BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	= 165756	262 (1.170)	4 (0.020)	4/224	9.3	1.5%	noncoding (65/73 nt)	EO946_RS00965	tRNA‑Thr
*	?	NZ_CP034943	166185 =	300 (1.620)	4 (0.020)	4/224	9.3	1.5%	noncoding (66/76 nt)	EO946_RS00985	tRNA‑Ala
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 265 total aligned reads displayed.

CGCAGTAGCTCAGTGGTAGAGCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGTCGCGGGTTCGAATCCCGTCTTCC  >  NZ_CP034943/165617‑165894

       gCTCAGTGGTAGAGCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGc                                                                                                                                     <  1:1040625/140‑1 (MQ=255)

             tGGTAGAGCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTttatt                                                                                                                               <  1:3109554/140‑1 (MQ=255)

             tGGTAGAGCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTttatt                                                                                                                               >  1:2373359/1‑140 (MQ=255)

             tGGTAGAGCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTttatt                                                                                                                               <  1:3177888/140‑1 (MQ=255)

               gTAGAGCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTaa                                                                                                                             <  1:2767230/140‑1 (MQ=255)

                 agagCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAAt                                                                                                                           >  2:1414140/1‑140 (MQ=255)

                 agagCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTGGGAAGCTTTATTAAAt                                                                                                                           >  2:1482951/1‑140 (MQ=255)

                  gagaTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATg                                                                                                                          >  2:277662/1‑140 (MQ=255)

                  gagCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATg                                                                                                                          >  2:474446/1‑140 (MQ=255)

                  gagCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATg                                                                                                                          >  2:3220178/1‑140 (MQ=255)

                     cTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGtat                                                                                                                       <  1:2468414/140‑1 (MQ=255)

                     cTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGtat                                                                                                                       >  2:2024199/1‑140 (MQ=255)

                     cTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGtat                                                                                                                       <  1:269749/140‑1 (MQ=255)

                     cTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGtat                                                                                                                       <  1:2730459/140‑1 (MQ=255)

                     cTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGtat                                                                                                                       <  1:1145786/140‑1 (MQ=255)

                       aTCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTaaa                                                                                                                            <  1:865499/133‑1 (MQ=255)

                       aTCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTaaa                                                                                                                            >  2:865499/1‑133 (MQ=255)

                       aTCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGtatta                                                                                                                     >  1:2791195/1‑140 (MQ=255)

                       aTCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGtatta                                                                                                                     >  1:2813654/1‑140 (MQ=255)

                       aTCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGtatta                                                                                                                     >  2:1258824/1‑140 (MQ=255)

                       aTCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGtatta                                                                                                                     >  1:895758/1‑140 (MQ=255)

                       aTCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGtatta                                                                                                                     >  2:955270/1‑140 (MQ=255)

                       aTCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGtatta                                                                                                                     >  1:2081046/1‑140 (MQ=255)

                       aTCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGtatta                                                                                                                     >  2:3127669/1‑140 (MQ=255)

                       aTCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGtatta                                                                                                                     >  2:3263185/1‑140 (MQ=255)

                       aTCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGtat                                                                                                                       <  1:2326834/138‑1 (MQ=255)

                       aTCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGtat                                                                                                                       >  2:2326834/1‑138 (MQ=255)

                       aTCGGCTGTTAACAGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGAAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCGTGGAAGCTTTATTAAATGtatta                                                                                                                     >  2:2914011/1‑140 (MQ=255)

                               ttAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAg                                                                                                             >  1:256612/1‑140 (MQ=255)

                               ttAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAg                                                                                                             <  2:3056173/140‑1 (MQ=255)

                               ttAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGGATTATTACCAAg                                                                                                             >  1:2082750/1‑140 (MQ=255)

                                  aCCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGtt                                                                                                          <  2:3410245/140‑1 (MQ=255)

                                      aTCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTtctc                                                                                                      >  2:1668540/1‑140 (MQ=255)

                                      aTCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTtctc                                                                                                      >  2:2457732/1‑140 (MQ=255)

                                      aTCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTtctc                                                                                                      >  2:3183542/1‑140 (MQ=255)

                                      aTCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTtctc                                                                                                      >  2:1028153/1‑140 (MQ=255)

                                      aTCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTGGGAAGCTTTATTAAATGTATTATTACCAAGGTTtctc                                                                                                      >  2:1947061/1‑140 (MQ=255)

                                      aTCGGTCGTAGGTTCGAAACCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGTTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTtatc                                                                                                      >  2:3344121/1‑140 (MQ=255)

                                         ggTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCaaa                                                                                                   >  1:1189467/1‑140 (MQ=255)

                                         ggTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCaaa                                                                                                   <  2:2121432/140‑1 (MQ=255)

                                         ggTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCaaa                                                                                                   <  2:1603495/140‑1 (MQ=255)

                                         ggTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCaaa                                                                                                   <  2:1120456/140‑1 (MQ=255)

                                                ggTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTgg                                                                                                                                         <  1:2034771/95‑1 (MQ=255)

                                                ggTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGgaga                                                                                            <  1:1697800/140‑1 (MQ=255)

                                                     gAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCt                                                                                       >  2:839482/1‑140 (MQ=255)

                                                     gAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCt                                                                                       >  2:690904/1‑140 (MQ=255)

                                                     gAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCt                                                                                       >  1:1585854/1‑140 (MQ=255)

                                                     gAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCt                                                                                       >  2:2586727/1‑140 (MQ=255)

                                                     gAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCt                                                                                       >  2:1732682/1‑140 (MQ=255)

                                                     gAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCt                                                                                       >  2:140057/1‑140 (MQ=255)

                                                     gAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCt                                                                                       >  2:1346621/1‑140 (MQ=255)

                                                     gAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACGTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCt                                                                                       >  1:3170005/1‑140 (MQ=255)

                                                                 cGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCg                                                                           >  1:2923416/1‑140 (MQ=255)

                                                                 cGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCg                                                                           >  1:483984/1‑140 (MQ=255)

                                                                 cGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCg                                                                           >  1:2445188/1‑140 (MQ=255)

                                                                 cGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCg                                                                           >  1:3264105/1‑140 (MQ=255)

                                                                  ggAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATTGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGTAAGCTTTATTAAATGTATTATTAACAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGa                                                                          <  2:1803549/140‑1 (MQ=255)

                                                                      ccATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATg                                                                      >  1:555848/1‑140 (MQ=255)

                                                                       cATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGc                                                                     <  2:2869669/140‑1 (MQ=255)

                                                                                cATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTgg                                                                                                                                         <  2:2660996/63‑1 (MQ=255)

                                                                                cATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAagtagt                                                            >  2:1868893/1‑140 (MQ=255)

                                                                                cATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAagtagt                                                            >  2:2211949/1‑140 (MQ=255)

                                                                                cATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAagtagt                                                            >  2:53798/1‑140 (MQ=255)

                                                                                  tAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAag                                                                >  1:2570368/1‑134 (MQ=255)

                                                                                  tAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAag                                                                <  2:2570368/134‑1 (MQ=255)

                                                                                  tAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTc                                                          <  1:3233210/140‑1 (MQ=255)

                                                                                  tAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTc                                                          <  1:1413613/140‑1 (MQ=255)

                                                                                  tAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGACCGCTTGGAAGCTTTATTATATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTc                                                          <  1:3209196/140‑1 (MQ=255)

                                                                                    gCTCAGCAGGTAGAGCCCTGCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAg                                                        <  2:1996799/140‑1 (MQ=255)

                                                                                       cagcagGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTgg                                                     <  2:1830540/140‑1 (MQ=255)

                                                                                       cagcagGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTgg                                                     <  1:1465618/140‑1 (MQ=255)

                                                                                       cagcagGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTgg                                                     <  1:621974/140‑1 (MQ=255)

                                                                                              tAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAaca                                              <  2:2723484/140‑1 (MQ=255)

                                                                                               agagCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAacac                                             >  1:1069981/1‑140 (MQ=255)

                                                                                                 agCACTTCCATGGTAATGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAAcacca                                           <  1:3048969/140‑1 (MQ=255)

                                                                                                     cTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCtt                                       >  1:3026240/1‑140 (MQ=255)

                                                                                                     cTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCtt                                       >  1:3353703/1‑140 (MQ=255)

                                                                                                      ttCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGtt                                                           <  2:3288273/119‑1 (MQ=255)

                                                                                                        ccttGGTAAGTAAGAGGTGAGCTGTTCGAGCCGGCTTGGAAGATTTATTAAATGTATTATTACCAAGGTTTCTCAAAAATGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGcc                                    <  1:132097/137‑1 (MQ=38)

                                                                                                        ccATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGcc                                    >  2:2072408/1‑140 (MQ=255)

                                                                                                        ccATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGcc                                    >  1:29783/1‑140 (MQ=255)

                                                                                                        ccATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGcc                                    >  1:1811981/1‑140 (MQ=255)

                                                                                                        ccATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATGACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATGGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGcc                                    <  1:2654447/140‑1 (MQ=255)

                                                                                                           tGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTGGGAAGCTGTATTAAATGTATTATTACAAAGGTTTCTCAAAAAGGAGAAAGCTTTATTTATTGGGATATGCGGAAGTAGTTCAGTGGAGGAAAACCACCTTGCCAAg                                 >  1:1769814/1‑140 (MQ=255)

                                                                                                                aGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGTGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTggg                            >  2:848579/1‑140 (MQ=255)

                                                                                                                aGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTggg                            >  2:3004272/1‑140 (MQ=255)

                                                                                                                aGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTggg                            >  1:1900198/1‑140 (MQ=255)

                                                                                                                aGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTggg                            >  1:709829/1‑140 (MQ=255)

                                                                                                                aGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTggg                            >  1:780295/1‑140 (MQ=255)

                                                                                                                aGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTggg                            >  2:2806431/1‑140 (MQ=255)

                                                                                                                aGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTggg                            >  1:2609596/1‑140 (MQ=255)

                                                                                                                  gAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTggggg                          >  1:201483/1‑140 (MQ=255)

                                                                                                                       ggTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCAGCTTGCCAAGGTGGGGGTcgcg                     >  1:2898445/1‑140 (MQ=255)

                                                                                                                       ggTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGTcgcg                     >  1:2181214/1‑140 (MQ=255)

                                                                                                                       ggTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGTcgcg                     >  2:2981242/1‑140 (MQ=255)

                                                                                                                        gTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGTCGCgg                    >  1:2268788/1‑140 (MQ=255)

                                                                                                                        gTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGTCGCgg                    >  2:2302363/1‑140 (MQ=255)

                                                                                                                                  cGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGTCGCGGGTTCGAATcc          >  2:2165773/1‑140 (MQ=255)

                                                                                                                                   gAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGTCGCGGGTTCGAATccc         <  2:1589138/140‑1 (MQ=255)

                                                                                                                                          cTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGTCGCGGGTTCGAATCCCGTCTTcc  >  2:3107547/1‑140 (MQ=255)

CGCAGTAGCTCAGTGGTAGAGCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGTCGCGGGTTCGAATCCCGTCTTCC  >  NZ_CP034943/165617‑165894

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.