Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0349431,730,0750GC27.8% 228.0 / 25.6 126E166Q (GAA→CAA) rodZcell shape determination protein RodZ
Reads supporting (aligned to +/- strand):  ref base G (54/29);  new base C (0/32);  total (54/72)
Fisher's exact test for biased strand distribution p-value = 1.01e-11
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 134 total aligned reads displayed.

GCGATGGTAACAATGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAGTTC  >  NZ_CP034943/1729938‑1730211
                                                                                                                                          |                                                                                                                                        
gCGATGGTAACAATGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACgaaagaa                                                                                                                                        >  2:1180096/1‑140 (MQ=255)
gCGATGGTAACAATGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACgaaagaa                                                                                                                                        >  2:1252187/1‑140 (MQ=255)
gCGATGGTAACAATGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACgaaagaa                                                                                                                                        >  2:581887/1‑140 (MQ=255)
gCGATGGTAACAATGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACgaaagaa                                                                                                                                        >  1:798009/1‑140 (MQ=255)
 cGATGGTAACAATGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACgaaagaaa                                                                                                                                       >  1:2032179/1‑140 (MQ=255)
 cGATGGTAACAATGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACgaaagaaa                                                                                                                                       >  1:614067/1‑140 (MQ=255)
         aCAATGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGAt                                                                                                                               >  1:2209534/1‑140 (MQ=255)
          cAATGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATa                                                                                                                              <  1:2570013/140‑1 (MQ=255)
          cAATGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATa                                                                                                                              <  1:533067/140‑1 (MQ=255)
            aTGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATaac                                                                                                                            >  2:2419399/1‑139 (MQ=255)
             tGCCTCATCTGAAAAATCAATTACTCAAAGTGAAAGCAAGTAAGAAATCCCAAAAGATTCAACGCTAAAAGATAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATaaaa                                                                                                                           <  1:2548334/140‑1 (MQ=255)
             tGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATaaaa                                                                                                                           >  2:270782/1‑140 (MQ=255)
             tGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATaaaa                                                                                                                           <  1:4536/140‑1 (MQ=255)
             tGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATaaaa                                                                                                                           >  1:1192675/1‑140 (MQ=255)
               ccGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATaaaaaa                                                                                                                         >  1:2937267/1‑140 (MQ=255)
               ccGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATaaaaaa                                                                                                                         >  2:165194/1‑140 (MQ=255)
               ccGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGAAACA‑GCTCTGAAAAATAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATaaaaaa                                                                                                                         >  2:1885598/1‑140 (MQ=255)
                 gCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAaaga                                                                                                                       >  1:256444/1‑140 (MQ=255)
                  cATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAaagaa                                                                                                                      >  2:2230241/1‑140 (MQ=255)
                  cATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAaagaa                                                                                                                      >  1:8174/1‑140 (MQ=255)
                  aatatGAAAAATCAATTACTCAAAGTGAAAGCAATTACTAAATCCAAAAAGTTTCAACGATAAAAGTGAATAAAAGCAACA‑GCTCTGAAAAAGAGGAAGAAACTAAAAAAGAATCGAAATAAAAACAATATAAAAatgaa                                                                                                                      <  2:697348/136‑1 (MQ=255)
                    tCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCATACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAagaaga                                                                                                                    >  2:1481162/1‑140 (MQ=255)
                     cTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAgaagaa                                                                                                                   >  1:613991/1‑140 (MQ=255)
                     cTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAgaagaa                                                                                                                   >  1:1567272/1‑140 (MQ=255)
                       gAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAACGAAGAAAg                                                                                                                 >  2:2983010/1‑140 (MQ=255)
                                       aaatttaaaGAAATTACCAAATCCAAAAACATTAAACGAAAAAAGACAATAAACCAAACA‑GCACTCAAAAAGAGCCACAAACTAAAAAAAAAACCAAAAAAAAAAAACATAAAAAACAACACAGCGACAGTGATAAACTg                                                                                                 <  1:1180979/134‑1 (MQ=255)
                                       aaaGTCAAAGAAATTACTAAATCCAAAAATATTCAACGCTAAAAGATAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACAATAAAAAAGAAACGAAATAAAAAGAAGCTAAAAAAGACGAAAGCGACAGTGATAAACTg                                                                                                 <  2:208503/140‑1 (MQ=255)
                                         aGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGga                                                                                               >  1:2329263/1‑140 (MQ=255)
                                         aGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAACAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGga                                                                                               >  1:102359/1‑140 (MQ=255)
                                             aaaGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCCGACACTAAAAAAGAAACGAAAGAACAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGAtt                                                                                           >  1:2277218/1‑140 (MQ=255)
                                                tcAACTACAAAATCACAAAATATACAAGTCTAAATCATAATAAAAGAAACA‑GTTCTTAAAAAGAGCAACACACTAAAAATCAACCGAAAGAAAAACAAGAAAAAAAACAAGAAAGCGACAGTGATAAACTGGAGATTaaa                                                                                        <  1:2416339/139‑1 (MQ=255)
                                                   aGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCa                                                                                     >  1:975753/1‑140 (MQ=255)
                                                   aGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCa                                                                                     >  1:2207434/1‑140 (MQ=255)
                                                    gTACGAAATACAAAAAGATTCAACGATAAAAGATAATCAAAGCAACA‑GCTCTGAAAAACAGGCACACACTAAAAAAGAAACCAAAGAAAAACAACAAAAAAAACACCAAAGCGACAGTGATAAACTGGAGATTAAAGCaa                                                                                    <  2:321534/140‑1 (MQ=255)
                                                     tACTAAATCCAAAAATATTCAACTCTAACAGAGAATCAAAGCAACA‑CATGTGAAAACGAGCCAGACACTAAAAAACAAACCAAACAAAAACAAGATAAAAAACAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                   <  2:2679367/140‑1 (MQ=255)
                                                     tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                   >  1:2544162/1‑140 (MQ=255)
                                                     tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                   <  2:1405157/140‑1 (MQ=255)
                                                     tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                   >  1:1405157/1‑140 (MQ=255)
                                                     tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                   >  1:1627379/1‑140 (MQ=255)
                                                     tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                   >  2:1968369/1‑140 (MQ=255)
                                                     tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                   <  2:2937267/140‑1 (MQ=255)
                                                     aaccaaaTCCCAAAAGATACAACCATAAAACACAAAAAAACCACCA‑CATCTAAAAAACAGCAACAAAAAAAAAAAAAAACCAAACAAAAACAACAAAAAAACCAACAACGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                   <  1:1988736/136‑1 (MQ=255)
                                                     aaccaaaCCCCAAAAGATACAACCCAAAATGACAATCAAACCACCA‑TCAATTAAAAAGAGCCCGACAATAAAAAACAACCGAAACAAAAAGACCCAAAAAAACAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                   <  1:2636665/136‑1 (MQ=255)
                                                        aaaaaCCCAAAATATTCACCGCTAAAACAGAATAAAAGCAAAA‑CATTTTAAAAACAGCCAGACACTAAAAAAGAAACCAAACAAAAAGAAGATAAAAAATCCCAACGCGACAGTGATCAACTGGAGATTAAAGCAACTgg                                                                                <  1:1200900/139‑1 (MQ=255)
                                                        aaaaTCCAAAAATATTCACCGATAAAAGATAA‑AAAAACAACACGCTCTCAAAATGAGCCACACACTAAAAAATAAACCAAAGAAAAAGAACATAAAAAAGAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTgg                                                                                <  1:2160336/139‑1 (MQ=255)
                                                           aTCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCAc                                                                             >  1:67371/1‑140 (MQ=255)
                                                            tCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATACAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACt                                                                            >  1:3044873/1‑140 (MQ=255)
                                                            tCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACt                                                                            >  1:1962013/1‑140 (MQ=255)
                                                               cAAACGTTTCAACGCTAAAAGAGAATCAAAGCAAAC‑GCTCTGAAAAATAGGCAGACAATAAAAAAAAAACGAAAGAAAAAGACCATAAAAAACAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGaa                                                                         <  2:393842/140‑1 (MQ=255)
                                                               cAAAAGATTCAACTCTAAAAGAGAATAAAAGCAACA‑GCTCTTAAAAAGAGGCAGACACTAAAAAATAAACGAAACAAAAAGAAGATAAAAACGACGAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGaa                                                                         <  2:42514/140‑1 (MQ=255)
                                                               cAAAAGATTCAACGCTAAACGAGAATCAAAGCAACA‑GCTGTGAAAACGTGGCAGACACTAAAAAATAAACCAATGAAACAGAAGATAAAAAAGAAGAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGaa                                                                         <  2:402978/140‑1 (MQ=255)
                                                                 aaaGATTCAACGATAAAATACAATAAAAGAAACA‑GCTCTTAAAAAGAGGCAGACACTAAAAAAGAAACTAAACAAAAAGAAGATAAAAAACAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAgg                                                                       <  2:3001693/140‑1 (MQ=255)
                                                                  aataTTCAACGATAAAACACAATCAAACAAACA‑GCTCTGAAAATGAGGCAGATACTAAAAAATAAACGAAACAAAAAGAAGATAAAAAAGAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAggg                                                                      <  2:2406141/137‑1 (MQ=255)
                                                                  aacaTTCAACGCAAAAACATAATCAAACAAACA‑GCTCTCAAAAATAGGCACACAAAAAAAAAGAAACCAAACAAAAAGAAGATAAAAAACAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAggg                                                                      <  2:2706134/137‑1 (MQ=255)
                                                                          ccccTAAAACACAATCAACCCAACC‑GCTCTCAAAAACAGCCAGACAAAAAAAAACAAACCAAACAAAAACACTAAAAAAAAGAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACGGGCACTGAAGGGTCATTAAc                                                              <  1:933823/137‑1 (MQ=255)
                                                                          actcaaaaaGAAACTCAACGCAACC‑GATATTAAAAAGAGGAACAAACTAAAAAAAAAACTAAAAAAAAACAAAATAAAAAACAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                              <  1:933961/135‑1 (MQ=255)
                                                                          actatAAAACACAATCAAACAAACA‑CAACTTAAAAACAGCAAAAAAATAAAAAACAACCCAAAAAAAAACAACATAAAAAACAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                              <  1:2744791/136‑1 (MQ=255)
                                                                          actaaaaaaCACAATAAAAGAACCA‑GCTATTAAAAATAGCCACAAACAAAAAAACAAACAAAATAAAAAGAAGATAAACACCAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                              <  1:1866012/135‑1 (MQ=255)
                                                                          acccTAAAAGATAAACAAACAACCA‑GCTCTCAAAAACAGCAACAAAAAAAAAAACAAACCAAACAAAAAGAACAAAAAAAACACCAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                              <  1:718803/137‑1 (MQ=255)
                                                                          acacTAAAACACAAACAAACCAACA‑CCTCACAAAAAGAGCCACACACAAAAAAACAACCCAAACAAAAACAACAAAAAAAACAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                              <  1:2953257/137‑1 (MQ=255)
                                                                          aCGCTAAACGACAAACAAAGCAACC‑CCTCTCAAAAAGAGGAACACACAAAAAAAGAAACCAAACAAAAACAACATAAAAAACAAGAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                              <  1:2230241/140‑1 (MQ=255)
                                                                          aCGCTAAAAGAGAATCAAAGCAACA‑GCTATTAAAAAGAGGCATACACTAAAAAACAAACGAAAGAAAAACAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                              <  2:2914946/140‑1 (MQ=255)
                                                                          aCGATAAAAGACAATAAAAGCAACA‑GCTCTGAAAAAGAGGAAGACACTAAAAAAGAAACGAAACAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                              <  2:2527555/140‑1 (MQ=255)
                                                                              tAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGAAACTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGTTCATTAAAGACt                                                          >  2:1927549/1‑140 (MQ=255)
                                                                                    ataaTCAAACAAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAATAAAAAGAAGATAAAAAACAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGaa                                                    <  2:924550/138‑1 (MQ=255)
                                                                                    agaATAAAAGCAACA‑GCTCTTAAAAAGAGGCAGACACTAAAAAATAAACGAAACAAAAAGAAGATAAAAAAGACGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGaa                                                    <  2:1020307/140‑1 (MQ=255)
                                                                                    acaaTAAAAGCAACA‑GATCTCAAAAAGAGGAAGACACTAAAAAACAAACCAAAGAAAAAGAAGATAAAAAAGAAGAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGaa                                                    <  2:256444/138‑1 (MQ=255)
                                                                                    aaaacaaaaCCAACC‑GCTCTCAAAAACAGCCACACACTAAAAAACAACCCAACCAAAAACAACAAAAAAAACACCACCGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGaa                                                    <  1:2444069/134‑1 (MQ=255)
                                                                                      aaTCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgt                                                  >  1:453086/1‑140 (MQ=255)
                                                                                      aaTCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgt                                                  >  1:2487874/1‑140 (MQ=255)
                                                                                         cAAAGCAACC‑GCTCTGAAACAGAGCCACAAACTAAAAAAGAAACGCCAGAAAAACAAGATAAAAAAGAAGAACGCGACAGTGATAAACGGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTc                                               <  2:2955000/140‑1 (MQ=255)
                                                                                         aaaaGCAACA‑GCTCTGAACAAGAGGCAGACACTAAAAAAGAAACGAAACAAAAAGAAGATAAAAAAGACGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTc                                               <  2:1744366/139‑1 (MQ=255)
                                                                                                 cA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGgcgcct                                       >  1:1020307/1‑138 (MQ=255)
                                                                                                 cA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTg                                       >  2:2948995/1‑140 (MQ=255)
                                                                                                 cA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTg                                       >  2:1050865/1‑140 (MQ=255)
                                                                                                       ctGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGaaa                                  >  2:1222632/1‑140 (MQ=255)
                                                                                                          aaaaaGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTc                               >  1:146056/1‑140 (MQ=255)
                                                                                                          aaaaaGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTc                               >  2:3468/1‑140 (MQ=255)
                                                                                                              agagGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGc                           >  1:635323/1‑140 (MQ=255)
                                                                                                              agagGCACACACTAAAAAATAAACGAAAGAAAAAGAAGATAAAAAAGACGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGc                           <  2:2487874/140‑1 (MQ=255)
                                                                                                               gagGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAACTTCGAGCt                          >  1:2268023/1‑140 (MQ=255)
                                                                                                               gagGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCt                          >  1:2120089/1‑140 (MQ=255)
                                                                                                               gagGAAGACACTAAAAAATAAACCAAACAAAAACAACATAAAAAACAAGAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCt                          <  1:2897926/140‑1 (MQ=255)
                                                                                                                    aGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAAc                     >  2:214824/1‑140 (MQ=255)
                                                                                                                       cacTCAAAAAGAAACCAAAGAAAAATAAGATCAAAACGCAGAAACCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGCACGGa                  <  2:580089/140‑1 (MQ=255)
                                                                                                                       cacTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa                  <  2:613991/140‑1 (MQ=255)
                                                                                                                       cacTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa                  <  2:1567272/140‑1 (MQ=255)
                                                                                                                       cacTAAAAAACAAACGAAACAAACAGAAGATAAAAAACAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa                  <  1:1642750/140‑1 (MQ=255)
                                                                                                                       caatAAAAAAGAAACGAAACAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa                  <  1:1428946/137‑1 (MQ=255)
                                                                                                                       caatAAAAAACAAACGAAACAAAATCAATATAAAAAACAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa                  <  1:1134188/137‑1 (MQ=255)
                                                                                                                       aacTAAAAAAGAAACGAAAGAAAACCAAGATAAAAAACACGAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa                  <  2:117156/139‑1 (MQ=255)
                                                                                                                       aacTAAAAAACAAACTAAACAAAAACAAGATAAAAAACAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa                  <  1:581887/139‑1 (MQ=255)
                                                                                                                       aaatAAAAAATAAACCAAACAAAAAGAAGATAAAAACCAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa                  <  1:285597/137‑1 (MQ=255)
                                                                                                                                 taaaCGAAATAAAAAAAATAAAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGa        <  2:2207434/139‑1 (MQ=255)
                                                                                                                                 gAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGa        <  2:67371/140‑1 (MQ=255)
                                                                                                                                 gAAACCAAAGAAAAACAAGATAAAAAAGACGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGa        <  2:723649/140‑1 (MQ=255)
                                                                                                                                 caaaCGAACGAAAAATAAGATAAAAAACAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGa        <  2:55162/139‑1 (MQ=255)
                                                                                                                                  aaaCGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGAc       >  1:238557/1‑140 (MQ=255)
                                                                                                                                  aaaCGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGAc       >  2:954870/1‑140 (MQ=255)
                                                                                                                                    aCGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAg     >  2:1811136/1‑140 (MQ=255)
                                                                                                                                          |                                                                                                                                        
GCGATGGTAACAATGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACA‑GCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAGTTC  >  NZ_CP034943/1729938‑1730211

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑