mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4240750 | 101 (1.060) | 3 (0.030) | 3/492 | NT | 2.9% | intergenic (+15/+29) | psiE/xylE | phosphate starvation inducible protein/D‑xylose transporter |
| ? | NC_000913 | = 4240758 | 101 (1.100) | intergenic (+23/+21) | psiE/xylE | phosphate starvation inducible protein/D‑xylose transporter | |||||
| * | ? | NC_000913 | = 4127316 | 130 (1.360) | 3 (0.030) | 3/508 | NT | 2.3% | coding (579/609 nt) | yiiX | putative lipid binding hydrolase, DUF830 family protein |
| ? | NC_000913 | = 4127659 | 124 (1.310) | coding (236/609 nt) | yiiX | putative lipid binding hydrolase, DUF830 family protein | |||||
| * | ? | NC_000913 | = 3433349 | 110 (1.150) | 3 (0.030) | 3/500 | NT | 3.0% | coding (212/1125 nt) | smf | DNA recombination‑mediator A family protein |
| ? | NC_000913 | = 3433555 | 88 (0.940) | coding (6/1125 nt) | smf | DNA recombination‑mediator A family protein | |||||
| * | ? | NC_000913 | = 3285843 | 84 (0.880) | 3 (0.030) | 3/506 | NT | 3.6% | coding (366/792 nt) | agaD | N‑acetylgalactosamine‑specific enzyme IID component of PTS |
| ? | NC_000913 | = 3286055 | 77 (0.810) | coding (578/792 nt) | agaD | N‑acetylgalactosamine‑specific enzyme IID component of PTS | |||||
| * | ? | NC_000913 | = 1879834 | 84 (0.890) | 3 (0.030) | 3/506 | NT | 3.4% | coding (115/360 nt) | yeaR | DUF1971 family protein, nitrate‑inducible |
| ? | NC_000913 | = 2515616 | NA (NA) | noncoding (1344/1345 nt) | IS186 | repeat region | |||||
| * | ? | NC_000913 | = 1738840 | 130 (1.360) | 3 (0.030) | 3/498 | NT | 2.9% | coding (997/1026 nt) | purR | transcriptional repressor, hypoxanthine‑binding |
| ? | NC_000913 | = 1739666 | 72 (0.770) | coding (133/933 nt) | ydhB | LysR family putative transcriptional regulator | |||||
| * | ? | NC_000913 | 545672 = | 124 (1.300) | 4 (0.040) | 3/492 | NT | 3.2% | coding (692/1050 nt) | allD | ureidoglycolate dehydrogenase |
| ? | NC_000913 | = 545668 | 120 (1.300) | coding (696/1050 nt) | allD | ureidoglycolate dehydrogenase | |||||
| * | ? | NC_000913 | = 397900 | 106 (1.110) | 3 (0.030) | 3/500 | NT | 2.9% | coding (29/1095 nt) | yaiW | microcin Bac7 uptake protein; outer membrane surface‑exposed lipoprotein |
| ? | NC_000913 | = 398273 | 95 (1.020) | coding (402/1095 nt) | yaiW | microcin Bac7 uptake protein; outer membrane surface‑exposed lipoprotein | |||||