BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	607479 =	224 (1.120)	3 (0.020)	3/218	9.2	1.9%	coding (322/1125 nt)	EO946_RS03185	collagen‑like protein
*	?	NZ_CP034943	= 607604	133 (0.820)	3 (0.020)	3/218	9.2	1.9%	coding (447/1125 nt)	EO946_RS03185	collagen‑like protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 156 total aligned reads displayed.

CGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGA  >  NZ_CP034943/607465‑607742

cgccccgagcgacaggagcgacaggagcTCCCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGcc                                                                                                                                            <  2:2189553/134‑1 (MQ=255)

cgacaggagcgacaggagcgacaggagCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGcc                                                                                                                                            <  1:1337259/140‑1 (MQ=255)

ccacaggagcgacaggagccacagtagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGcc                                                                                                                                            <  1:1490869/138‑1 (MQ=255)

  accggagcgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCgg                                                                                                                                          <  1:378515/137‑1 (MQ=255)

  acaggagcgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCgg                                                                                                                                          <  1:3052269/140‑1 (MQ=255)

  acaggagcgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCgg                                                                                                                                          <  1:2108840/140‑1 (MQ=255)

    aggagcgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGCCTACGGGGGAAGCCGGAGCAGCCGGAg                                                                                                                                        >  2:2044466/1‑140 (MQ=255)

        gcgcccggagccaccggagcTCCCGGGGCAGCTGGACCAGCTGGAGCGCCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGAc                                                                                                                                    <  2:742242/134‑1 (MQ=21)

         cgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTCCCGGCGTAGCCGGACCAGCCTGTGCCACGGGAGCCACCGGGGCTACGGGGGAAGCCGGACCTGCCGGAGCGACa                                                                                                                                   >  1:3066289/1‑140 (MQ=21)

           acaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                                                                 >  2:2851876/1‑140 (MQ=255)

           acaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                                                                 <  1:2144457/140‑1 (MQ=255)

           acaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                                                                 >  2:407166/1‑140 (MQ=255)

           acaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGCGCCACGGGAGCCACAGGGGCTACGGGTGAAGCCGGACCACCCGGAGCGACAgg                                                                                                                                 >  2:2619876/1‑140 (MQ=21)

            caggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGACGACGGACCAGCCGGAGCGACAGGa                                                                                                                                >  1:1335213/1‑140 (MQ=255)

                agcgacagcagcTCCCGGCGCCCCTGGCCCCGCGGGCGGGACGGGAGCCACAGGAGCGCCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACCGGCGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGcga                                                                                                                            <  1:2823284/140‑3 (MQ=17)

                     ccggagcTCCCGGTCACGCGGGCCCAGCGGGAGCCACGGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAGCGGGCGCCACTGGAGCGACAGGGGCTACCGGTGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCggg                                                                                                                       <  2:749815/138‑1 (MQ=17)

                           cTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTCCTGGCGAAGCCGGAGCAGCCGGAGCGACAGGAGCTCCCGGGGAAGcc                                                                                                                 >  2:2922851/1‑140 (MQ=255)

                             aCCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTAGCGCGGAGGCCGCACGAGCCGGACCGACCGGAGCGACCGGGGACGCCgg                                                                                                               >  2:1179428/1‑140 (MQ=18)

                              ccGGGGACGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                                                              <  1:1227101/140‑1 (MQ=255)

                              ccGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                                                              <  1:1823185/140‑1 (MQ=255)

                                   gAAGCTGGACCAGCTGGAGCGACGGGAGGGACAGGAGCTACCGGGCAAGCCGGACCAGCCGGGGCCACGGGCGCCACAGGGGCTACGGGGGACGCCGGCGCAGCCGGAGCGGCGGGAGCGACCGGGGCCGccggcccggc                                                                                                         >  1:2971117/1‑140 (MQ=255)

                                   gAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACGGGGGAAGCCGGACCCGCCGGCGCCAGGGGAGCCACAGGGGCTACGGGGGCCGGGGGCCCGGCCGGGGCGGGAGGGGCTCCCGGGGAAGCCGGACCGGc                                                                                                         >  1:1002840/1‑140 (MQ=18)

                                    acgCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACGGGGGAAGCCGGACCCGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGcc                                                                                                        <  2:679470/138‑1 (MQ=255)

                                     cgcgggACCATCTGGAGAGACGGGAGCTACCGGAGCTCCAGGGGGAGCGGGAGCTTGCGGTGCCACGGGAGACACAGGGGCTACTGGGGTAGCCGTACCTGGCGGAGCGAGTGGAGATACCGGGGAAGCCGGACCAGCCg                                                                                                       <  2:822842/136‑1 (MQ=16)

                                      gCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                                                                                                      >  1:1570282/1‑140 (MQ=255)

                                      gCTGCACCAGCGGGAGCGACGGGAGCGACAGGAGCTACCGGGGACGCCCGACCAGCCGGGGCCACGGGCGCCACAGGGTCTCCTGGTGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                                                                                                      <  1:1311514/140‑1 (MQ=18)

                                        tGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGCCGGGAGCCACGGGGGCGACAGGCGCAGGCGGACCTGCCGGAGCGGCAGGCGGTGACGGGGAAGCCGTAACAGctccag                                                                                                    >  1:1377701/1‑135 (MQ=9)

                                           aCCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGa                                                                                                 >  2:1533206/1‑140 (MQ=255)

                                            ccAGCTGGAGCGACGGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGAc                                                                                                <  1:1533206/140‑1 (MQ=255)

                                              aGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAg                                                                                              <  2:1570282/140‑1 (MQ=255)

                                               gCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCCGCCGGAGCGACAGGAGCTCCCGGGGACGCCGGACCCGCCGGAGCGACCgg                                                                                             >  1:904312/1‑140 (MQ=17)

                                               ccgggAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                             <  1:1027128/137‑1 (MQ=255)

                                                cTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGa                                                                                            >  1:1729582/1‑140 (MQ=255)

                                                cTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACCGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCAACCGGGGACGCCGGACCAGCCGGAGCGACAGGa                                                                                            >  1:2820329/1‑140 (MQ=255)

                                                 tGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAg                                                                                           <  2:2702323/140‑1 (MQ=255)

                                                         cGGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCACCCGGCGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCggg                                                                                   <  1:2364934/140‑1 (MQ=255)

                                                         cGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCggg                                                                                   >  1:1869529/1‑140 (MQ=255)

                                                             cgCGACAGGAGCTACCGGTGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                               <  1:1387278/139‑1 (MQ=255)

                                                             ccccaCAGGCGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGCGCCACTGGGGCGACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGTGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                               <  1:903240/136‑1 (MQ=17)

                                                              gCGACAGGAGCCCCCGGCGCAGCCGGACCCCCCGGCGCCACAGGAGCCACCGGCGCTCCTGGAGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGc                                                                              <  2:2605781/140‑1 (MQ=17)

                                                                  cagcagCTCCCGGCGCAGCCGGCCCACCCCGGGCCCCGGGAGCAACAGGCGCTCCTGGGGCAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                          <  1:624779/140‑1 (MQ=14)

                                                                       gCTACCGGGGCAGCCGGCCCAGCCGGGGCCACGGGAGCCACAGGGGCTCCTGGGGACGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAc                                                                     <  2:1026052/140‑1 (MQ=18)

                                                                        cTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAcc                                                                    >  1:683989/1‑140 (MQ=255)

                                                                        cTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGACGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGACGGACCAAcc                                                                    >  1:1975653/1‑140 (MQ=255)

                                                                          cccGGGGACGCCGGACCCGGCGGGGCCCCGGGAGCCACAGGGGCTACTGGGGAAGCGGGAGCACCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCgg                                                                  <  1:141492/139‑1 (MQ=17)

                                                                          aCCGGGGAAGCCGGACCAGCCGGGGCGACGGGAGCCACAGGGGCTACTGGGCAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCACCGGGAGCGACAGGAGCGACCAGCGCAGCCGGACCAAACgg                                                                  >  1:267191/1‑140 (MQ=14)

                                                                          aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTCCCGGGGAAGCCGG‑CCAAcccgg                                                                 >  2:2671260/1‑137 (MQ=255)

                                                                            cGGGGAAGCGGGTCCCGCCGGGGCCACGGGAGCCACCGGCGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGTGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAg                                                                <  2:41898/140‑1 (MQ=17)

                                                                                gAAGCCGGACCAGCCGGGGCCACGGGAGCCACGGGGGCGACAGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGATGCCGGACCAGGCGGAGCGACAGGAGCGACCGGCGCACCCGGAGCAACCGGAGCGAc                                                            >  2:497887/1‑140 (MQ=18)

                                                                                   gCCGGACCAGCCGGGGCCACGGGAGCCCCAGGGGCTACTGGGGAAGCCGGACCCGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAgg                                                         <  2:1517680/140‑1 (MQ=255)

                                                                                   gCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAgg                                                         <  2:948926/140‑1 (MQ=255)

                                                                                   gCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAgg                                                         <  2:2627037/140‑1 (MQ=255)

                                                                                   gCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCCGGGAAGCCGGACCAGCCCGAGCCACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAgg                                                         >  2:3067656/1‑140 (MQ=255)

                                                                                    ccGGACCAGCCGGGGCCACGGGAGCCCCAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGa                                                        <  1:1367381/140‑1 (MQ=255)

                                                                                     cGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAg                                                       <  2:1869529/140‑1 (MQ=255)

                                                                                     cGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACACTGAGCGACAGGAg                                                       >  2:3080708/1‑140 (MQ=255)

                                                                                        aCCAGCCGGGGCCACGGGAGCCACAGGGGCAACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTa                                                    >  1:2947593/1‑140 (MQ=255)

                                                                                            cccGGGGCCTCGGGAGCCACAGCGGCTACTGGGGAATCCGGACCAGCCGGAGCGACAGGAGCTACCGGTCAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCgg                                                <  1:867019/139‑1 (MQ=17)

                                                                                             ccGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCACCCGGAGCGACCGGAGCTACCggg                                               >  2:2307056/1‑140 (MQ=255)

                                                                                             ccGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACTGGAGCCACCggg                                               >  1:2446482/1‑140 (MQ=255)

                                                                                             ccGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCggg                                               >  1:1687799/1‑140 (MQ=255)

                                                                                             ccGGCGCCACGGGAGCCACCGGGGCTACGGGGGAAGCCGGACCAGCCGGCGCGACCGGCGCTACCGGGGACGCCCGACCACCCGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCggg                                               <  1:100219/140‑1 (MQ=14)

                                                                                                 ggCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAg                                                                                              >  2:1506582/1‑89 (MQ=255)

                                                                                                 ggCCACCGGAGCCACGGGCGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAg                                           <  1:855621/140‑1 (MQ=255)

                                                                                                 cgCCACGGGCGCAACAGGCCCTACTGGCGAACCCGGAGCACCCGGAGCCACAGGAGCTCCCGGTGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAg                                           <  1:567289/139‑1 (MQ=14)

                                                                                                  gCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGc                                          <  1:2027696/140‑1 (MQ=255)

                                                                                                      cGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAg                                                       >  1:2664171/1‑123 (MQ=255)

                                                                                                      cGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAg                                                       <  2:2664171/123‑1 (MQ=255)

                                                                                                      cGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                      <  2:683989/140‑1 (MQ=255)

                                                                                                      cGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                      >  2:528306/1‑140 (MQ=255)

                                                                                                       gggAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                                                                                        >  1:576835/1‑89 (MQ=255)

                                                                                                       gggAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                                                                                        <  2:576835/89‑1 (MQ=255)

                                                                                                       gggAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGCGCGACAGGAGCTCCCGGGGAAGCCGGAc                                     >  1:768086/1‑140 (MQ=255)

                                                                                                       gggAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                     >  2:956965/1‑140 (MQ=255)

                                                                                                       gggAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                     <  1:98617/140‑1 (MQ=255)

                                                                                                       gggAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                     >  1:205857/1‑140 (MQ=255)

                                                                                                              acaGGGGCTAGTGGGTAAGCCGGACCAGCCGGAGCGACTGGAGCTACGGGTGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                              <  1:48231/140‑1 (MQ=14)

                                                                                                                      tACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAg                      <  1:3038634/140‑1 (MQ=255)

                                                                                                                       aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGc                                                                                                                  >  1:709279/1‑47 (MQ=38)

                                                                                                                       aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGc                                                                                                                  <  2:709279/47‑1 (MQ=38)

                                                                                                                       aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGCGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                     >  1:2570852/1‑140 (MQ=255)

                                                                                                                       aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGAGACAGGAGCTACCGCGGAAGCCGGACCAACCGGAGCGACAGGAGCTCCCGGGGAAGCCGGGCCGGCCGGAGCGACCgg                     >  1:2338294/1‑140 (MQ=14)

                                                                                                                            cgAAGCGGGAGCTGCCGGCGCGCCAGGCCGTTCCGGAGAAGCCGGAGCACCAGGAGCAACAGGAGCTCCCGGCGAAGCCGGACCAACCGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                <  1:2203425/139‑1 (MQ=14)

                                                                                                                              aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTAcc              >  1:358322/1‑140 (MQ=255)

                                                                                                                              aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTAcc              >  1:2182714/1‑140 (MQ=255)

                                                                                                                              aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCCAcg              >  1:928548/1‑139 (MQ=37)

                                                                                                                                gCCGGACCAGCCGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGCGCTCCCGGGGACGCCGGACCAACCGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTCCCgg            >  1:2530804/1‑140 (MQ=14)

                                                                                                                                gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCgg            >  2:941178/1‑140 (MQ=255)

                                                                                                                                gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAACCCGGACCAGCCGGAGCGACAGGAGCTACAGGGGCAGCCGGACAAACCGGAGCGAGAGGACCAACAGGGGCACCCGGAAAACCCGGAGCGACAGGAGCGACCgg            >  2:876512/1‑140 (MQ=14)

                                                                                                                                 gcGGACCCGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCggg           <  2:2570852/139‑1 (MQ=255)

                                                                                                                                  cGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCgggg          >  1:1864231/1‑140 (MQ=255)

                                                                                                                                  cGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGATCAACCGGGGCAGCCGGACCAAACGTACCGACAGTAGCGACCGGAGAAGCCGGACCATGCGGAGCGACAGGAGCTACAgggg          >  2:362638/1‑140 (MQ=11)

                                                                                                                                     ccccgCCGGAGCGACCGGCGCCACCGGCGCAGCCGGACCACCCGGCGCGACAGGAGCTCCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg       <  1:2094045/136‑1 (MQ=14)

                                                                                                                                     cccACCCGCAGCGACCGGCGCTCCCGGCGAAGCCGGACCACCCGGAGCCACAGGCGCTCCCGGGGCCGCCGGACCAACCGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg       <  1:744698/139‑1 (MQ=14)

                                                                                                                                     aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGacg       >  2:2800712/1‑138 (MQ=255)

                                                                                                                                      ccAGCCGGAGCGACAGGCGCTCCCGGGGCAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGc      <  1:1090082/140‑1 (MQ=255)

                                                                                                                                        aGCCGGAGCGACAGGAGCTCCCGGGGCAGCCGGACCATCCGGAGCGACAGGAGCGCCCGGGGACGCCGGACCAACCGGTGCGACAGGAGCTACCGGCGCAGCCGGCGCCGCCGGAGCGACAGGAGCTCCCGGGGACGCCg    >  1:1951884/1‑140 (MQ=14)

                                                                                                                                         cccGGAGCACCAGGCGCTACGGGCGATGCAGGAGCCCCCGGAGCGACCGGGGCGTCCGGCGCAGCCGGAGCTACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCgg   <  1:302836/139‑1 (MQ=2)

                                                                                                                                          ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGa  >  2:864813/1‑140 (MQ=255)

                                                                                                                                          ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGAGCGACCGTAGCGCCCGGGGACGCCGGACCAGCCGGAGCCACAGCAGCACCCGCCGACGCCGGa  >  2:1235027/1‑140 (MQ=11)

CGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGA  >  NZ_CP034943/607465‑607742

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.