BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	3592725 =	204 (0.930)	4 (0.020)	4/248	9.2	2.2%	coding (424/702 nt)	urtE	urea ABC transporter ATP‑binding subunit UrtE
*	?	NZ_CP034943	= 3592721	172 (0.840)	4 (0.020)	4/248	9.2	2.2%	coding (428/702 nt)	urtE	urea ABC transporter ATP‑binding subunit UrtE
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 207 total aligned reads displayed.

ACGGAAATGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCTCTTCTCCAAGCAGCAGG  >  NZ_CP034943/3592586‑3592861

acGGAAATGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAgctg                                                                                                                                          >  2:823523/1‑140 (MQ=255)

acGGAAATGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAgctg                                                                                                                                          >  2:1939631/1‑140 (MQ=255)

acGGAAAGGTGTCTGGTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCTATAATTGACGGCTGAATTCCTTCCCATGGTGCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTATGGCAATTGCTAgctg                                                                                                                                          >  2:3108575/1‑140 (MQ=255)

 cGGAAATGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAgctgc                                                                                                                                         >  1:262025/1‑140 (MQ=255)

 cGGAAATGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAgctgc                                                                                                                                         >  2:369686/1‑140 (MQ=255)

 cGGAAATGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAgctgc                                                                                                                                         >  1:1172925/1‑140 (MQ=255)

 cGGAAATGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAgctgc                                                                                                                                         <  1:2876302/140‑1 (MQ=255)

 cGGAAATGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAgctgc                                                                                                                                         >  2:2662480/1‑140 (MQ=255)

 cGGAAATGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAgctgc                                                                                                                                         >  1:1676048/1‑140 (MQ=255)

 cGGAAATGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTACCATCAGCGCTCTGGCAATTGCTAgctgc                                                                                                                                         >  2:2319831/1‑140 (MQ=255)

  ggAAATGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAgctgct                                                                                                                                        >  1:966999/1‑140 (MQ=255)

  ggAAATGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAgctgct                                                                                                                                        >  2:1191978/1‑140 (MQ=255)

  ggAAATGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAgctgct                                                                                                                                        >  2:2217753/1‑140 (MQ=255)

         tctcTTTTTCTGGAAATTTCTACTATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGTATTTCCCATCAGCGCTCTGGCAATTGCTAGctgctgctgctg                                                                                                                                 >  1:1201191/1‑140 (MQ=255)

         tcactTTTTCTGGAAATTTCTACGATAACTTGTCTGATTATTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGctgctgctgctg                                                                                                                                 >  1:812306/4‑140 (MQ=255)

           tctTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGc                                                                                                                               <  2:1971342/140‑1 (MQ=255)

                       aaTTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAAt                                                                                                                   <  1:1096484/140‑1 (MQ=255)

                          ttCTCCGATAACTTGTCTGATTAGTTCGATAATTGACGGCGGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATcgc                                                                                                                <  1:3054741/140‑1 (MQ=255)

                               cGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTA‑‑‑GCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTg                                                                                                        <  2:1480137/140‑1 (MQ=255)

                                  tAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTg                                                                                                        <  2:336104/140‑1 (MQ=255)

                                  tAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTg                                                                                                        <  2:1535198/140‑1 (MQ=255)

                                      gtGTCTGATTAGTTCGATACTTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGt                                                                                                    <  1:1881430/139‑1 (MQ=255)

                                       tGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTc                                                                                                   >  2:1401742/1‑140 (MQ=255)

                                         tCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCaa                                                                                                 >  2:2177535/1‑140 (MQ=255)

                                             aTTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCAt                                                                                             <  1:2069103/140‑1 (MQ=255)

                                             aTTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCAt                                                                                             <  2:1745966/140‑1 (MQ=255)

                                              ttAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCAtc                                                                                            <  1:1545933/140‑1 (MQ=255)

                                              ttAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCAtc                                                                                            <  1:745031/140‑1 (MQ=255)

                                                  ttCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCtt                                                                                        >  2:1375846/1‑140 (MQ=255)

                                                  ttCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCtt                                                                                        >  1:1906076/1‑140 (MQ=255)

                                                   tCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCttt                                                                                       <  2:2613310/140‑1 (MQ=255)

                                                   tCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCttt                                                                                       <  2:2962982/140‑1 (MQ=255)

                                                       tAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTaaa                                                                                   >  2:930469/1‑140 (MQ=255)

                                                       tAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTaaa                                                                                   >  1:2680504/1‑140 (MQ=255)

                                                       tAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTaaa                                                                                   >  1:1747532/1‑140 (MQ=255)

                                                       tAATTGACGGCTGAATTCCTTCCATTGGTACATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCGAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTaaa                                                                                   <  1:3145663/140‑1 (MQ=255)

                                                        aaTTGACTGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCACATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAg                                                                                  <  1:2242797/140‑1 (MQ=255)

                                                        aaTTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAg                                                                                  <  1:293828/140‑1 (MQ=255)

                                                               ggCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGaaa                                                                           >  1:2985529/1‑140 (MQ=255)

                                                                       tccttccATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGaa                                                                   <  2:1676048/140‑1 (MQ=255)

                                                                         cttccATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGAGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCTCCTGTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGaaaa                                                                 >  2:1884856/1‑140 (MQ=255)

                                                                           tccATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAAt                                                               >  1:258787/1‑140 (MQ=255)

                                                                           tccATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAAt                                                               >  1:3256446/1‑140 (MQ=255)

                                                                           tccATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAAt                                                               >  1:2154237/1‑140 (MQ=255)

                                                                            ccATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATg                                                              <  1:1587608/140‑1 (MQ=255)

                                                                             cATTTGTTCATCAAGTAAAATAATTTTCGGATTTCCCCTCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGt                                                             <  1:608632/140‑1 (MQ=255)

                                                                             cATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGt                                                             <  1:95667/140‑1 (MQ=255)

                                                                             cATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGt                                                             <  1:1991715/140‑1 (MQ=255)

                                                                             cATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGt                                                             <  2:2015562/140‑1 (MQ=255)

                                                                             cATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGt                                                             <  2:2780419/140‑1 (MQ=255)

                                                                             cATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGt                                                             <  1:590730/140‑1 (MQ=255)

                                                                             cATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGt                                                             <  2:434169/140‑1 (MQ=255)

                                                                             cATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGt                                                             <  1:3334286/140‑1 (MQ=255)

                                                                             cATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCGAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGt                                                             <  2:183308/140‑1 (MQ=255)

                                                                              aTTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTc                                                            >  1:2356501/1‑140 (MQ=255)

                                                                                   ttCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCt                                                       >  2:2313653/1‑140 (MQ=255)

                                                                                   ttCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCt                                                       <  2:1304033/140‑1 (MQ=255)

                                                                                   ttCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCt                                                       <  2:15085/140‑1 (MQ=255)

                                                                                   ttCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCt                                                       >  2:1438188/1‑140 (MQ=255)

                                                                                    tcatcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCtt                                                      >  1:1569310/1‑140 (MQ=255)

                                                                                     catcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTg                                                     >  1:1817676/1‑140 (MQ=255)

                                                                                       tcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCAt                                                                                             >  1:1527452/1‑98 (MQ=255)

                                                                                       tcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAACCCACTGAAAAATGTCTTCCTTGAc                                                   >  2:871896/1‑140 (MQ=255)

                                                                                       tcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                                   <  1:1796291/140‑1 (MQ=255)

                                                                                       tcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                                   >  1:2115860/1‑140 (MQ=255)

                                                                                       tcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                                   <  1:1375846/140‑1 (MQ=255)

                                                                                       tcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCGTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCATTGAc                                                   >  2:1564111/1‑140 (MQ=255)

                                                                                        caAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                                   <  1:1129851/139‑1 (MQ=255)

                                                                                        caAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                                   >  2:1129851/1‑139 (MQ=255)

                                                                                            tAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCAt                                                                                             >  1:1038966/1‑93 (MQ=255)

                                                                                            tAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCAt                                                                                             <  2:1038966/93‑1 (MQ=255)

                                                                                             aaaaTAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                                   >  2:2734754/1‑134 (MQ=255)

                                                                                             aaaaTAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                                   <  1:2734754/134‑1 (MQ=255)

                                                                                             aaaaTAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                                   <  1:920369/134‑1 (MQ=255)

                                                                                                    ttttCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATtctc                                      <  2:2413106/140‑1 (MQ=255)

                                                                                                             ttCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCttcttc                             <  2:679160/140‑1 (MQ=255)

                                                                                                             ttCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTATTCCTTGACCTCCCCCATTCTCTCCttcttc                             <  2:1624820/140‑1 (MQ=255)

                                                                                                                  aTCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAg                        <  1:1167413/140‑1 (MQ=255)

                                                                                                                  aTCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAg                        <  1:1191978/140‑1 (MQ=255)

                                                                                                                    cAGCGCTCTGGCAATTGCTA‑‑‑GCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGct                   <  1:2325056/140‑1 (MQ=255)

                                                                                                                       ggcTCTGACAATTGCTAGCTGCTGCTGCTTGCCTACGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCAATTAAAAATGTCTTCCTTGACGTCCCCCATTCTCTCCTTCTTCGGAAGCGGct                   <  2:1462107/139‑1 (MQ=255)

                                                                                                                       cgcTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGct                   <  2:785968/140‑1 (MQ=255)

                                                                                                                         ctctGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGctct                 >  1:2042411/1‑140 (MQ=255)

                                                                                                                         ctctGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGctct                 >  2:2350696/1‑140 (MQ=255)

                                                                                                                         ctctGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGctct                 >  1:536866/1‑140 (MQ=255)

                                                                                                                         ctctGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGctct                 >  1:641052/1‑140 (MQ=255)

                                                                                                                            tGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCAGTCTCTCCTTCTTCGGAAGCGGCtcttct              >  1:2222362/1‑140 (MQ=255)

                                                                                                                            tGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCATTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCtcttct              <  2:423449/140‑1 (MQ=255)

                                                                                                                            tGGCAAGTGCGAGCTGCTGCTGCTGGCATCCGCTTAAATCGCCGACTTTGCGGTCAAGCATATCTTTTAAAGCAGGAAACGAGTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCtcttct              <  2:2572299/140‑1 (MQ=255)

                                                                                                                              gCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCTCTTCTcc            >  2:1241103/1‑140 (MQ=255)

                                                                                                                                 aTTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCTCTTCTCCAag         >  1:1424138/1‑140 (MQ=255)

                                                                                                                                 aTTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCTCTTCTCCAag         >  1:1434731/1‑140 (MQ=255)

                                                                                                                                    gCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCTCTTCTCCAagcag      >  2:1180246/1‑140 (MQ=255)

                                                                                                                                    gCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCTCTTCTCCAagcag      >  2:3025778/1‑140 (MQ=255)

                                                                                                                                    gCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCTCTTCTCCAagcag      <  1:1398975/140‑1 (MQ=255)

                                                                                                                                        gctgctgctgctGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTcc                                                        >  2:2339332/1‑86 (MQ=255)

                                                                                                                                        gctgctgctgctGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGa                          <  2:3171653/116‑1 (MQ=255)

                                                                                                                                        gctgctgctgctGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGa                          >  1:3171653/1‑116 (MQ=255)

                                                                                                                                        gctgctgctgctGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCTCTTCTCCAAGCAGCAgg  <  1:369686/140‑1 (MQ=255)

                                                                                                                                        gctgctgctgctGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACAACTGAAAACTGTCTTCCTTTACCTCCCCCATTATCTCCTTCTTCGGCAGCGGCTCTTCTCAAAgcagcacg  >  1:2008213/1‑138 (MQ=255)

ACGGAAATGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCTCTTCTCCAAGCAGCAGG  >  NZ_CP034943/3592586‑3592861

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.