BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NZ_CP034943	767,777	C→G	5.3%	G63A (GGC→GCC)	EO946_RS03930 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP034943	767,777	0	C	G	5.3%	1034.9 / 9.4	341	G63A (GGC→GCC)	EO946_RS03930	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (200/117); new base G (4/20); total (204/137)
Fisher's exact test for biased strand distribution p-value = 1.19e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 372 total aligned reads displayed.

CCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATACCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCATGGGTAACCATCTGGATAACGATATTCGTATTCAAAAGCAGGCCA  >  NZ_CP034943/767642‑767916

gagccgccgccgaagccaggcacagcgccgccgccaataccagggccggcgccgccgccgccgccaggcacagcgccgcgaccaaggcccgggccgccgccgacgcccggcccagccccgcaaccaaacccagggccgcc                                                                                                                                         <  2:4972259‑M1/6‑1 (MQ=255)

gagccgccgccgaagccaggcacagcgccgccgccaataccagggccggagccgccgccgaagccaggcacagcgccgcaaccaatgccaggcccgccgccgaagccaggcacagcgccgcaaccaaagccagcgccccc                                                                                                                                         <  1:1442060‑M1/6‑4 (MQ=255)

  gccgccgccgaagcgagggacagccccggcgccacgacccggggcggagccgccgccgaagccagggacagcgccgctaccacggccagggccgccgccgaagccaggcacagcgccgctaccaatgccagggccgccgc                                                                                                                                       >  1:4326030‑M1/133‑140 (MQ=255)

  gccgccgccgaagccaggcacagcgccgccgccaataccagggccggagccgccgccgaagccaggcacagcgccgctaccaatgccagggccgccgccgaagccaggcacagcgccgctaccaatgccagggccgccgc                                                                                                                                       >  1:3427913‑M1/133‑140 (MQ=255)

   ccgccgAAGCCAGGCACAGCGCCGCCGCCAAAAGCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGACGCACCCAATCCAAGGGCCGACGCCGAAGCCAGGCACACCCCCGCAAGCAAAGCCAGGcccgccgaaccc                                                                                                                                      >  2:2269968/1‑135 (MQ=14)

       cgAAGCCAGGCACAGCGCCGCCGCCAATACCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGccgccgccgccgccg                                                                                                                                  <  1:2832921/140‑1 (MQ=255)

       cgAAGCCAGGCACAGCGCCGCCGCCAATACCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGccgccgccgccgccg                                                                                                                                  <  1:4051163/140‑1 (MQ=255)

       cgAAGCCAGGCACAGCGCCGCCGCCAATACCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGccgccgccgccgccg                                                                                                                                  <  1:4264126/140‑1 (MQ=255)

            ccAGGCACAGCGCCGCCGCCACGACCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGcc                                                                                                                             <  2:4849237/140‑1 (MQ=255)

            ccAGGCACAGCGCCCCCGCCAATACCCGGGCCTGAGCCGCCGCAGACGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCACTGCCAGGGCCGCCGCCGCCGCCGAAGcc                                                                                                                             <  1:2423992/140‑1 (MQ=18)

             cAGGCACAGCGCCGCCGCCAATACCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGAAGCCACGCACAGCCCCGCAACCAAAGCCAGGGCCCCCGCCGCCGCAGAAGccc                                                                                                                            >  2:1279621/1‑139 (MQ=18)

              aGGCACAGCGCCGCCGCCAATACCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAg                                                                                                                           >  1:4615838/1‑140 (MQ=255)

              aGGCACAGCGCCGCCGCCAATACCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAg                                                                                                                           >  2:380558/1‑140 (MQ=255)

                gCACAGCGCCGCCGCCAATACCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCCCAGCCCCGCTACCAATGCCAGGGCCGCCGCCGCCCCCGACGCCAGGc                                                                                                                         >  2:2175230/1‑140 (MQ=255)

                gCACAGCGCCGCCGCCAATACCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGccgccgccgccgccg                                                                                                                                  <  2:2355330/131‑1 (MQ=255)

                gCACAGCGCCGCCGCCAATACCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGc                                                                                                                         >  2:3966674/1‑140 (MQ=255)

                gCACAGCGCCGCCGCCAATACCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAAAGCCAGGGCCGCCCCCCCCGCCGAAACCAGGc                                                                                                                         >  2:4554434/1‑140 (MQ=255)

                      cgccgccgcCAATACCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAgcg                                                                                                                   >  1:3171417/1‑140 (MQ=255)

                      cgccgccgcCAATACCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAgcg                                                                                                                   >  1:1505028/1‑140 (MQ=255)

                         cgccgccAATACCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGcgccg                                                                                                                <  2:1181423/140‑1 (MQ=255)

                           ccgccAATACCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCCATGCCAGGGCCGCCGCCGCCGCCGAAGCCCGGCACAGcgccgcc                                                                                                              >  2:1708192/1‑140 (MQ=255)

                              ccgccaagccgagggccggagccgccgccctagccaggcccagcgccgctaccactgccagggccgccgccgaagccaggcacagcgccgctaccaatgccaggGCCGCCGCCGCCGAAGCCAGGCACAGCgccgccgcc                                                                                                           >  2:3710105‑M1/105‑140 (MQ=255)

                              ccAATCCCCGGGGCGGAGCCGCCGCCGACGCCAGGCACAGCGCCGCTACCAATCCCCGGGCCGCAGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCgccgccgcc                                                                                                           <  2:4357468/140‑1 (MQ=18)

                                    ccAGGGCCGGAGCCGCCGGCGAAGACAGGCACAGCGCCGCTACCACGGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGcc                                                                                                     <  1:2712735/140‑1 (MQ=255)

                                    ccAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGACGCTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGcc                                                                                                     <  1:4922342/140‑1 (MQ=255)

                                        ggCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGGCGAAGCCAGGCACGGCGCCGGTCCCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCCCAGCGCCGCCGCCACTGCCAggg                                                                                                 >  2:290910/1‑140 (MQ=18)

                                        ggCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGca                                                                                                                        >  1:1000435/1‑117 (MQ=255)

                                        ggCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAggg                                                                                                 >  1:3346900/1‑140 (MQ=255)

                                        ggCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAggg                                                                                                 >  1:1754763/1‑140 (MQ=255)

                                        ggCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCCCCCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAgac                                                                                                 >  1:1221384/1‑138 (MQ=255)

                                             gAGCCGCCGCCGAAGCCAGGCACAGCGCCGCTCCCAATGCCAGGCCCTCCGACCAAGCCAGGCACAGCCCCGCTACCAATCACAGGGCCTCCGACGACGCCGAAGCCAGGCACAGCGCCGCCCCCAATGGCACGGCAGGa                                                                                            >  1:213667/1‑140 (MQ=18)

                                             gAGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGa                                                                                            >  1:602764/1‑140 (MQ=255)

                                             gAGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGa                                                                                            >  1:4702120/1‑140 (MQ=255)

                                             gAGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGACAGGGCCGCCGCCGCCGCCGAAGACAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGa                                                                                            >  1:4507773/1‑140 (MQ=255)

                                               gccgccgccgccGCCAGGCACCCCGCCGCTACCACCGCCCGGGCCGCCGCCGAAGCCAGGCAGAGCGCCGCTACCACGGCCAGGGCCGGCGCCGCCGCCGCAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAgc                                                                                          <  2:1569867/140‑1 (MQ=18)

                                               gccgccgccGAAGCCAGGCACAGCGCCGCTACCAAGGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAgc                                                                                          <  2:1401542/140‑1 (MQ=255)

                                                   ccgccgAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGccgccgccgccgccg                                                                                                                                  <  1:3709173/96‑1 (MQ=255)

                                                   ccgccgAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAAGGCCAGGGCCGGAgccgcc                                                                                      >  2:1855656/1‑140 (MQ=255)

                                                     gccgAAGCCAGGCACAGCGCCGCTAACACTGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAgccgccgc                                                                                    <  1:3816237/140‑1 (MQ=255)

                                                           gCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCACTGCCAGGGCCGGAGCCGCCGCCGCAGc                                                                              >  1:2885330/1‑140 (MQ=255)

                                                                gCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGccgccgccgccgccg                                                                                                                                  >  1:806139/1‑83 (MQ=255)

                                                                gCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGc                                                                         >  2:1892895/1‑140 (MQ=255)

                                                                    aGCGCCGCTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCCGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAg                                                                     >  1:1696238/1‑140 (MQ=255)

                                                                      cgccgcTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGACGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAgcg                                                                   >  2:3859527/1‑140 (MQ=255)

                                                                      cgccgcTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGACGCCAGGCACcgcg                                                                   >  2:315430/1‑140 (MQ=255)

                                                                      cgccgcTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAgcg                                                                   >  2:835669/1‑140 (MQ=255)

                                                                      cgccgcTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAgcg                                                                   >  2:1023504/1‑140 (MQ=255)

                                                                      cgccgcTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAgcg                                                                   >  2:660078/1‑140 (MQ=255)

                                                                      cgccgcTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAgcg                                                                   >  2:2109977/1‑140 (MQ=255)

                                                                      cgccgcTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGACAGGCACAgcg                                                                   >  1:160135/1‑140 (MQ=255)

                                                                      cgccgcTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGACAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAgcg                                                                   >  2:1769582/1‑140 (MQ=255)

                                                                           cTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGcgccgcc                                                              >  1:2582987/1‑140 (MQ=255)

                                                                             aCCCATGCCAGGCCCCCCGCCGACGCCATGCACAGCGCCGCTACCACGGCCAGGGCCGCGGCCGCCGCCGAAGCCAGGCAGAGCGCCGCCGCCCATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGcgccgccgc                                                            <  2:4795646/140‑1 (MQ=17)

                                                                              ccAACGCCCGGGCCGCCGCCGACGCCAGGCACAGCGCCGCGACCCCGGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCgccgccgcc                                                           <  2:3499436/140‑1 (MQ=17)

                                                                               ctcggCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCCACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCa                                                          <  2:1947287/136‑1 (MQ=255)

                                                                                aaTGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCgccgccgcc                                                                                                           <  2:594636/90‑1 (MQ=255)

                                                                                  tGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATg                                                       >  2:3604810/1‑140 (MQ=255)

                                                                                  tGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATg                                                       >  2:3090893/1‑140 (MQ=255)

                                                                                     cAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGcgccgccgc                                                            <  2:4537956/132‑1 (MQ=255)

                                                                                        ggCCGCCGCCGAAGCCCGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGAc                                                 >  2:4182868/1‑140 (MQ=255)

                                                                                        ggCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGAc                                                 >  1:4199780/1‑140 (MQ=255)

                                                                                        ggCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGAc                                                 >  1:2270040/1‑140 (MQ=255)

                                                                                        ggCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAAGGCCAGAc                                                 >  1:2028342/1‑140 (MQ=255)

                                                                                            gccgccgAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCATg                                             >  2:3003254/1‑140 (MQ=255)

                                                                                             ccgccgAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAgccgccgc                                                                                    >  2:4254566/1‑100 (MQ=255)

                                                                                             ccgccgAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGcc                                                                             >  1:75906/1‑107 (MQ=255)

                                                                                             ccgccgAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCATgg                                            >  1:4394479/1‑140 (MQ=255)

                                                                                             ccgccgAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCATgg                                            >  2:1744983/1‑140 (MQ=255)

                                                                                               gccgAAGCCCGGCACAGCGCCGCTCCCAATCCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCATGGGt                                          <  2:4315797/140‑1 (MQ=255)

                                                                                                   aaGCCAGGCACAGCGCCGCCCCCACTCCCACCGCCCCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAAGGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCATGGGTAAcc                                      <  2:339684/140‑1 (MQ=17)

                                                                                                          gCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCATGGGTAACCATCTGGa                               >  1:943629/1‑140 (MQ=255)

                                                                                                             gcacatcgcctctaacaatgccaggGGCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATCCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCATGGGTAACCATCTGGATaa                            >  1:3905098‑M1/26‑140 (MQ=255)

                                                                                                             cctcgccgcTACGACTCCCAGCGCCGGCGCCCCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCATGGGTAACCATCTGGATaa                            <  1:1884335/137‑1 (MQ=18)

                                                                                                              aGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCa                                                                                                    >  2:895469/1‑67 (MQ=255)

                                                                                                               gcgcCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCATGGGTAACCATCTGGATAACg                          >  2:2325734/1‑140 (MQ=255)

                                                                                                                cgccgcTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCATGGGTAACCATCTGGATAACGa                         >  2:751250/1‑140 (MQ=255)

                                                                                                                cgccgcTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCATGGGTAACCATCTGGATAACGa                         >  1:3619355/1‑140 (MQ=255)

                                                                                                                cgccgcTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCCCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCATGGGTAACCATCTGGCTAACGa                         >  1:250548/1‑140 (MQ=255)

                                                                                                                     cTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCATGGGTAACCATCTGGATAACGATATTc                    >  2:4146952/1‑140 (MQ=255)

                                                                                                                      tACCACTGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCATGGGTAACCATCTGGATAACGATATTCg                   <  1:1708369/140‑1 (MQ=255)

                                                                                                                           aTGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCATGGGTAACCATCTGGATAACGATATTCGTATTc              <  2:4615838/140‑1 (MQ=255)

                                                                                                                             gCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCATGGGTAACCATCTGGATAACGATATTCGTATTCaa            >  2:3226230/1‑140 (MQ=255)

                                                                                                                             gCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCATGGGTAACCATCTGGATAACGATATTCGTATTCaa            >  2:3273833/1‑140 (MQ=255)

                                                                                                                               cAGGGCCGGCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGcgccgccgc                                                            <  1:3541098/90‑1 (MQ=255)

                                                                                                                                aGGGCCGCCGCCGCCGCCGACGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCATGGGTAACCATCTGGATAACGATATTCGTATTCAAAAg         <  1:1092097/140‑1 (MQ=255)

                                                                                                                                aGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCATGGGTAACCATCTGGATAACGATATTCg                   >  2:2345979/1‑130 (MQ=255)

                                                                                                                                aGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCATGGGTAACCATCTGGATAACGATATTCg                   <  1:2345979/130‑1 (MQ=255)

                                                                                                                                aGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCATGGGTAACCATCTGGATAACGATATTCGTATTCAAAAg         <  1:3018757/140‑1 (MQ=255)

                                                                                                                                aGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCATGGGTAACCATCTGGATAACGATATTCGTATTCAAAAg         <  1:2240143/140‑1 (MQ=255)

                                                                                                                                 cggCCGGCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATCCCAGGCCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCATGGGTAACCATCTGGATAACGATATTCGTATTCAAAAGc        <  2:2699113/139‑1 (MQ=255)

                                                                                                                                  ggCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAgccgccgc                                                                                    <  2:37213/63‑1 (MQ=255)

                                                                                                                                  ggCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCATGGGTCACCATCTGGATAACGATATTCGTATTCAAAAGCa       >  1:1310652/1‑140 (MQ=255)

                                                                                                                                  ggCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCATGGGTAACCATCTGGATAACGATATTCGTATTCAAAAGCa       >  1:4841837/1‑140 (MQ=255)

                                                                                                                                  ggCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCATGGGTAACCATCTGGATAACGATATTCGTATTCAAAAGCa       >  1:670168/1‑140 (MQ=255)

                                                                                                                                  ggCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCATGGGTAACCATCTGGATAACGATATTCGTATTCAAAAGCa       >  1:2208495/1‑140 (MQ=255)

                                                                                                                                       ccgccgccgccgAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGACTCCACGCACAGCGCCGCCGCCAAGTCGAGAACGGGGGTAACCATCTGGATCACTATATTCTTATTCAACAGCAGTccc  >  2:3670819/1‑139 (MQ=17)

                                                                                                                                       CCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCCTGGGTAACCATCTGGATAACGATATGCGTCTTCAAAAGCAGGCCa  <  2:408435‑M1/140‑1 (MQ=255)

                                                                                                                                       CCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCATGGGTAACCATCTGGATAACGATATTCGTATTCAAAAGCAGGCCa  <  1:4574414‑M1/140‑1 (MQ=255)

                                                                                                                                       CCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCATGGGTAACCATCTGGATAACGATATTCGTATTCAAAAGCAGGCCa  <  1:4140011‑M1/140‑1 (MQ=255)

                                                                                                                                       CCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCATGGGTAACCATCTGGATAACGATATTCGTATTCAAAAGCAGGCCa  >  2:2812932‑M1/1‑140 (MQ=255)

CCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATACCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGAAGCCAGGCACAGCGCCGCTACCAATGCCAGGGCCGCCGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGGGCCGGAGCCGCCGCCGAAGCCAGGCACAGCGCCGCCGCCAATGCCAGACCATGGGTAACCATCTGGATAACGATATTCGTATTCAAAAGCAGGCCA  >  NZ_CP034943/767642‑767916

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`