| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,408,727 | 0 | C | A | 25.0% | 144.5 / 14.7 | 88 | A327S (GCG→TCG) | spoIIIAE | stage III sporulation protein AE |
| Reads supporting (aligned to +/- strand): ref base C (38/28); new base A (0/22); total (38/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.33e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CAAAAATATAAATGACGCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGCCAAGTACAGGAATAAAGTTTCCGGTTATAAATTTAG > NZ_CP034943/2408592‑2408861 | cAAAAATATAAATGACGCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATa < 1:2645561/140‑1 (MQ=255)cAAAAATATAAATGACGCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATa > 2:708671/1‑140 (MQ=255)cAAAAATATAAATGACGCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATa > 2:708636/1‑140 (MQ=255) aaaaTATAAATGACGCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACa < 2:6329/140‑1 (MQ=255) aaTGACGCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCaaaa > 2:1132987/1‑140 (MQ=255) ttaCGCTTTTGATTATGAGTTCGTGGCAGGTAATGCGGGGCCCGCCTCCAAGGTGCTGATGAATGGGGGGTGCCAGCTTATAAATAAAAGCGAGGGAAAGAACTTTGTTTGCGGGAAAAGCCGCAATACAGATCAAAATa < 2:345155/138‑1 (MQ=255) aCGCTTTTGCTTATGACGTCGAGGCAGTTAATCACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGATTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCTAAATACAGATCAAAATAGc < 2:1173611/140‑1 (MQ=255) cGCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCg > 2:2438941/1‑140 (MQ=255) gCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGa > 1:187596/1‑140 (MQ=255) gCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGa > 1:1726650/1‑140 (MQ=255) ttgaCGTCGAGGCTGTTAATGCCGGGCCCGCCTCCAAGCGGCTTAATAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATGGCCGGAAAAGCCGAAATACAGATAAAAATAGCGACTCCGAGAAt < 1:1951829/139‑1 (MQ=255) atgaCGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGTAGAATCGCGGGTGCCATCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAGGCCGCAATACAGATCAAAATAGCGACTCCGAGAAt > 1:1030559/1‑140 (MQ=255) atgaCGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCTCGAAt > 1:162847/1‑140 (MQ=255) atgaCGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAAt > 1:162282/1‑140 (MQ=255) atgaCGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAAt > 2:2649625/1‑140 (MQ=255) atgaCGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAAt > 2:2527572/1‑140 (MQ=255) gaCGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATcc < 2:1726650/140‑1 (MQ=255) aggTCGAGGCTGTTAATGACGGGCCCGCCGCCAAGCGGCTGAAGAAGGGCGGCTGCCTGATTATAAATAAACGCGAGGTAAATCACTTTGATTGCCGCAAAAGCCTAAATACAGATAAAACTAGCGACTCCGAGAATccc < 2:1722237/138‑1 (MQ=255) aCGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATccc < 2:301862/140‑1 (MQ=255) gTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAAGCGCGGCTGCCAGCTTATAAAAAAAAGCGAGGGAAAGCACTTTGATGGCCGGAAAAGCCGAAATACCGATCAAAATAGCGACTCCGAGAATCCCTa < 2:1956559/140‑1 (MQ=255) gTCGAGACTGGTAATGCCGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGGGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTa < 2:1384592/140‑1 (MQ=255) ggctgttAATGACGGGCCCGCCTCCAAGCGGCTGAATAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAACGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTa < 2:1826697/134‑1 (MQ=255) ggCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTa > 2:866087/1‑140 (MQ=255) ggCAGGTAATGACCGGCCCGCCACCACGCGGCTGAAGACTCGCGGCTGCCAGCTTAAAAACACCAGCGAGGGAAAGCACGTGGATGCCCGGAACAGCCGCAATAAAGATCAAAATCGCGACTCCGAGAATCCCTACTGTa < 2:1827446/140‑1 (MQ=255) ggTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTAtttt > 2:551379/1‑140 (MQ=255) ttAATGCCGGGCCCGCCTCAACGCGGATTAACAATCGGGGCTGCCAGATTATAAATAAACGCGTGGAAACGAATTTTGTTTGCCGCAAAAGCCGAAATACACAACAAAAACGCGACTCCGAGAATCCCTACTGTAttttt < 1:2426128/139‑1 (MQ=255) ttAATGCCGGCCCCGCCACAACGCGGCTTAAGACTCGCGGCTGCCAGATTATAAATAAACGCGAGGTAAAGCACTTTGTTTGCCGCAAAAGCCCAAAAACAGATAAAAAACGCGACTCCGAGAATCCCTACTGTAttttt < 1:1842733/139‑1 (MQ=255) gTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACATATCAAAATAGCGACTCCGAGAATCCCTACTGTAttttt < 2:2491969/140‑1 (MQ=255) gTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTAttttt > 2:1873789/1‑140 (MQ=255) gTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTAttttt > 1:2730766/1‑140 (MQ=255) gTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTAttttt > 1:1617069/1‑140 (MQ=255) tattGACGGGCCCGCCACCAAGCGGCTGAACAATCGCGGGTCCCAGCTAAAAAAAAAAAGCGCGGCAACCCACTTTGATTGCCGCAAACCCCGAAATACACACAAAAATCGCGACTCCGAGAATCCCTACTGTATTTTTc < 1:2046323/137‑1 (MQ=255) tAATGCCGGCCCCGCCCCCACGCGGCTGAACAATCGCGGCTGCCAGATTATAAATAAACGCGAGGGAACCCACTTTGATTGCCGCAAAAGCCGCAATACAGATAAAAATCGCGACTCCGAGAATCCCTACTGTATTTTTc < 1:696563/140‑1 (MQ=255) tAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACACATCAAACTAGCGACTCCGAGAATCCCTACTGTATTTTTc < 2:1278009/140‑1 (MQ=255) ctgccGGGCCCGCCCCCACGCGGCTGACCAAGCGCGGCTGCCAGCTTATAAATAAAAGCGCGGCAACGCACTTTGTTGGCGGCAAACCCCGAAAAACAGAACAAAATCGCGACTCCGAGAATCCCTACTGTATTTTTcag < 1:1024287/136‑1 (MQ=255) aggccGGGCCCGCCTCCACGCGGCGTAAGAATCGCGGCTGCCAGCTTATAAAGAAAAGCGAGGGAAACCAGTTTGATTGCCGGAAACGCCGCAATACAGATCAAAATAGCGACTCCGAGACTCCCTACTGTATTTTTcag < 2:1254460/136‑1 (MQ=255) aggACGGCCCCGCCACCCCGGGGCTGAAGAAGCGCGGCTGCAAGCTTATAAAAAAACGCTCGGCAAAGAACTTTGATTGCCGGAAAAGCCTCAATCCAGATCAAACTCGCGACTCCGAGAATCCCTACTGTATTTTTcag < 1:1024428/138‑1 (MQ=255) aTGCCGGGCCCGCCTCCACGCGGCTGAAGAATCGCGGCTGCCAGCTTATAACTAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAACGAGCGACTCCGAGAATCCCTACTGTATTTTTcag < 2:139492/140‑1 (MQ=255) aTGCCGGGCCCGCCTCCAAGCGGCTGAATAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGTAATGAACTTTTATTGCCGTAAAAGCCGAATTACAGATCAAAATCGCGACTCCGAGAATCCCTACTTTATTTTTcag < 1:2001546/140‑1 (MQ=255) aTGACGGGCCCGCCTCCAAGCGGCGGAAGAATCGGGGCTGCCAGCTTTTAAATAAAAGCGAGGTAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTcag < 2:692608/140‑1 (MQ=255) gCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAg > 1:712963/1‑140 (MQ=255) gCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAg > 1:32412/1‑140 (MQ=255) gCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAg > 2:2742958/1‑140 (MQ=255) gCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAg > 1:138189/1‑140 (MQ=255) gCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTAATAAATAAAAGCTAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCACTACAGAGCAAAATAGCGACTCCGAGAATCCCTCCTGTATTTTTCAGCAGTAAg > 1:2073202/1‑140 (MQ=255) cccGCCTCCACGCGGCTTAAGACTCGGGGCTGCAAGATTAAAAATAAACCCGAGGCAAAGCACTTTGTTGGCCGTAAACGCCCAAATACACATAAAAATCGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAgg < 1:434093/140‑1 (MQ=255) ccTCCAAGCGGCTGTAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAgc > 1:2534736/1‑140 (MQ=255) ctccccgCGGCTGAAGAAGCGCGGCTGCCAGCTTATAAATAACAGCGAGGGAAAGCACTTTGATTGCCGCAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAgcg < 2:720542/134‑1 (MQ=255) cTCCACGCGGGTTAAGAATCGCGGCGGCCAGCTTATAAAAAAACGCGAGGCAAAGCACTTTGATGGCCGGAAAAGCCGAAATACACAACAAAATCGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAgcg < 1:1873789/140‑1 (MQ=255) cTCAAAGCGGCTTAAGAATCGCGGCTGCCTGCTTATAAATAAAAGCGAGGCAAACCACTTTGATGGCCGTAAAAGCCGAAATACAGATAAAAATCGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAgcg < 1:2490888/140‑1 (MQ=255) ccACGCGGCTGAAGAATCGCGGCTGCAAGTTTATAAATAAAAGCGAGGGAACGCACTTTGTTTGCCGTAAACGCCGCAATACAGAACAAAATCGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCt < 1:708636/140‑1 (MQ=255) ccACGCGGCTGAAGAATCGCGGCTCCCAGTTTATAAATAAAAGCGTGGCAACCCAGTTTTATTGCCGGAAAAGCCCAAATACATATAAAAAAAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCt < 1:708671/140‑1 (MQ=255) cgCGGCTGAAGACTCGCGGCTGCCAGCTTATAAATAAAACCGAGGGAAAGCACTTTGCTTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGAt < 2:1342318/139‑1 (MQ=255) aGCGGCTTAAGAATCGCGGCTGCCAGTTTAAAAATAAAAGCGAGGCAAACCACTTTTATTGCCGGAAAAGCCGAAAAACAGAAAAAAATCGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGAt < 1:1132987/140‑1 (MQ=255) aGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGAt < 2:1987713/140‑1 (MQ=255) gCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGAAGTAAGGAAGCGCTGATcaca > 2:2305779/1‑140 (MQ=255) cTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAg > 2:1282480/1‑140 (MQ=255) tCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGAACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGta > 2:1677946/1‑139 (MQ=255) cgcgGCTGCCAGCTTATAAATAAACGCGAGGTAAAGCACTTTGATTGCCGCAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTcg < 1:120125/140‑1 (MQ=255) cgcgGCTGCAAGATTATAAATAAAAGCGAGGGAAACCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTcg < 2:1305447/140‑1 (MQ=255) gcgGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTcgc > 2:417756/1‑140 (MQ=255) gcgGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTcgc > 2:1403734/1‑140 (MQ=255) gcgGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTcgc > 2:1314818/1‑140 (MQ=255) tataAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATCGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACAtt < 2:1338324/140‑1 (MQ=255) taaataaaAGCGAGGTAAAGCACTTTGTTTGCCGGAAAAGCCGAAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCg < 2:1826928/140‑1 (MQ=255) aaataacCGCTAGGGAAAGCATTTTTTTTGCCGTAAAAGCCTCAATACAGATAAAATTAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCgg < 1:2516820/140‑1 (MQ=255) atacacgCGAGGGAAAGCACTTTGATTGCCGCAAAAGCCGAAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGcc < 2:2451030/134‑1 (MQ=255) ataacAGCGAGGCAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAACTAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGcc < 2:2129359/140‑1 (MQ=255) ataaaTGCTAGGCAAATCAGTTTGATTGCCGCAAAAGCCGAAATACACATCAAAATCGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGcc < 2:251075/140‑1 (MQ=255) ataaaCGCGAGGCAAAGCACTTTGTTTGCCGGAAAAGCCGAAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGcc < 1:2438941/140‑1 (MQ=255) ataaaAGCGTGGTAAAGCACTTTTATTGCGGGAAAAGCCGAAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGcc < 1:741809/140‑1 (MQ=255) ataaaAGCGTGGGAAAGCACTTTGATTGCCGGAAAAGCCGAAATAAAGATAAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGcc < 2:521193/140‑1 (MQ=255) ataaaAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGcc < 2:2207291/140‑1 (MQ=255) ataaaAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGAAATAAAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGcc < 2:1197210/140‑1 (MQ=255) aaGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCt < 2:1459212/100‑1 (MQ=255) aaGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCt > 1:1459212/1‑100 (MQ=255) aaGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCTCGTCTGTAAACATTCGGCCAAGt > 2:1381587/1‑140 (MQ=255) aaGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGCCAAGt > 2:1757308/1‑140 (MQ=255) aaGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGCCAAGt > 2:1728368/1‑140 (MQ=255) aGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGCCAAGTACAgg > 1:241697/1‑140 (MQ=255) taaaGCACTTTGTTTGCCGGAAAAGCCGAAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTTTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGCCAAGTACAGGAAt < 2:1768612/139‑1 (MQ=255) tttGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGCCAAGTACAGGAATAAAGTTTc > 1:1530300/1‑140 (MQ=255) tttGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGCCAAGTACAGGAATAAAGTTTc > 1:1355508/1‑140 (MQ=255) tGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGCCAAGTACAGGAATa > 1:556707/1‑131 (MQ=255) tGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGCCAAGTACAGGAATa < 2:556707/131‑1 (MQ=255) gCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGCCAAGTACAGGAATAAAGTTTCCGGTtat > 1:2593327/1‑140 (MQ=255) gCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTAATGTAATTTTCAGCAGTAAGTAATCGCTGATCACAGTCTCTGTCGCGTATGTAAACATTCGTCCAAGTACAGGAATAAAGTTTCCTGGtat > 2:294625/1‑140 (MQ=255) cgCCGCATTACACTTCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGCCAAGTACAGGAATAAAGTTTCCGGTTATAAATTTAg < 2:1223119/139‑1 (MQ=255) | CAAAAATATAAATGACGCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGCCAAGTACAGGAATAAAGTTTCCGGTTATAAATTTAG > NZ_CP034943/2408592‑2408861 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |