Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0349431,366,1090GT24.5% 307.5 / 14.2 170D203Y (GAT→TAT) EO946_RS07135PepSY domain‑containing protein
Reads supporting (aligned to +/- strand):  ref base G (76/47);  new base T (0/40);  total (76/94)
Fisher's exact test for biased strand distribution p-value = 5.23e-14
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 178 total aligned reads displayed.

ATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCA‑TTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATACA  >  NZ_CP034943/1365972‑1366248
                                                                                                                                          |                                                                                                                                           
aTCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCA‑TTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGTATGTTGATCTTCCGgatgat                                                                                                                                           <  1:2311788/140‑1 (MQ=255)
     caaAAAACACCGATTACGAAAAAAGAAGCCAAAACCA‑TTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAaaga                                                                                                                                      >  1:2931962/1‑140 (MQ=255)
     caaAAAACACCGATTACGAAAAAAGAAGCCAAAACCA‑TTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAaaga                                                                                                                                      >  2:2538996/1‑140 (MQ=255)
          aaCACCGATTACGAAAAAAGAAGCCAAAACCA‑TTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGa                                                                                                                                 >  1:2450299/1‑140 (MQ=255)
          aaCACCGATTACGAAAAAAGAAGCCAAAACCA‑TTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGa                                                                                                                                 >  1:2288540/1‑140 (MQ=255)
             acCGATTACGAAAAAAGAAGCCAAAACCA‑TTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACtg                                                                                                                              >  1:1546390/1‑140 (MQ=255)
             acCGATTACGAAAAAAGAAGCCAAAACCA‑TTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACtg                                                                                                                              >  2:1629273/1‑140 (MQ=255)
               ctataaCGAAAAAACAAGCCAAACCCA‑TTGCTGAGCTAGAAACGGGCGGTAAAGCGTATGACGCAGATCTCGAAAAAAGTGCGGGCACTCTAATTTTTTATGTGGATTTTTATCTTCGGGATTATAAACAAGCGACtgtg                                                                                                                            <  2:2653152/135‑1 (MQ=255)
               cGATTACGAAAAAAGAAGCCAAAACCA‑TTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACtgtg                                                                                                                            >  1:2561168/1‑140 (MQ=255)
                     ccaaaaacTAAGCAAAAACAT‑TGGCTGAGCGAGAAACGGGCGGGACAGCGTATGACGCACTACTCGAAAAAAGTCAGGGCAATATCATATTTTAATTGTATGTTGATCTGCCGGAGGAAAACGAAGCGACTGTGAAAAtt                                                                                                                      <  2:2525265/138‑1 (MQ=255)
                     ccaaaaaaCAAGCAAAAACCT‑TTCATTAGCGAGAAAGGGGCGGGACCCCGGATGCCGCAGATATCTAAAAAAGTGAGGCAAATCACATCTTTTATGTTGATGTTTATCTCCCGGATAATAAAGAAGCGACTGTGAAAAtt                                                                                                                      <  2:79806/138‑1 (MQ=255)
                     ccaaaaaaCAAGCAAAAACCA‑TTGCTGAGCGAGAACCGGGGGGGACTGCGTATCACGCAGATCTCGAAAAAAGTGTGGGCACTCTAATATTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAAtt                                                                                                                      <  2:1495654/138‑1 (MQ=255)
                     cGAAAAAAGAACCCAAAACAC‑TTGCTGAGCGAGAAAGGGGGGGGACAGCGGTTGCCGAATAAAGCCAAAAATGTCTGGGCACACTCATGTTTTACGGGGTGGTTTATCTTCGGGTTGTTAAAGAAGCGACTGTGAAAAtt                                                                                                                      <  2:445061/140‑1 (MQ=255)
                      taaaaaaCAACCAAAAACCA‑TGGCTGACCCATAAACGGGCGGCACAGGGGATGACCCAGTTCTCCAAAAAAGGGAGGCCACTCTAATTTTTGATGTGGTTTTTGATCTTCCGTATTATAACCAAGCGACTGTGAAAATTa                                                                                                                     <  2:578888/139‑1 (MQ=255)
                             gaagCAAAACCCT‑TGGGTGAGCTACAACCGGGCGGGACAGCGGATGACGCAGATCTCTAAAAATGTGTGGGCACTCTCATTTTTTAAGTGTTTGTTGTTCTTCCGGATGATAAAGACGCGACTGTGAAAATTAATGCCTa                                                                                                              <  2:120667/140‑1 (MQ=255)
                               aaccAAAACCATTTGCTGAGCGATAACGGGGCGGGACAGCGGATGACGCAGATCTCGAAAAATGTGAGCGCAGTCTCATCTTTGAAGTGTTTGTTGATCTTCCGGATTATAAAGAAGCGACTGTGAAAATTAATGCCTac                                                                                                             <  2:2188825/138‑1 (MQ=255)
                                      acccagggCTGCGCTAGAACCGGGCGGCACCGGGTATGACGCAGATATCTAAAAAAGTGAGGCCACTCTAATCTTTGAAGTGGATGTTGATCTTCCGTATGATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGaa                                                                                                      <  2:1813139/133‑1 (MQ=255)
                                       ccA‑TTGCTGAGCGATAACCGGGGGGGACAGGGTATGACGCAGATCTCGAAAAAAGTGAGGCCACTCTAATCTTTGAAGTGTAGGTTGATCTTCCGGATGATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAg                                                                                                    <  2:313312/140‑1 (MQ=255)
                                            tGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGgatgat                                                                                                                                           >  1:2080314/1‑97 (MQ=255)
                                              gtGAGCGAGAACGGGGCGGGACCGGGTTTGCCGCATATCTCTAAAAAAGTGAGGGCACTCTATTTTTTTATGTGGTTGTTGATCTTCCGGTTGATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa                                                                                              <  1:1868113/139‑1 (MQ=255)
                                              cTGAGCGACAACCGGGCGGGACCGCGGTTGACGCAGATCTCGAAAAAAGTGAGGCCACTCTCATTTTTGATGTGTTTTTTGATCTTCCGTATTATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa                                                                                              <  1:1016925/140‑1 (MQ=255)
                                                gcgCGACAAACGGGCGGGACCGCGGATGACGCAGATATCGAAAAAAGTGAGGGCACTCTCATCTTTGATGTGTATGTTGATATTCCGGATGATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCaaa                                                                                            <  2:134620/138‑1 (MQ=255)
                                                 aGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAAc                                                                                           >  2:144361/1‑140 (MQ=255)
                                                 aGCGAGAAACGGGCGGGACAGCGGATGACGCAGATATCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATATTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAACGTTGCAAAc                                                                                           >  2:1686166/1‑140 (MQ=255)
                                                  gCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGTGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa                                                                                          >  1:414099/1‑140 (MQ=255)
                                                  gCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa                                                                                          >  1:1628759/1‑140 (MQ=255)
                                                  ccGACAACCGGGGGGGACACCGTATCACGAATAACCCCAAAAAAGGTAGGCCACAAAAATCTTTGATGTGTTTGTTCATCTTCGGTATTATAAACCCGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa                                                                                          <  1:1471616/139‑1 (MQ=255)
                                                   cGAGAACGGGGCGGTACAGCGTATGAGGCAGATCTCTAAAAATGTGAGGGCCCTGTCATCTTTGAGGTGTATTTTGATGTTGCGTTTTATAACCACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAt                                                                                         <  2:2814088/140‑1 (MQ=255)
                                                   cGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAt                                                                                         >  1:1180405/1‑140 (MQ=255)
                                                   cGACAAACGGGGGGGACAGCGTATGACGCCCATCCCAAAAAATGTGAGGCCACTCTAATCTTTTATGTGGTTGTTGATCTTCCGGATGATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAt                                                                                         <  1:2257427/140‑1 (MQ=255)
                                                    gagaACCGGGCGGGACAGCGGAGTACGAAGATCTCGAAAAAATTGAGCGCACTCTCAGATTTTAAGTGGATTTTGATCTTCCGGATTATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAtt                                                                                        <  2:2605902/140‑1 (MQ=255)
                                                    gagaACCGGGCGGCACCGCGGATGACGCAGATCTCGAAAAAAGTGAGGCCACTCTCATCTTTGAAGTGGTTGTTGATCTTCCGGATTATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAtt                                                                                        <  2:490697/140‑1 (MQ=255)
                                                    gagaACCGGGCGGCACAGCGGAGGACGCACATATCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAtt                                                                                        <  2:3235155/140‑1 (MQ=255)
                                                      gaAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATtgt                                                                                      >  2:961463/1‑140 (MQ=255)
                                                        acggggcggcACAGCGGATCACGCCGATCTCTAAAAACGTGAGGCCACTCTAATATTTGACGGGGTTTTTGATCTTCGGTATGAAAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTgtgt                                                                                    <  1:2833446/137‑1 (MQ=255)
                                                          cgggcgggACTGCGTATGACGTATTTGTCGAAAAATGTGAGGGCACTCTCTTATTTGAAGTGGTGGTGGATCTCCCGGATGTTAAAGACGCGACTGTGAACATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTAt                                                                                  <  2:744383/140‑1 (MQ=255)
                                                          cgggcgggACAGCGGTTGACGCATATATCGAAAAAAGTGAGGGCACTCAAATCTTTTAAGTGGATGTTGATCTTCCGGATTATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTAt                                                                                  <  2:272587/140‑1 (MQ=255)
                                                          cgggcggcACCGCGTATGCCCCATAACTGTAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAATAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTAt                                                                                  <  2:2311660/140‑1 (MQ=255)
                                                           gggcggcACAGCGTATGACGCATATCTCGAAAAAAGTGAGGCCACTATCATATTTGAAGTGTTTGTTGATCTTCCGGATTATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATg                                                                                 <  2:423354/140‑1 (MQ=255)
                                                               ggtaCAGGGGATCCCGCACATCACTAAAAAATTGAGGGCACTCTAATCTTTGATGTGGATTTTGATCTCCCGGATTATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGa                                                                             <  1:944758/137‑1 (MQ=255)
                                                               gggACCGCGGATGACGCATCTCTCCAAAAAAGTGTGGGCACTATCATCTTTGAAGTGGATTTTGATCTTCCGGTTGATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGa                                                                             <  1:3366902/140‑1 (MQ=255)
                                                               gggACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTAATCTTTGAAGTGGATGTGGATCTGCGGGATGATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGa                                                                             <  2:2533151/140‑1 (MQ=255)
                                                               gggACAGCGGATGACCCATATCTCTAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGAGTATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGa                                                                             <  2:1555195/140‑1 (MQ=255)
                                                               gggAAAGCGTATGACGAATAACTCGAAAAAAGTGAGGGCACTCTAATCTTTGAAGTGGTTGTTGATGTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGa                                                                             <  2:3063626/140‑1 (MQ=255)
                                                               ggcaCAGCGGATGACGCAGAGCTCTAAAAAAGTGAGGCCACTCTCATATTTGAAGGGGATGTTGATCTTCCGGATGATAACGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGa                                                                             <  2:314279/137‑1 (MQ=255)
                                                                ggACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGAc                                                                            >  1:1904164/1‑140 (MQ=255)
                                                                    cgcgcATGCCGCAGATCCCCAAAAAAGGCCGGCCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGCAGTATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGAc                                                                        <  2:1904164/139‑1 (MQ=255)
                                                                      cGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACgg                                                                      >  1:1124214/1‑140 (MQ=255)
                                                                      cGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGAGGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACgg                                                                      >  1:1341705/1‑140 (MQ=255)
                                                                          tcaCGCAGATCTCCAAAAAAGTGAGGCCACTCTAATCTTTGAAGTGTTTGTTTATCTTCCGGATTATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTtc                                                                  <  1:2400769/138‑1 (MQ=255)
                                                                          tGACGCATATCTCCAAAAAAGTGAGGGAACTCTCATATTTGACGTGGATTTTGATCTTCCGTATGATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTtc                                                                  <  2:537117/140‑1 (MQ=255)
                                                                          tGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTtc                                                                  <  2:2931962/140‑1 (MQ=255)
                                                                           gACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGACAGGTTGCAAACATTGTGTATGAGGACTGACGGGTtct                                                                 >  1:164602/1‑140 (MQ=255)
                                                                           gACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa                                                                                          <  2:1802064/115‑1 (MQ=255)
                                                                           gACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTtct                                                                 >  1:552951/1‑140 (MQ=255)
                                                                           gACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTtct                                                                 >  1:3161180/1‑140 (MQ=255)
                                                                           gACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTtct                                                                 >  1:175900/1‑140 (MQ=255)
                                                                              gCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCtcag                                                              >  1:2526689/1‑139 (MQ=255)
                                                                               cacaactcCAAAAAAGTGAGGCCAAACTAATATTTGATGGGTATGTTGATCTTCCGTATCATAACCACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCtcatc                                                             <  1:2220745/135‑1 (MQ=255)
                                                                               cAGATCTCTAAAAAAGTGAGGGCACTCTCATCTTTTATGTGTTTGTTGATCTTCCGGATTATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCtcatc                                                             <  1:2433314/140‑1 (MQ=255)
                                                                                  aTCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCaaa                                                          >  1:2722150/1‑140 (MQ=255)
                                                                                  aTCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCaaa                                                          >  2:1049748/1‑140 (MQ=255)
                                                                                      cGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGTGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATtct                                                      <  2:414099/140‑1 (MQ=255)
                                                                                       gAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATtctc                                                     >  1:1599613/1‑140 (MQ=255)
                                                                                        aaaaatGTGAGGCCACTCTCATTTTTTAAGTGTATGTTTATCTTCCGGATTATAACGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCa                                                    <  2:412253/140‑1 (MQ=255)
                                                                                         aaaatGTGAGGGAACTGTCATCTTTTAAGTGGATGTTGAATTTCGGGATTATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCAt                                                   <  2:949318/140‑1 (MQ=255)
                                                                                                        tctaATCTTTGATGTGTATGTTGATCTTCCGGATTATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTc                                    <  2:2288540/140‑1 (MQ=255)
                                                                                                        agtcATCTTTTATTTGCTTGTTGATCTTCCTGATGAAAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTc                                    <  2:451552/138‑1 (MQ=255)
                                                                                                             tCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa                                                                                          >  1:1592193/1‑81 (MQ=255)
                                                                                                             tCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa                                                                                          <  2:1592193/81‑1 (MQ=255)
                                                                                                             tCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTc                               >  1:2693177/1‑140 (MQ=255)
                                                                                                                  gAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGtt                          >  2:1733254/1‑140 (MQ=255)
                                                                                                                  gAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGtt                          >  2:1886036/1‑140 (MQ=255)
                                                                                                                  gAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGtt                          >  1:1973017/1‑140 (MQ=255)
                                                                                                                   atgtgtttGTTGATCTCCGGCATTATAAACCAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTg                         <  1:1132988/133‑1 (MQ=255)
                                                                                                                   aaggcgATGTTTATCGTCCGTATCATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTg                         <  2:2036520/135‑1 (MQ=255)
                                                                                                                   aaGTGTTTGTTGATCTTCCTTATGATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTg                         <  2:2450299/140‑1 (MQ=255)
                                                                                                                   aaGTGTATGTTGATGGTCCGCATCAAAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTg                         <  1:1172758/140‑1 (MQ=255)
                                                                                                                   aaGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTg                         <  2:1124214/140‑1 (MQ=255)
                                                                                                                   aaGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTg                         <  2:1973017/140‑1 (MQ=255)
                                                                                                                     ttgtattttGATATTCCGGTTTATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAg                       <  1:2778868/133‑1 (MQ=255)
                                                                                                                     gTGGATGTTTATTGTCCGGATTATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAg                       <  2:3086810/140‑1 (MQ=255)
                                                                                                                     gTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAg                       <  2:1599613/140‑1 (MQ=255)
                                                                                                                      tGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgt                      >  1:968090/1‑140 (MQ=255)
                                                                                                                      tGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgt                      >  1:3114102/1‑140 (MQ=255)
                                                                                                                        gATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCttt                                               >  1:1476724/1‑113 (MQ=255)
                                                                                                                        gATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgt                    >  1:298427/1‑140 (MQ=255)
                                                                                                                        gATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgt                    >  1:141887/1‑140 (MQ=255)
                                                                                                                        gATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgt                    >  2:2732051/1‑140 (MQ=255)
                                                                                                                        gATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgt                    >  1:2209252/1‑140 (MQ=255)
                                                                                                                        gATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCACATCTTTCTCACGTTTTACTTTCATGTTGAgtgt                    >  2:1941971/1‑140 (MQ=255)
                                                                                                                                tCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTg            >  2:862414/1‑140 (MQ=255)
                                                                                                                                  ttCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGaa          >  2:2862499/1‑140 (MQ=255)
                                                                                                                                  ttCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGaa          >  1:1192978/1‑140 (MQ=255)
                                                                                                                                   tCCGGATTATAACCACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAAc         <  1:182347/140‑1 (MQ=255)
                                                                                                                                   tCCGCATGAAAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAAc         <  1:2538996/140‑1 (MQ=255)
                                                                                                                                    ccGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACt        >  2:2052512/1‑140 (MQ=255)
                                                                                                                                    ccGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACt        >  1:2396666/1‑140 (MQ=255)
                                                                                                                                       gatgatAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCAt     >  1:1059723/1‑140 (MQ=255)
                                                                                                                                        atgatAAAGAAGAGACTGTGAAAATTAATGACTACACCGTAAAGTTTGCAAACATTGTGTTTGATGACTGACGGGTTATAATCAAATTCTTATCTTTATCTCGTTTTCCTTTCATGTTGATTGTGTAAACTGAACTCATa    <  2:800760/140‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                           
ATCAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCA‑TTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATACA  >  NZ_CP034943/1365972‑1366248

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑