Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP034943549,1440AC26.0% 262.8 / 27.4 150Q52H (CAA→CAC) EO946_RS02865PLP‑dependent aminotransferase family protein
Reads supporting (aligned to +/- strand):  ref base A (61/50);  new base C (1/38);  total (62/88)
Fisher's exact test for biased strand distribution p-value = 6.13e-10
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 159 total aligned reads displayed.

TTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAGCGCATCACCAAGTCAAGAA  >  NZ_CP034943/549005‑549282
                                                                                                                                           |                                                                                                                                          
ttttGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCaa                                                                                                                                            >  1:1346636/1‑140 (MQ=255)
 ttttattAGAAATCTGGATATTCCGATTTATCAGCAGCTTTATCGCTATTACAACGAAAACATGCATCCGGGGGTTATTAAAAAAGGAATGACGCTCCCTTCCAAACGACTCCTGGCTAGTCAGCTTACCACCAGTCaaa                                                                                                                                           <  2:2457287/134‑1 (MQ=255)
 ttttAATATAATTCTGTATATTCCGCTTTATCAGCAGCTTTATCGCTATTTAAAAGAAAACATGCATCTGGGGCTTATTAAAAATGTAATGAAGCTCCCTTCCAAAAGACTCCTGGCGATTCAGCTTTCCATCAGTCaaa                                                                                                                                           <  2:2143368/140‑1 (MQ=255)
 ttttAATATAAATCTGGATATTCCGCTTTATCAGCAGGTTTATCGCTATTTCAAAGAAAACATGAAGCAGGGGCGTATTCAAAATGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCAGCAGTCaaa                                                                                                                                           <  2:2693995/140‑1 (MQ=255)
 ttttAATAGAAATCTGTATATTCCGCTTTATCAGCAGATTTATCGATATTAAAAAGAAAACTTGAATCCGGGGCGTATTCAAAATGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCaaa                                                                                                                                           <  2:768438/140‑1 (MQ=255)
  tttattAGAAATGTGTTTATTCGGCTTTATCAGCAGCTTTACCGCTTTTTCAAATAAAACATGCATCTGGGGCGTATTCAAAACGGAATCCCGCTCCCTTCAAAACGACTCGTGCCGATTCAGATTGCCATCAGTCAAAc                                                                                                                                          <  2:359492/135‑1 (MQ=255)
  ttGAATATAAATCTGGATATTCCGATTTATCAGAATATTTATCGAAATTTCAAACAAAAAATCAACCCGGGGCGTATTCAAAAAGTATTGAAGCCCCGTTCCAAAAGCCTCCTGGCTAGTCAGCTTTCCATCAGTCacac                                                                                                                                          <  2:311531/140‑1 (MQ=255)
    taaTACAAATCTGGATTTACCGATTTATCAGCAGCTTTATCGCTATTAAAAAGAAAACTTGAATCAGGGGCGTATTAAACAAGCAATTAAGCCCCCTTCCAAAACACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGa                                                                                                                                        <  2:2228076/139‑1 (MQ=255)
    gagacataaTCTGGATATTCCGCTTTATCACAAGATTTAGCGATATTTCAAACAAAACATGCATCCGGGGCGTATACAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCACACGa                                                                                                                                        <  2:2712450/133‑1 (MQ=255)
    gAATATAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGATATTAAAAATAAAACATGCATCAGGGGCTTATTCAAAAAGCAATGACGCGCCCTTCCAAAACACTCCTGGCGAGTCAGCTTTCCAACATTCACACGa                                                                                                                                        <  2:130034/140‑1 (MQ=255)
       tataaaTCTGTATATTCCGCTTTATCCGCAGCTTTATCGATATTTCAAAGAAAACATGCATCAGGGGCTTATTAAAAAAGCAATGAAGCTCCCTTCAAAAAGACTCCGGGCGATTCAGCTTTCCATCAGTCAAACGACTg                                                                                                                                     <  2:745469/137‑1 (MQ=255)
       tAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTg                                                                                                                                     >  1:1921338/1‑140 (MQ=255)
            aTCTGCATATTCCGCTTTATCAGAAGCTTTATCGCTATTTCAAACAAAACATGCATCAGGGGCTTTTTAAAAAAGGATTGAAGCTCCCTACCAAAACCCTCCTGGCGAGACAGCTAACCAACAGTCAAACGACTGTAGaa                                                                                                                                <  2:2686997/140‑1 (MQ=255)
              gtgtatatTCCGTTTAATCAGCAGCTTTATCGATTTTTCAAATAAAAAATTCATCCGGGGCGTTTTCAAAAAGCAATTACGCTCCCTTCAAAAACACTCCTGGCCTGTAAGATTTCCATCAGTCAAACGACTGTAGAACg                                                                                                                              <  2:891266/136‑1 (MQ=255)
               tGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGt                                                                                                                             >  1:2168949/1‑140 (MQ=255)
               tGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGt                                                                                                                             >  1:1124348/1‑140 (MQ=255)
               tGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGt                                                                                                                             >  1:2343722/1‑140 (MQ=255)
                gtatatTCGTCTTTATAACCCGCTTTATCGCTATTTCAAACAAAACATCCATCAGGGGCTTATACAAAAAGGATTTAAGCGCCCTTCCAAACCACTCCTGGCCAGTCAGCTTTCCACCAGTCAAACGACTGTAGAACGTg                                                                                                                            <  1:664497/138‑1 (MQ=255)
                      tCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGtctgtctc                                                                                                                      >  1:2712450/1‑133 (MQ=255)
                      tCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGtctgtctc                                                                                                                      >  1:1753219/1‑133 (MQ=255)
                      tCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATg                                                                                                                      >  1:754977/1‑140 (MQ=255)
                        cGCTTTACCAGCAGCTTTATCTATATTACAAACAAAACATGAATCCGGGGCGTATTAAAAAAGGAATGACGCGCCCTTCAAAACCCCTCCGGGCGAGACCGCTTTCCATCCGACACACGACTGTAGAACGTGCCTATGaa                                                                                                                    <  1:337949/140‑1 (MQ=255)
                          cTTTATCAGAAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACa                                                                                                                  <  2:1883137/140‑1 (MQ=255)
                            ttttCAGCAGCTTTTTCGCTTTTTCAAATAAAACATGAATCCGGGGCGTATTAAAAAAGGAATGAAGCTCCCTTCCAAACGACTCCTGGCGAGACAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGc                                                                                                                <  2:2236810/137‑1 (MQ=255)
                            ttATAAGCAGCTTTATCGATATTAAAAATAAAACATGCATCCGGGGCGTATTAAAAAAGGAATGAAGCTCCCTTCCAAACGACTCCTGGCGAGTCAGCTTCCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGc                                                                                                                <  1:2434873/140‑1 (MQ=255)
                             tatacgcagcTTTACCGATATTTAAAACAAAACATGAATCCGGGGCGTATTAAAAAAGGAATCACGCTCCCTTCCAAAAGACCCCTGGCGAGTCAGCTTTCCAGCAGTCACACGACTGTAGAACGTGCCTATGAACAGCt                                                                                                               <  2:1312812/135‑1 (MQ=255)
                             tATCACCAGCTTTATCGCTATTTCAAATAAACCCTGCATCCGGGGCTTATTCAAAACCGAAGGAAGCCCACTTCAAAACCCCACCTGGCGAGTCAGCTTTCAACCCGCCAAACGACTGTAGAACGTGCCTATGAACAGCt                                                                                                               <  1:2235721/140‑1 (MQ=255)
                               tCAGCAGCTTTAGCGATATTACAAAGAAAACATGAATCCGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCCGCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTtg                                                                                                             <  2:838864/140‑1 (MQ=255)
                               tCAGCAGATTTAACGATTTTACAAATAAAAATTGAATCTGGGGCTTATTCAAAAAGTAATGAAGCTCCCTTCAAAAAGACTCCTGGCGTGTCAGCTTTCAATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTtg                                                                                                             <  1:2100235/140‑1 (MQ=255)
                                    cgatttATCGCAATTCCAACCAAAACCTCCACCCGGGCCGTATACAAAACGCAAAGAAGCGCCCTCCCAACCCACGCCGGGCGAGTCAGCTTTCCATCAGCCCCACGACTGTAGAACGTGCCTATGAACAGCTTgctgct                                                                                                        <  1:2414064/137‑1 (MQ=255)
                                    agttttATCGCTTTTTCAAAAAAAACAGGCATCCGGGGGGTATAAAAAAAGGATTGAAGCTCCCTTCAAAAACACCCCTGGCTAGTCAGGTTTCCAACAGACACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct                                                                                                        <  1:2636760/137‑1 (MQ=255)
                                    agttttATCGATATTTCAAACAAAACCTGCAAGCGGGGCGTATTCAAAACGGACTTACGCACCCTTCCAAACGACTCCTGGCGAGTCAGGTTCCAATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct                                                                                                        <  1:2808699/137‑1 (MQ=255)
                                    agcTTTATCTCTATTTCAAAGAAAACATGCATCCGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCGTGGCGAGTCAGCTTTCCATCTGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct                                                                                                        <  2:1242975/140‑1 (MQ=255)
                                    agcTTTATCTCTATTAAAAATAAAACATCAATCAGGGGCGTATTAAAAAAGGAATGAAGCTCCCTACCAAACCCCTCCTGGCGAGTAAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct                                                                                                        <  2:299105/140‑1 (MQ=255)
                                    agcTTTATCGCTATTTCAAACAAAACAGGCATCCGGGGCGTATTAAAAAAGGAATGAAGCGCCCTGCCAAAAGCCGCCTGCCGAGTCAGCTTTCAATCACTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct                                                                                                        <  2:861172/140‑1 (MQ=255)
                                    agcTTTATCGCTATTTAAAAGAAAACATGCATCCGGGGCGTATCCAAAACGGAATGACGCTCCGTTCCAACCGCCGCGTGGCTATTCAGCTTTCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct                                                                                                        <  2:2072334/140‑1 (MQ=255)
                                    agcTTTATCGATATTTCAAACAAAACTTGCATCTGGGGCTAATAAAAAAAGCAATGACGCTCCCTTCCAAAACCCTCCTGGCGATTAAGCTTTCCATCATACACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct                                                                                                        <  1:2045372/140‑1 (MQ=255)
                                    agcTTTATCGATATTTCAAACAAAACCTGAATCCGGGGCTTATTCAAAATGGAATGCAGCGCCCTTCCAAACCACCCCGGGCGAGTCAGCGTGCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct                                                                                                        <  1:850108/140‑1 (MQ=255)
                                    agcTTTATCGATATTTCAAACAAAACATGAATCCGGGGCGTATTCAAAAAGTAATTAAGCGCCCTTCCAAACGACTCCTGGCGAGACAGCTTTCCAACCGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct                                                                                                        <  2:2898363/140‑1 (MQ=255)
                                    agcTTTATCGATATTACAAACAAAACCTGAAGCAGGGGCTTATTCAAAAAGGAATTAAGCTCCCTTCCAAAACACTCCGGGCGAGTCAGCTTTCCATCCGGCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct                                                                                                        <  2:433392/140‑1 (MQ=255)
                                    agcTTTACCGCTATTTCAAAGAAAACATCAATCAGGGGCGTATTCAAAAAGGAATTAAGCTCCCTTCCAAAAGACTCCGGGCGAGTCAGCTTTCCACCCGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct                                                                                                        <  2:1105229/140‑1 (MQ=255)
                                    agcTTTACCGCTATTCAAAACACAACATGCATCCGGGGCGTATTCAACAAGGAATGACGCGCCCTTCCAACAGACCCCGGGCGAGTAAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct                                                                                                        <  2:221378/140‑1 (MQ=255)
                                    agcTTTACCGCTATTACAAACAAAACCTGAACCCGGGGCTTATAAAAAAAGGAATCACGCGCCCTCCCAAACCACCCCGGGCGAGTCAGGTTCCCAACCGTCACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct                                                                                                        <  1:2314076/140‑1 (MQ=255)
                                    agcTTTACCGATATTACAACCAAAACATCCACCCGGGGCTTATAAAAAAAGCAATGAACCTCCCTCCCAAAACACTCCGGGCGAGTCAGCTTACCAACCGCCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct                                                                                                        <  1:1282284/140‑1 (MQ=255)
                                    agatttATCGCTATTTCAAACAAAACATGCATCAGGGGCTTATAAAAAAAGGAATGACGCTCCGTTCCAAAAGACTCCTGGCGAGTCAGCTTGCCATCAGACAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct                                                                                                        <  2:394153/137‑1 (MQ=255)
                                      ttttATCGCTATTTAAAACAAAACCTCCATCAGGGGCGTATTCAAAAAGCAATCAAGCGCCCTTCAAAAAGACTCCTGGCGAGTCAGTTTACCATCCGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa                                                                                                      <  2:1014495/139‑1 (MQ=255)
                                      ttttATCGATATTACAAACAAAACAGCCAGCCGGGGCTTATTAAAAAAGGAATGACGCTCCCTTCCAAAACACGCCTGGCGAGTCAGCTTACCATCAGACACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa                                                                                                      <  1:551906/139‑1 (MQ=255)
                                      cttgctCGATATTGCAACCAAAACATGCACCCGGGGCGTATTCAAAACGGAATCAACCGCCCTTCAAAAACACTCGGGGCGAGGCAGTTGCCCAACAGCCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa                                                                                                      <  2:304518/135‑1 (MQ=255)
                                      cTTTATCGATATTTAAAAGAAAACTGGCACCAGGGGCGTATTAAAAAAGCAATGAAGCGCCCTTCCAAACGACTCCGGGCTATTCAGCTTTCCAGCCGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa                                                                                                      <  2:1474004/140‑1 (MQ=255)
                                      cTTTACCTCTATTTAAAAGAAAACATGAATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACCCCTGGCGATTCAGCTTTCAATCAGTAACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa                                                                                                      <  2:904607/140‑1 (MQ=255)
                                      cTTAATCGCCATTTCAAAAAACACTTGCAACAGGGCATTTTACAACACGTAAAGAACCTCGCTTCCAAACCCCCCCTGGCCCGGCAGCTTTCCAGCAGTCACACGACGGTAGAACCTGCCTATGAACAGCTTGCTGCTGa                                                                                                      <  2:2397528/140‑1 (MQ=255)
                                         tATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAggg                                                                                                   >  2:2523723/1‑140 (MQ=255)
                                           tcgatttttCAAACAAAACATGCATCAGGGGCTTATAAAAAAAGTAATGACGCTCCCTACCAAAACACTCGTGGCGATTCAGATTTCCATCCGACACGCGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCt                                                                                                 <  1:1877916/134‑1 (MQ=255)
                                           tCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAAAAGCTTGCTGCTGAGGGCt                                                                                                 >  1:1014495/1‑140 (MQ=255)
                                           tCGATATTTCAAAAAAAACATGAAGCTGGGGCGTATTAAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCt                                                                                                 <  2:1620327/140‑1 (MQ=255)
                                           tCGATATTTAAAACAAAACATGCATCCGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCAACCGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCt                                                                                                 <  2:2951378/140‑1 (MQ=255)
                                                              aTGCTTCCGGGGCGTTTTCAAAAAGCAATGAAGCCCCGTTCCAAAAGACTCGTGGCGATTCAGCTTTCCATCAGTAACACGACTGTAGAACGTGCCTATGACCAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCaag                                                                              <  1:1359887/140‑1 (MQ=255)
                                                               tGCATCAGGGGCTTATTCAAAAAGGATGGAAGGGCCCTTCAAAACGACTCCTGGCTAGTCTGTTTTCCATCAGGCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCaaga                                                                             <  2:1641365/140‑1 (MQ=255)
                                                                    ccggggCGTATAAAAAAAGGAATGAAGCTCCCTTCCAAACCCCGCCTGGCGAGTCAGCTTTCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCgg                                                                        <  2:2168949/138‑1 (MQ=255)
                                                                        ggCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATgg                                                                    >  2:2786430/1‑140 (MQ=255)
                                                                            tataaaaaaaGTATTTAAGCTCCCTTCCAAACCACCCCGGGCTATTCAGCTTTCAATAAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg                                                                <  1:1183449/135‑1 (MQ=255)
                                                                            tagtCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg                                                                >  1:437795/4‑140 (MQ=255)
                                                                            tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg                                                                >  1:2580067/1‑140 (MQ=255)
                                                                            tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg                                                                >  2:2478906/1‑140 (MQ=255)
                                                                            tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg                                                                >  2:1003855/1‑140 (MQ=255)
                                                                            tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg                                                                >  2:697495/1‑140 (MQ=255)
                                                                            tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg                                                                >  2:701227/1‑140 (MQ=255)
                                                                            tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg                                                                >  2:843512/1‑140 (MQ=255)
                                                                            tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATAGTGAGCAAGCCAAGAAGCGGATGGTTTg                                                                >  2:2275454/1‑140 (MQ=255)
                                                                            tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATAAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTCCTGCTGAGGGCTATATCGTGACCAAGCCAAGAAGCGGATGGTTTg                                                                >  1:3047188/1‑140 (MQ=255)
                                                                               tCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCACGCCAAGAAGCGGATGGTTTGCTg                                                             >  2:1133773/1‑140 (MQ=255)
                                                                               tCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTg                                                             >  2:1061946/1‑140 (MQ=255)
                                                                                 aaaaaGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGAt                                                           >  1:2851379/1‑140 (MQ=255)
                                                                                      ggAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTCTATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCa                                                      >  1:2613796/1‑140 (MQ=255)
                                                                                                 cccTTCCAAAACACTCCTGGCGATACAGATTTCCATCAGACACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGAtt                                           <  1:2273251/140‑1 (MQ=255)
                                                                                                 cccTACCAAAACACCCCGGCCTAGTAAGCTTTCCATAAGACAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGAtt                                           <  1:2662542/140‑1 (MQ=255)
                                                                                                  ccTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGAttt                                          >  2:567598/1‑140 (MQ=255)
                                                                                                  ccTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGAttt                                          >  1:904732/1‑140 (MQ=255)
                                                                                                      caaaaaGCCTCGTGGCGAGGCAGGTGACCACCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCg                                      <  2:1156023/138‑1 (MQ=255)
                                                                                                        aaaaGACTCGTGGCGAGTCAGCTTTCCACCCTTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTa                                    <  1:1022448/140‑1 (MQ=255)
                                                                                                        aaaaGACTCCTGGGGAGTCAGCTTTCAATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTa                                    <  1:2223440/140‑1 (MQ=255)
                                                                                                            gACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGt                                >  2:494433/1‑140 (MQ=255)
                                                                                                              cTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGACGCGGATGGTTTGCTGATTATCATGATTCTGATGTTGCGTATCGTaa                              >  2:1368781/1‑140 (MQ=255)
                                                                                                              cTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTCTCATGATTCTGATTTTGCGTATCGTaa                              >  2:63302/1‑140 (MQ=255)
                                                                                                              cTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTaa                              >  2:1637979/1‑140 (MQ=255)
                                                                                                               tCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTaaa                             >  2:1884810/1‑140 (MQ=255)
                                                                                                               tCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTaaa                             >  1:1258033/1‑140 (MQ=255)
                                                                                                                  tGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCTTATCGTAAAATa                          >  1:936340/1‑140 (MQ=255)
                                                                                                                  tGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATa                          >  1:1756904/1‑140 (MQ=255)
                                                                                                                    gcctgTCCGCTTTCAACCCGTAAATCGACTGTAGAAAGTGCCTATGAACAGCTTGCTGCTGCTGGCTATATCGTTAGCAAGCCAAGAAGCTGATGGTTTGCTTATTATAATGATTCTGATTTTGCGTATCGTAAAATaac                        <  2:1357062/136‑3 (MQ=255)
                                                                                                                         tCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAgcg                   >  1:1432315/1‑140 (MQ=255)
                                                                                                                         tCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAgcg                   >  2:833952/1‑140 (MQ=255)
                                                                                                                           aGCATTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCAGGATTCTGATGTTGCGTAGCGTAAACTACCAAGCGCa                 >  2:157504/1‑140 (MQ=255)
                                                                                                                               ttCCTTCATTCAAACGACTGTTGAACGTGCCTATGTACAGCTTTATTCTGAGGGCTTTATCGTGATCATGCCAAGAAGAGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAgcgcttaac             <  2:1308305/140‑6 (MQ=255)
                                                                                                                               ttCCATCCGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAGCGCATCAc             <  2:2943866/140‑1 (MQ=255)
                                                                                                                               ttCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAGCGCATCAc             <  1:629300/140‑1 (MQ=255)
                                                                                                                               ttCCATCAGACACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAGCGCATCAc             <  1:2958611/140‑1 (MQ=255)
                                                                                                                                       gTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct                                                                                                        <  2:527231/41‑1 (MQ=255)
                                                                                                                                       gTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct                                                                                                        >  1:527231/1‑41 (MQ=255)
                                                                                                                                          aaaCGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAGCGCATCACCAAGTCAAGaa  >  2:110451/1‑140 (MQ=255)
                                                                                                                                           |                                                                                                                                          
TTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAGCGCATCACCAAGTCAAGAA  >  NZ_CP034943/549005‑549282

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑