| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP034943 | = 607210 | 594 (1.310) | 15 (0.030) | 5/246 | NT | 3.4% | coding (53/1125 nt) | EO946_RS03185 | collagen‑like protein |
| ? | NZ_CP034943 | 607526 = | 279 (0.630) | coding (369/1125 nt) | EO946_RS03185 | collagen‑like protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP034943/607071‑607210‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAA > NZ_CP034943/607526‑607664 CGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCGGGACCAGCAGG > 1:1052570/1‑140CGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGG > 1:4080363/1‑140CGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGG > 1:5303431/1‑140 ATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACCAGGACCACCCGGACCACACGGACTGCCGGGAGGCATGGGAGCCACAGGAGCTACCGGGGCCGCCGGACCATCCGGAGagcc > 1:713791/1‑136 ATCCAAGGCAGTGTTGGATCCACAGTAACACAAGGACAACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAC > 2:3621525/1‑140 ATCCAAGGCAGTGTTGGAGCCACAGGAAAACAAGCACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAACCGGCGCGAC > 2:1281212/1‑140 AGCCACAGGACCACACGGACCACCAGGACCACCAGGAGCACCAGGACCACCAGGACCACACGGACTGCCGGGAGGACTGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAG < 2:2312446/140‑1 ACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGG < 2:701001/90‑1 ACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGG > 1:701001/1‑90 AGCCACAGGCGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGCGGGACCAGCCGGAGCGACGGGAGCCACAGGCGCTACTGGGGAAGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAG < 1:3309802/140‑1 CACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGG < 1:4929292/42‑1 CACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGG > 2:4929292/1‑42 AGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGA > 1:6237476/1‑40 AGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGA < 2:6237476/40‑1 GGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGG < 1:7521382/56‑1 GGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGG > 2:7521382/1‑56 CGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGC < 1:936047/36‑1 CGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGC > 2:936047/1‑36 ACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGA < 2:302449/37‑1 GAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCCACGGGagcc < 1:1990340/140‑5 CGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP034943/607071‑607210‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAA > NZ_CP034943/607526‑607664 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |