTCGTAAACCTTGGTTTGGGAGTAGGctctgcattaccttttggtgtcccggttccgtggcctccagccactccgccaacaggcgtgctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggattgatacaggtcgctctattttaagtattcaggggtatgcaacggaggatcatgc     <  1:294028‑M1/274‑241 (MQ=255)                                                                                                                                                                                                                                                                aaCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggattgatacaggtcgct                                             <  1:32956‑M1/233‑201 (MQ=255)                                                                                                                                                                                                                                                                 aCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggccaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggattgctacaggtcgctctattttaagtattcaggggtatgcaacggaggatcatgctac  >  2:456363‑M1/1‑32 (MQ=255)                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                   AAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTG‑GTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGGGG  >  NC_000913/1207519‑1208048

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.