Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP034943 | 1,925,430 | 0 | T | G | 24.1% | 244.1 / 20.7 | 116 | N1876H (AAC→CAC) | EO946_RS09730 | non‑ribosomal peptide synthetase |
Reads supporting (aligned to +/- strand): ref base T (12/76); new base G (28/0); total (40/76) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 9.31e-18 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 123 total aligned reads displayed.
TTATATTGCTGATCCGCTCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCGCTGCTCTGGATAGTCCGGATCAATAGGCACGTAGGCGCCGCCGGCTTTTAATACGGCCAGAATTCCCACAACCAGTTCGATGCTGTGGTCGCTGATGATAGCTGCGGTTCGGTCC > NZ_CP034943/1925292‑1925563 | ttATATTGCTGATCCGCTCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGttt < 1:1133079/140‑1 (MQ=255) ttATATTGCTGATCCGCTCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGttt < 1:324621/140‑1 (MQ=255) ttATATTGCTGATCCGCTCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGttt < 1:324610/140‑1 (MQ=255) ttATATTGCTGATCCGCTCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGttt < 1:2475970/140‑1 (MQ=255) tataTTGCTGATCCGCTCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTa < 2:1082698/140‑1 (MQ=255) atatTGCTGATCCGCTCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTaa < 2:1488234/140‑1 (MQ=255) tatTGCTGATCCGCTCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGCGTCGTTTAat < 2:1693165/140‑1 (MQ=255) tatTGCTGATCCGCTCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAat < 2:2142499/140‑1 (MQ=255) tatTGCTGATCCGCTCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAat < 2:1835972/140‑1 (MQ=255) tatTGCTGATCCGCTCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAat < 1:217097/140‑1 (MQ=255) tatTGCTGATCCGCTCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAat < 2:1181402/140‑1 (MQ=255) tatTGCTGATCCGCTCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAat < 2:1105558/140‑1 (MQ=255) tatTGCTGATCCGCTCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAat < 1:294595/140‑1 (MQ=255) tagggCTGATCCGCTCAAGATCAGAGCGCCCCTTGTCCGCAGAATTTTCATCATCCAATAGACCGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCGGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAat < 2:2225543/136‑1 (MQ=255) tGCTGATCCGCTCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTGTTatatt > 1:2825701/1‑139 (MQ=255) cTGATCCGCTCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAatatata < 1:1726429/140‑1 (MQ=255) cTGATCCGCTCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTGTAattaata > 2:909133/1‑135 (MQ=255) cTCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATTGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAATACAATTTCTGTTTTAGAGTAGTGTTAAATATATTTTAttg > 2:1309262/1‑139 (MQ=255) cTCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTCGAGTCGTGTAAAATAAAATGTAtac > 2:66592/1‑138 (MQ=255) cTCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATAGTaata > 2:2149983/1‑137 (MQ=255) cTCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTGTa > 2:3389903/1‑125 (MQ=255) cTCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTGTAATATATATTTTAtta > 2:933081/1‑139 (MQ=255) cTCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTGTAATATAAAATTTAtta > 1:1864778/1‑139 (MQ=255) tCAAGATTCGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGAGGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATCTATTGTATTCg < 2:2494603/140‑1 (MQ=255) tCAAGATTAGTGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCg < 1:2149983/140‑1 (MQ=255) tCAAGATTAGAGCGCTCCTTGTTATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCg < 2:2049248/140‑1 (MQ=255) tCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCg < 2:1893042/140‑1 (MQ=255) tCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCg < 2:1522569/140‑1 (MQ=255) tCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCg < 2:1205260/140‑1 (MQ=255) tCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCg < 2:64862/140‑1 (MQ=255) tCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCg < 2:1181283/140‑1 (MQ=255) tCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCg < 1:215518/140‑1 (MQ=255) tCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCg < 2:1874430/140‑1 (MQ=255) tCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCg < 2:3387818/140‑1 (MQ=255) tCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCg < 1:1948049/140‑1 (MQ=255) tCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCg < 2:3298150/140‑1 (MQ=255) tCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCg < 2:2707957/140‑1 (MQ=255) tCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCg < 1:2616605/140‑1 (MQ=255) tCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAACATATATTGTATTCg < 2:1080773/140‑1 (MQ=255) gccagcttAGAGCGCTCCGCGTGATACCCAGGTTCATCATCCCATAGAACGAGCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTGAGAGTCGTTTAATATATATTGTATTCg < 2:1957099/134‑1 (MQ=255) aTTAGAGCTCTCCTTGTGATAAGAATTTTCATCATCCATTTGAACGATCGTGCCTTCATGGGCCTATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCgctgct < 2:1605024/140‑1 (MQ=255) aTTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCgctgct < 2:1052221/140‑1 (MQ=255) aTTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCgctgct < 2:219456/140‑1 (MQ=255) aTTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCgctgct < 2:2220873/140‑1 (MQ=255) aTTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCgctgct < 1:1117547/140‑1 (MQ=255) tAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTTAAAGAAATTGTATTAgctggagg > 2:1724841/1‑136 (MQ=255) gagCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTGATATATATTTTATTAGCTGCTCTgg > 2:277489/1‑140 (MQ=255) agCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATCTATAATTTATTTtctgctggtga > 1:1798700/1‑135 (MQ=255) agCGCTCCTTGTGATAAGAATTGTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTACAGTCGTTTAATATATAATGTATTCGCTGCTCTGGa < 1:3126239/140‑1 (MQ=255) cTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGttt > 1:714428/1‑109 (MQ=255) cTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGttt < 2:714428/109‑1 (MQ=255) cTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTTATATATAATTTATTAGCTGCTCTTGATatt > 2:1092/1‑138 (MQ=255) cTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAAGATAAATTGTATTAGCGGCTCGGGTTAGt > 1:2227391/1‑140 (MQ=255) cTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTGTTATATAAATTTTATTAGCTTCGGTGGCTAGt > 2:907194/1‑140 (MQ=255) cTCCTTGTGATAAGAATTTTCATCAACCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTGTAAAATAAAAATTATTAGCTGCTCTTGATatt > 2:1722016/1‑138 (MQ=255) tCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTTATAAATATTGTATTTGCGGCTCTGGATatta > 2:90720/1‑137 (MQ=255) tCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCGCTGCTCTGGATAGTc < 2:2857370/140‑1 (MQ=255) tCCTGGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTGTAATATAAAGTGTTTGAGGTGCTGTGGATAGtg > 2:193433/1‑139 (MQ=255) ttGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCGCTGCTCTGGATAGTCCgg < 1:1149100/140‑1 (MQ=255) gATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCGCTGCTCTGGATAGTCCGGATCa < 2:290794/140‑1 (MQ=255) gATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCGCTGCTCTGGATAGTCCGGATCa < 2:2156240/140‑1 (MQ=255) tAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCGCTGCTCTGGATAGTCCGGATCAAt < 2:3024056/140‑1 (MQ=255) aaGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCGCTGCTCTGGATAGTCCGGATCAATa < 1:1612762/140‑1 (MQ=255) aaGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCGCTGCTCTGGATAGTCCGGATCAATa < 1:876366/140‑1 (MQ=255) aaGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCGCTGCTCTGGATAGTCCGGATCAATa < 1:495707/140‑1 (MQ=255) cAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCGCTGCTCTGGATAGTCCGGATCAATAGGCACGTAGGcgccgc < 2:1543177/140‑1 (MQ=255) cAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCGCTGCTCTGGATAGTCCGGATCAATAGGCACGTAGGcgccgc < 2:1868656/140‑1 (MQ=255) aaTAGAACGATCGTGAGTTCATGGGCCAATCTCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCGCTGCTCTGGATAGTCCGGATCAATAGGCACGTAGGCgccgcc < 1:1895585/140‑1 (MQ=255) cGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGttt < 1:2444022/74‑1 (MQ=255) cGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTGTTATATATATTGTATTAGGTGCTCTGGATAGTGCGGATCAATATGGCCCTAGGCGCCGCCGGCtgtt > 2:1972440/1‑140 (MQ=255) cGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTGTAATATATATTGTATTGGCGGCGCTGGATAGTCCGGATAAATATGCAAGGAGGCGCCCCCCGCgttt > 2:771287/1‑140 (MQ=255) cGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTGGTATATATATTTTTTTTGCTGGGGTTGATAGTGCGGAACAAAAAGCCCCTATGCCCCCCCGGCtttt > 2:1412577/1‑140 (MQ=255) aTCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTGTAATATATATTTTATTAGCTGCTCTGGCTAGTGCGGGTCAATAGGCCCGTAAGCGCCGCCCGCGATTaa > 2:1674071/1‑140 (MQ=255) tCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTGTTATAAATATTTTTTTAGCTGCTCGGGATATTACGGATGAAAATGCACCGAGGCGCCCCCGGCGTTTAAt > 1:3383205/1‑140 (MQ=255) tGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTTATATATAATGTATTTGCTGCTATTGTTAGTACGGATGAATAGGAACGTTAGCGCCCCCGGCTTTTAATaag > 2:2242937/1‑138 (MQ=255) tGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTGTAATATATATTGTATTAGCTGCTCTGGCTATTCCGGTACAAAATGCACCGAGGCGCCGCCCGCGTTTAATaaa > 2:348955/1‑138 (MQ=255) ccTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCGCTGCTCTGGATAGTCCGGATCAATAGGCACGTAGGCGCCGCCGGCTTTTAATACGGc < 1:3346807/140‑1 (MQ=255) ccTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCGCTGCTCTGGATAGTCCGGATCAATAGGCACGTAGGCGCCGCCGGCTTTTAATACGGc < 1:3138629/140‑1 (MQ=255) ccTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTGTTATATATATTTTTTTTGGTGGTCTGGGTATTGCCGGTAAATAGGCCCGGAGGCGCCCCCCGGGGTTAATAAGGc > 1:2757302/1‑140 (MQ=255) aTGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCGCTGCTCTGGATAGTCCGGATCAATAGGCACGTAGGCGCCGCCGGCTTTTAATACGGCCAGaa < 2:1882551/140‑1 (MQ=255) gCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCGCTGCTCTGGATAGTCCGGATCAATAGGCACGTAGGCGCCGCCGGCTTTTAATACGGCCAGAATTcc < 2:3276275/140‑1 (MQ=255) aTCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTGTTATTGATAATTTATTAGCTGAGCGGGATAGTCCCGATCAAAAAGCACCTAGTCGCCGCCGCCTTTTAATAAGGCCCGAATTAAcaca > 2:1932591/1‑140 (MQ=255) aTCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTGTTATATATATTGTATTAGCTGGTGAGGATATTCCGGGTCAAAATGCACGGAGTGGCCGCCCGCTTGTTATAAGGCCACAATTGAcaca > 2:1810067/1‑140 (MQ=255) cGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCGCTGCTCTGGATAGTCCGGATCAATAGGCACGTAGGCGCCGCCGGCTTTTAATACGGCCAGAATTCCCACAAc < 1:1674071/140‑1 (MQ=255) ctgAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCGCTGCTCTGGATAGTCCGGATCAATAGGCACGTAGGCGCCGCCGGCTTTTAATACGGCCAGAATTCCCACAACCAGtt < 1:1217003/140‑1 (MQ=255) tGGCTCTGTGTCAATACACTTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCGCTGCTCTGGATAGTCCGGATCAATAGGCACGTAGGCGCCGCCGGCTTTTAATACGGCCAGAATTCCCACAACCAGTTCGATGCt < 1:907194/140‑1 (MQ=255) gCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCGCTGCTCTGGATAGTCCGGATCAATAGGCACGTAGGCGCCGCCGGCTTTTAATACGGCCAGAATTCCCACAACCAGTTCGATGCtgt < 2:2519624/140‑1 (MQ=255) ctctGTGTCAAGACAATTTCTGTTTTAGAGTCGTGTTATATATATTTTTTTGGGGGGTCTGGGTAGTGCGGATCAAAAGGCCCCGACGCGCCCCCGGCTTTTAAAAAGGCCCGAATTACCACAACCAATTCGAATCtgtg > 2:462917/1‑140 (MQ=255) gtgtCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTAGTCGCTGCTCTGGATAGTCCGGATCAATAGGCACGTAGGCGCCGCCGGCTTTTAATACGGCCAGAATTCCCACAACCAGTTCGATGCTGTGGTCg < 2:1843849/140‑1 (MQ=255) gtCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCGCTGCTCTGGATAGTCCGGATCAATAGGCACGTAGGCGCCGCCGGCTTTTAATACGGCCAGAATTCCCACAACCAGTTCGATGCTGTGGTCGCt < 1:2373668/140‑1 (MQ=255) gACAATTTCTGTTTTAGAGTCGTTTTATATATATTTTATTAGCTGCTCTTGGTATTGCGGATAAATATTGACCTAGGCGCCGCCGGCGTTTAATAAAGCCAGAAATACCACAACCACATAGCTGATGTGGTGGCggatga > 2:3075386/1‑140 (MQ=255) aTTTCTGTTTTAGAGTCGTGTTATATATATTTTTTTTGCTGCTCTGGATATTCCGGGTAAAAAGGCACGGAGGCGCCCCCCGCGTTTTATACCGCCAGAAATCCCACAACCAGTTCGATGCGGTGGTGGCTGATGATAGc > 2:2509830/1‑140 (MQ=255) aTTTCTGTTTTAGAGTCGTGTAATATATATTTTATTAGCTGCTCTGGGTAGTGCGGATCAAAATGCACCTATGCGCCGCCCGCTTTTAATAAGGCCACAATTGCCACAAACACTTCGATTCGGTTGTGGCGGTTGATAGc > 2:2520727/1‑140 (MQ=255) aTTTCTGTTTTAGAGTCGTGTAATATATATTGTATTAGCTGCTCTGGATATTACGGATCAATAGGCACCTACGCCCCGCCGGCTTTTAATAAGGCCACAATTACCACAACACCGTCGCTGCGGTGGTCGCTGATGCTacg > 2:2003473/1‑138 (MQ=255) tttCTGTTTTAGAGTCGTTTAATATATATTGTATTCGCTGCTCTGGATAGTCCGGATCAATAGGCACGTAGGCGCCGCCGGCTTTTAATACGGCCAGAATTCCCACAACCAGTTCGATGCTGTGGTCGCTGATGATAGCt < 1:1724841/140‑1 (MQ=255) ttttAGAGTCGTTTAATATATATTGTATTCGCTGCTCTGGATAGTCCGGATCAATAGGCACGTAGGCGCCGCCGGCTTTTAATACGGCCAGAATTCCCACAACCAGTTCGATGCTGTGGTCGCTGATGATAGCTGCGGtt < 2:1758901/140‑1 (MQ=255) ttttAGAGTAGTTTAATATATATTGTATTCGCTGCTCTGGATAGTCCTGATCAATAGGCACGTAGGCGCCGCCGGCTTTTAATACGGCCAGAATTCCCACAACCAGTTCGATGCTGTGGTCGCTGATGATAGCTGCGGtt < 1:1810067/140‑1 (MQ=255) gagTCGTTTAATATATATTGTATTCGCTGCTCTGGATAGTCCGGATCAATAGGCACGTAGGCGCCGCCGGCTTTTAATACGGCCAGAATTCCCACAACCAGTTCGATGCTGTGGTCGCTGATGATAGCTGCGGTTCGGTc < 1:1518614/140‑1 (MQ=255) agTCGTTTAATATATATTGTATTCGCTGCTCTGGATAGTCCGGATCAATAGGCACGTAGGCGCCGCCGGCTTTTAATACGGCCAGAATTCCCACAACCAGTTCGATGCTGTGGTCGCTGATGATAGCTGCGGTTCGGTcc < 2:418346/140‑1 (MQ=255) agTCGTTTAATATATATTGTATTCGCTGCTCTGGATAGTCCGGATCAATAGGCACGTAGGCGCCGCCGGCTTTTAATACGGCCAGAATTCCCACAACCAGTTCGATGCTGTGGTCGCTGATGATAGCTGCGGTTCGGTcc < 2:2446371/140‑1 (MQ=255) | TTATATTGCTGATCCGCTCAAGATTAGAGCGCTCCTTGTGATAAGAATTTTCATCATCCAATAGAACGATCGTGCCTTCATGGGCCAATCGCTGCTGAAGATGGCTCTGTGTCAAGACAATTTCTGTTTTAGAGTCGTTTAATATATATTGTATTCGCTGCTCTGGATAGTCCGGATCAATAGGCACGTAGGCGCCGCCGGCTTTTAATACGGCCAGAATTCCCACAACCAGTTCGATGCTGTGGTCGCTGATGATAGCTGCGGTTCGGTCC > NZ_CP034943/1925292‑1925563 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |