| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,035,865 | G→T | 9.8% | C200F (TGC→TTC) | EO946_RS05350 → | ABC transporter ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,035,865 | 0 | G | T | 9.8% | 769.2 / 18.4 | 303 | C200F (TGC→TTC) | EO946_RS05350 | ABC transporter ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base G (113/150); new base T (38/2); total (151/152) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.17e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 308 total aligned reads displayed.
GATGAACCATTTAGCGGCCTTGACCCTGTCAATGTTGAGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTGCAGTCTCATGAAGGCATTCTCCAATGGAA > NZ_CP034943/1035726‑1036003 | gatgaACCATTTAGCGGCCTTGACCCTGTCAATGTTGAGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTg < 1:2939053/140‑1 (MQ=255)gatgaACCATTTAGCGGCCTTGACCCTGTCAATGTTGAGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTg < 1:4003861/140‑1 (MQ=255)gatgaACCATTTAGCGGCCTTGACCCTGTCAATGTTGAGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTg < 1:2026474/140‑1 (MQ=255) tgaACCATTTAGCGGCCTTGACCCTGTCAATGTTGAGCTGTTAAACGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCa < 2:1972478/140‑1 (MQ=255) tgaACCATTTAGCGGCCTTGACCCTGTCAATGTTGAGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCa < 1:1681190/140‑1 (MQ=255) tgaACCATTTAGCGGCCTTGACCCTGTCAATGTTGAGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCa < 2:4672065/140‑1 (MQ=255) tgaACCATTTAGCGGCCTTGACCCTGTCAATGTTGAGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCa < 2:2696817/140‑1 (MQ=255) tgaACCATTTAGCGGCCTTGACCCTGTCAATGTTGAGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCa < 2:3665561/140‑1 (MQ=255) tgaACCATTTAGCGGCCTTGACCCTGTCAATGTTGAGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCa < 2:167973/140‑1 (MQ=255) tgaACCATTTAGCGGCCTTGACCCTGTCAATGTTGAGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCa < 2:3515700/140‑1 (MQ=255) aaCCATTTAGCGGCCTTGACCCTGTCAATGTTGAGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCATa < 1:1273637/140‑1 (MQ=255) aaCCATTTAGCGGCCTTGACCCTGTCAATGTTGAGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCATa < 1:265995/140‑1 (MQ=255) aaCCATTTAGCGGCCTTGACCCTGTCAATGTTGAGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCATa < 1:3443574/140‑1 (MQ=255) ttAGCGGCCTTGACCCTGTCAATGTTGAGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCATACTGCAg < 2:4141796/140‑1 (MQ=255) cGGCCTTGACCCTGTCAATGTTGAGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGCGGAGCTAGGTGAGAACCTTTGCATACTGCAgaaag > 2:710804/1‑140 (MQ=255) ccTTGACCCTGTCAATGTTGAGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTGTTTTTTATTTTGTAGCCATAGGATGGTGCAGGTGGCGGTGCTATGTGAGAAACTTTTCCTACTGCCgcaaggaa > 1:1503486/1‑140 (MQ=255) ccTTGACCCTGTCAATGTTGAGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTTTTTTATTTTCTATCCATCGGATGGATCAGGTGGTGGAGCTATGTGAGAAACATTTCATACTTCAgaaaggag > 1:1134764/1‑139 (MQ=255) cTTGACCCTGTCAATGTTGAGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCATACTGCAgaaaggaaa < 2:2462318/140‑1 (MQ=255) cccTGTCAATGTTGAGCTGTTAAAAGAGTCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCgg < 1:4910463/140‑1 (MQ=255) gTCAATGTTGAGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTGTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTTCATACTGCCGAAAGGAAAGCCGGTtgt > 2:3975274/1‑140 (MQ=255) gTCAATGTTGAGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTGTATTTTATTTTATAGCCATCGGATTGAGCATGTTGAGGATCTATTTGAGAACCATTTCATACTGCAGAAAGGTAATCCGGTtgt > 1:4682554/1‑140 (MQ=255) gTCAATGTTGAGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTGTATTTTATTTTATAGCCATCGGATTGAGCATGTGGAGGAGCGATGTGAGAACCATTGCATACTGCAGAAAGGAAACCCGGtttt > 1:1008049/1‑138 (MQ=255) gTCAATGTTGAGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTGGATTTTATTTTCTATCCCTCGGATGGAGCATGTGGAGGCGCTATGTTAGAAACTTTTGATACTGCATAAAGGAAAGCCCGTtgt > 1:3880092/1‑140 (MQ=255) gTCAATGTTGAGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCAGCGGATGGAGCATGTGGAGGAGCTATGTGAGAAACTTTGCATAATGCAGAAAGGAAAGCCGGTtgt > 1:3021391/1‑140 (MQ=255) gTCAATGTTGAGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTATAGCCAACGGATGGAGCATGTGGAGGAGCTATGTGATAACCTTTTCATACTGCAGAAAGGAAAACCGGtttt > 1:3286758/1‑138 (MQ=255) gTCAATGTTGAGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCGATTTTATTTTGTTTCCAACCGATTTAGCATTTGGATGAGCTATTTGATAAACTTTTCATAATTAAGAAAGGAAACCCGGtttt > 1:3409638/1‑138 (MQ=255) gTCAATGTTGAGCGGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTATAGCCATCGGATGGAGCATGTGGAGGATCTATGTGAGAACCGTTGCATACTGCAGAAAGGAAAGCCGGtttt > 2:104174/1‑138 (MQ=255) tCAATGTTGAGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTtgtg < 1:3359671/140‑1 (MQ=255) gTTGAGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTgcaagg < 1:1581555/140‑1 (MQ=255) gTTGAGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTgcaagg < 1:1640752/140‑1 (MQ=255) aGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGATCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTgcaaggcaag > 2:1072449/1‑140 (MQ=255) aGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTTCATACTTAAGAAAGTAAAACCGGTTGTgcaaggcaag > 2:419261/1‑140 (MQ=255) aGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTTCATAATGCAGAAAGGAAAGCAGGGTGTgcaatgcaag > 2:1893270/1‑140 (MQ=255) aGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTgcaaggcaag < 2:2849069/140‑1 (MQ=255) aGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTgcaaggcaag > 2:3963524/1‑140 (MQ=255) aGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTGTCTATTTTATTTTGTATCCATAGGATGGAGCATGTGGGGGAGCTATGTGAGAAACATTTCATACTGCACAAAGGAAAGCCGGTTGTgcaaggcaac > 1:210885/1‑139 (MQ=255) aaaaGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAgg < 2:3771356/140‑1 (MQ=255) agagGCTGTGATTTCTTTGAAAATCTTCTTCGTTTGTATTTTATTTTCTAGACATCGTATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCATACTGCAGAAACGAAAGCCGGTTGTGCAAGGCAAGCTGAAGgaga < 1:3200523/140‑1 (MQ=255) agGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCATa > 2:408176/1‑95 (MQ=255) agGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATa < 2:3562489/140‑1 (MQ=255) agGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATa < 1:2749232/140‑1 (MQ=255) cTGTGATTTCTTTGAAAAACAGCGGCGTTTGTATTTTATTTTGTAGCCATCGGATGGAGCAAGTGGAGGAGCTATGTTAGAACCTTTTCATACTTCAGTAAGTTAAGCAGGTTTTGCAATGCAAGCTGAAGGATATAAAg > 2:3078258/1‑140 (MQ=255) cTGTGATTTCTTTGAAAAACAGCGGCGTTTGTATTTTATTTTCTAGCCATCGGATTGAGCATGTGGAGGAGCTATGTGAGAACCTTTTCATAATGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAg > 2:212136/1‑140 (MQ=255) cTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCCTCGGATGGAGCATGTGGAGGAGCTATTTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCCAGCTGAAGGAGATAAAg > 2:4975122/1‑140 (MQ=255) cTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATTTGGAGGAGCTATGTGAGAACCTTTGCATACTTCAGAAAGGAAAGCCGGTTGTGCAAGGCAACCTGAAGGAGATAAAg > 2:4276658/1‑140 (MQ=255) cTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCGTTGCCTACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCGGAAGGAGATAAAg > 2:4340335/1‑140 (MQ=255) cTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTATAGCCATCGGATGGAGCATGTGGAGGAGCGATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAg > 2:2352061/1‑140 (MQ=255) cTGTGATTTCTTTGAAAAACAGCGGCGTTTCGATTTTATTTTCTCGCCATCGGCTGGAGCATGTGGAGGAGCTATGTGAGAACCGTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCCAGCTGAAGGAGATAAAg > 2:4926823/1‑140 (MQ=255) cTGTGATTTCTTTGAAAAACAGCGGCGGTTGTATTTTATTTTGTATCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCATTTCATACAGCAGAAATGAAACCCGGGTGTGCAAGGCAAGCAGAAGGAGATaaaa > 1:1201728/1‑139 (MQ=255) tgATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTATAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCATACTGCAGTAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGt > 2:4510798/1‑140 (MQ=255) aGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGaa < 1:2320777/140‑1 (MQ=255) aGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGaa < 1:1145832/140‑1 (MQ=255) cTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCAtt < 1:3963524/140‑1 (MQ=255) cTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCAtt < 2:3405490/140‑1 (MQ=255) cTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCAtt < 1:4951367/140‑1 (MQ=255) cTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCAtt < 1:2129371/140‑1 (MQ=255) ttattttCTAGCCATCTGATGGAGCATGTTTAGGAGATATGTGAGAACCTTTGCATAATGCATAAAGGAATGGCGGTTGTGCAAGGCTAGCTGAAGTAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTc < 2:2993242/140‑1 (MQ=255) ttattttCTAGCCATCGGATGGCGCATGTGGAGGAGCTATGTGAGAACCTTTGCATACTGCAGAAAGGAACGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTc < 2:4420764/140‑1 (MQ=255) ttattttCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTc < 1:973312/140‑1 (MQ=255) ttattttCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTc < 2:2193393/140‑1 (MQ=255) attttCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCg < 1:3390101/140‑1 (MQ=255) cATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCt < 2:3209811/140‑1 (MQ=255) aGCATGTGGAGGAGCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTg < 2:1931613/140‑1 (MQ=255) aGCATGTGGAGGAGATATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTg < 2:479613/140‑1 (MQ=255) cATGTGGAGGAGCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTGCa < 2:1196070/140‑1 (MQ=255) aTGTGGAGGAGCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTGCAg < 2:1326034/140‑1 (MQ=255) tgtgGAGGAGCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATTATCTGCGTTTTTTGCAGt > 2:2576129/1‑140 (MQ=255) tgtgGAGGAGCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTGCAGt < 1:104174/140‑1 (MQ=255) tgtgGAGGAGCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTGCAGt < 1:2437307/140‑1 (MQ=255) tgtgGAGGAGCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTGCAGt > 1:279293/1‑140 (MQ=255) gtgGAGGAGCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCATGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTGCAGtc > 2:3416133/1‑140 (MQ=255) aggagCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTGCAGTCTCAt > 1:4100583/1‑140 (MQ=255) aggagCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTGCAGTCTCAt > 1:702754/1‑140 (MQ=255) ggagCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTGCAGTCTCATg > 2:2422734/1‑140 (MQ=255) ggagCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTGCAGTCTCATg > 1:373663/1‑140 (MQ=255) ggagCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTGCAGTCTCATg > 1:433471/1‑140 (MQ=255) ggagCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGCCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTGCAGTCTCATg > 2:2514243/1‑140 (MQ=255) gagCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTgcaaggcaag < 1:3537357/57‑1 (MQ=255) gagCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTGCAGTCTCATGa > 2:769872/1‑140 (MQ=255) gagCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTGCAGTCTCATGa < 2:3548370/140‑1 (MQ=255) gagCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTGCAGTCTCATGa < 2:1287628/140‑1 (MQ=255) agCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATGTGCGTTTTTTGCAGTCTCATGaa > 2:4030637/1‑140 (MQ=255) aTGTGAGAACCTTTGCATACTGCAGAAAGGTAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTGCAGTCTCATGAAGGCa < 1:3113673/140‑1 (MQ=255) aTGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTGCAGTCTCATGAATGCa > 2:1492994/1‑140 (MQ=255) aTGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTGCAGTCTCATGAAGGCa > 1:1667373/1‑140 (MQ=255) aTGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTGCAGTCTCATGAAGGCa < 2:1582989/140‑1 (MQ=255) aTGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTGCAGTCTCATGAAGGCa < 2:4502376/140‑1 (MQ=255) aTGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTGCAGTCTCATGAAGGCa < 2:3286758/140‑1 (MQ=255) aTGTGAGAACCTTTGCATACGGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGCATGTCACCAGTCACTCCGATGATGATCTGCGTTTTTTGCAGTCTCATGAAGGCa < 2:1517822/140‑1 (MQ=255) aaCCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTGCAGTCTCATGAAGGCATTCTCCa > 2:112109/1‑140 (MQ=255) aaCCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTGCAGTCTCATGAAGGCATTCTCCa > 2:1629261/1‑140 (MQ=255) aCCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGTAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTGCAGTCTCATGAAGGCATTCTCCaa < 1:4216484/140‑1 (MQ=255) tttGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCAtt > 1:2710147/1‑86 (MQ=255) tttGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTGCAGt < 2:557222/117‑1 (MQ=255) tttGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTGCAGt > 1:557222/1‑117 (MQ=255) tttGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTGCAGTCTCATGAAGGCATTCTCCAATgg < 1:4747167/140‑1 (MQ=255) ttGCATACTGAATAAAGGAAAGCCGGTTTTGCAAGGCATGCTTAAGGAGTTAAAGCGTTCTTTCGGCAAAAAGAATGTCACAATTCACTCCGTTGATGATTTGCGTTTTTTGCAGTTTCTTGAATGAATTCTCCAATgga < 2:1772961/140‑1 (MQ=255) tGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTGCAGTCTCATGAAGGCATTCTCCAATggaa > 1:3611766/1‑140 (MQ=255) tGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTGCAGTCTCATGAAGGCATTCTCCAATggaa > 1:1298913/1‑140 (MQ=255) tGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTGCAGTCTCATGAAGGCATTCTCCAATggaa > 1:442222/1‑140 (MQ=255) | GATGAACCATTTAGCGGCCTTGACCCTGTCAATGTTGAGCTGTTAAAAGAGGCTGTGATTTCTTTGAAAAACAGCGGCGTTTCTATTTTATTTTCTAGCCATCGGATGGAGCATGTGGAGGAGCTATGTGAGAACCTTTGCATACTGCAGAAAGGAAAGCCGGTTGTGCAAGGCAAGCTGAAGGAGATAAAGCGTTCTTTCGGCAAAAAGAATGTCACCATTCACTCCGATGATGATCTGCGTTTTTTGCAGTCTCATGAAGGCATTCTCCAATGGAA > NZ_CP034943/1035726‑1036003 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |