BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	908850 =	347 (0.770)	3 (0.010)	3/242	NT	0.88%	coding (151/258 nt)	sspE	gamma type acid‑soluble spore protein SspE
*	?	NZ_CP034943	= 908846	340 (0.780)	3 (0.010)	3/242	NT	0.88%	coding (147/258 nt)	sspE	gamma type acid‑soluble spore protein SspE
Rejected: Frequency below/above cutoff threshold.

Only 100 of 379 total aligned reads displayed.

AACAATTTCAGCAAAACAAACGCACAACAAGTTAGAAAACAAAACCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCAATCTGCTGAACAAAACAAACAACAAAACAGCTAATCACTGAAACAGAAAAAAGCACTTCATCTT  >  NZ_CP034943/908712‑908987

tcaaacaatttcagcaaaacaaacgcacaacaagttagaaaacaaaaccaacaatcagctgctggtcaaggtcaattcggcactgaatttgctagcgaaacaaacgctcagcaagtcagaaaacaaaaccagcaatcaGc                                                                                                                                          <  2:648535‑M1/2‑1 (MQ=255)

 aCAATTTCAGCAAAACAAACGCACAACAAGTTAGAAAACAAAACCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAgctgct                                                                                                                                         >  2:5231646/1‑140 (MQ=255)

 aCAATTTCAGCAAAACAAACGCACAACAAGTTAGAAAACAAAACCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAgctgct                                                                                                                                         >  2:1329465/1‑140 (MQ=255)

 aCAATTTCAGCAAAACAAACGCACAACAAGTTAGAAAACAAAACCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACAAGCAATCAgctgct                                                                                                                                         >  2:4891081/1‑140 (MQ=255)

  aaacaatttcagcaaaacaaacgcacaacaagttagaaaacaaaaccaacaatcagctgctggtcaaggtcaattcggcactgaatttgctagcgaaacaaacgctcagcaagtcagaaaacaaaaccagcaatcaGCTg                                                                                                                                        >  2:7349174‑M1/137‑140 (MQ=255)

  aaacaatttcagcaaaacaaacgcacaacaagttagaaaacaaaaccaacaatcagctgctggtcaaggtcaattcggcactgaatttgctagcgaaacaaacgctcagcaagtcagaaaacaaaaccagcaatcaGCTg                                                                                                                                        >  2:4311136‑M1/137‑140 (MQ=255)

   aaTTTCAGCAAAACAAACGCACAACAAGTTAGAAAACAAAACCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTgg                                                                                                                                       <  1:2066411/140‑1 (MQ=255)

   aaTTTCAGCAAAACAAACGCACAACAAGTTAGAAAACAAAACCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTgg                                                                                                                                       <  2:360407/140‑1 (MQ=255)

       tCAGCAAAACAAACGCACAACAAGTTAGAAAACAAAACCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCcaa                                                                                                                                   <  2:3108446/140‑1 (MQ=255)

             aaacaaacGCACAACAAGTTAGAAAACAAAACCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGt                                                                                                                             <  1:3614038/140‑1 (MQ=255)

             aaacaaacGCACAACAAGTTAGAAAACAAAACCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGt                                                                                                                             <  1:1388613/140‑1 (MQ=255)

                  aacGCACAACAAGTTAGAAAACAAAACCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACACGGTCAAtt                                                                                                                        <  2:2628832/140‑1 (MQ=255)

                     gCACAACAAGTTAGAAAACAAAACCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCgg                                                                                                                     <  2:2040351/140‑1 (MQ=255)

                       acaacaAGTTAGAAAACAAAACCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCa                                                                                                                   <  1:6292328/140‑1 (MQ=255)

                       acaacaAGTTAGAAAACAAAACCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCa                                                                                                                   <  2:6848587/140‑1 (MQ=255)

                       acaacaAGTTAGAAAACAAAACCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCa                                                                                                                   <  1:78973/140‑1 (MQ=255)

                       acaacaAGTTAGAAAACAAAACCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCa                                                                                                                   <  1:2154186/140‑1 (MQ=255)

                       acaacaAGTTAGAAAACAAAACCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCa                                                                                                                   <  2:1714428/140‑1 (MQ=255)

                       acaacaAGTTAGAAAACAAAACCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCa                                                                                                                   <  1:3816263/140‑1 (MQ=255)

                       acaacaAGTTAGAAAAAAAAACCCACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAACCGCTCAGCAAGTCAGAAAACAAACCCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCa                                                                                                                   <  2:420070/140‑1 (MQ=255)

                         aacaaGTTAGAAAACAAAACCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACt                                                                                                                 <  1:7212745/140‑1 (MQ=255)

                          acaaGTTAGAAAACAAAACCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTg                                                                                                                >  1:1151211/1‑140 (MQ=255)

                           caaGTTAGAAAACAAAACCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGa                                                                                                               >  2:2934131/1‑140 (MQ=255)

                               ttAGAAAACAAAACCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTc                                                                                                           >  1:3309906/1‑140 (MQ=255)

                                 aGAAAACAAAACCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCa                                                                                                                   >  2:2996105/1‑130 (MQ=255)

                                 aGAAAACAAAACCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCa                                                                                                                   <  1:2996105/130‑1 (MQ=255)

                                   aaaacaaaacCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTa                                                                                                       >  2:2706256/1‑140 (MQ=255)

                                   aaaacaaaacCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTa                                                                                                       <  1:2471720/140‑1 (MQ=255)

                                     aacaaaccCACCACTCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGt                                                                                                     <  2:6345897/140‑1 (MQ=255)

                                     aacaaaacCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGt                                                                                                     >  1:2363758/1‑140 (MQ=255)

                                       caaaacCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACCAGGTCAATTCGGCACTGAATTCGCTAGTGa                                                                                                   <  1:5382280/140‑1 (MQ=255)

                                       caaaacCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGa                                                                                                   <  1:7355089/140‑1 (MQ=255)

                                         aaacCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGaaa                                                                                                 >  1:3131485/1‑140 (MQ=255)

                                         aaacCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGaaa                                                                                                 >  1:3737728/1‑140 (MQ=255)

                                         aaacCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGaaa                                                                                                 <  2:1367959/140‑1 (MQ=255)

                                          aaccaaccCTCACCTGCTGGTCCAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACACAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAAc                                                                                                <  2:1648891/140‑1 (MQ=37)

                                          aacCACCAATCAGCTGCTGGTCAAGGTCAATTCCGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAACACCAGCAATCAGCTGCTGGACAACAACGTCTATTCGGAACTGAATTCGCTAGTGAAAc                                                                                                <  2:1019356/140‑1 (MQ=255)

                                          aacCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAAc                                                                                                >  1:4761/1‑140 (MQ=255)

                                          aacCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAAc                                                                                                <  2:7125652/140‑1 (MQ=255)

                                               acaaTCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACg                                                                                           <  2:4541460/140‑1 (MQ=255)

                                               acaaTCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACg                                                                                           <  1:2201999/140‑1 (MQ=255)

                                                caaTCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACAAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGt                                                                                          >  2:4092695/1‑140 (MQ=255)

                                                 aaTCCGCTGCTGCTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTa                                                                                         <  1:6416701/140‑1 (MQ=255)

                                                 aaTCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTa                                                                                         <  2:250075/140‑1 (MQ=255)

                                                 aaTCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTa                                                                                         <  1:2928064/140‑1 (MQ=255)

                                                   tCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACACAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTAca                                                                                       <  2:6286332/140‑1 (MQ=255)

                                                   tCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAACACCAGCAAGCAGCTGCGGGCCAACAAGGTCAAGTCGGCACTGAATTCGCTAGTGAAACTGACGTAcc                                                                                       <  2:1523530/140‑2 (MQ=255)

                                                   tCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAACCCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTAca                                                                                       <  2:604486/140‑1 (MQ=255)

                                                   tCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTAca                                                                                       <  1:1911360/140‑1 (MQ=255)

                                                   tCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTAca                                                                                       <  2:2267201/140‑1 (MQ=255)

                                                        tgctgGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAgg                                                                                  >  1:5901200/1‑140 (MQ=255)

                                                           tgGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTaa                                                                               <  1:2748460/140‑1 (MQ=255)

                                                             gtcaaggtcaaTTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGa                                                                             >  2:579415/1‑140 (MQ=255)

                                                             gtcaaggtcaaTTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGa                                                                             >  1:1481644/1‑140 (MQ=255)

                                                                 aggtcaaTTCGTCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGt                                                                                                     >  1:1081322/1‑112 (MQ=255)

                                                                  ggtcaaTTCGGCACTGCATTTGCTAGCGAAACTAACGCTCAGCAAGTCAGAAAACAACACCAGCACTCAGCTGCTGGCCCACAAGGTCAATTCGGCACTGAATTAGCTAGTGAAACTGACGTACAGCAGGTCCGACCGCa                                                                        >  2:4621541/1‑140 (MQ=37)

                                                                  ggtcaaTTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCa                                                                        >  2:7320797/1‑140 (MQ=255)

                                                                   gtcaaTTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCaa                                                                       <  1:7161229/140‑1 (MQ=255)

                                                                   gtcaaTTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCaa                                                                       <  1:3994469/140‑1 (MQ=255)

                                                                       aTTCGGCACTGAATTTGCTAGCGAAACAATCGCTCAGCAAGTCAGACAACAACACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGGGAAACTGACGTACAGCAGGTAAGACAGCAAAAcc                                                                   >  2:3852787/1‑140 (MQ=255)

                                                                       aTTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAAcc                                                                   >  2:7718670/1‑140 (MQ=255)

                                                                       aTTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAAcc                                                                   >  2:3344223/1‑140 (MQ=255)

                                                                       aTTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAAcc                                                                   >  1:4219164/1‑140 (MQ=255)

                                                                       aTTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAAcc                                                                   >  1:4453800/1‑140 (MQ=255)

                                                                       aTTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAAcc                                                                   >  1:6778093/1‑140 (MQ=255)

                                                                       aTTCGGCACTGAATTAGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCAGTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAAcc                                                                   >  1:349000/1‑140 (MQ=255)

                                                                        ttCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCa                                                                  <  2:2363758/140‑1 (MQ=255)

                                                                        ttCGGCACTGAATTTGCCAGCGAAACACACGCTCAGCAAGTCAGAAAACAACACCAGCAATCAGCTGATGGCCAACAACGTCAATACGTCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCa                                                                  <  2:1601727/140‑1 (MQ=255)

                                                                             cACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAACCTGACGTACAGCAGGTAAGACAGCAAAACCAATctg                                                             >  1:5527436/1‑140 (MQ=255)

                                                                             cACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCAATctg                                                             <  1:4889333/140‑1 (MQ=255)

                                                                             cACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCAATctg                                                             >  1:2533105/1‑140 (MQ=255)

                                                                             cACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCAATctg                                                             >  1:7524675/1‑140 (MQ=255)

                                                                             cACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCAATctg                                                             >  2:4423015/1‑140 (MQ=255)

                                                                             cACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCAATctg                                                             <  2:4453800/140‑1 (MQ=255)

                                                                             cACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCACCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCAACTGAAACTGACGTACAGAACGTAAGACAGCAAAACCAATctg                                                             >  2:3930831/1‑140 (MQ=38)

                                                                                tGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCAATctgctg                                                          >  2:559645/1‑140 (MQ=255)

                                                                                tGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCAATctgctg                                                          >  2:4372126/1‑140 (MQ=255)

                                                                                  aaTTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCCACACGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCAATCTGCTGaa                                                        >  2:3704571/1‑140 (MQ=255)

                                                                                       gCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCAATCTGCTGaacaaaa                                                   >  1:5799673/1‑140 (MQ=255)

                                                                                         tAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCAATCTGCTGaacaaaaca                                                 <  1:1208687/140‑1 (MQ=255)

                                                                                          aGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCAATCTGCTGaacaaaacaa                                                >  2:5954867/1‑140 (MQ=255)

                                                                                            cGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCAATCTGCTGAACAaaacaaac                                              >  1:1678206/1‑140 (MQ=255)

                                                                                            cGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCAATCTGCTGAACAaaacaaac                                              <  2:6678174/140‑1 (MQ=255)

                                                                                            cGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCAATCTGCTGAACAaaacaaac                                              >  2:7417856/1‑140 (MQ=255)

                                                                                                 caaacGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCAATCTGCTGAACAAAACAAAcaacaa                                         <  1:87088/140‑1 (MQ=255)

                                                                                                 caaacGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCAATCTGCTGAACAAAACAAAcaacaa                                         <  1:6991927/140‑1 (MQ=255)

                                                                                                   aacGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCAATCTGCTGAACAAAACAAACAACaaaa                                       <  1:3441022/140‑1 (MQ=255)

                                                                                                      gCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCAATCTGCTGAACAAAACAAACAACaaactgt                                    <  1:2819817/140‑5 (MQ=255)

                                                                                                      gCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCAATCTGCTGAACAAAACAAACAACAAAACAg                                    <  2:1132598/140‑1 (MQ=255)

                                                                                                         cAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCAATCTGCTGAACAAAACAAACAACAAAACAGCTa                                 <  1:5015575/140‑1 (MQ=255)

                                                                                                         cAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCAATCTGCTGAACAAAACAAACAACAAAACAGCTa                                 >  1:3180622/1‑140 (MQ=255)

                                                                                                         cAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCAATCTGCTGAACAAAACAAACAACAAAACAGCTa                                 >  2:3469538/1‑140 (MQ=255)

                                                                                                           gCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCAATCTGCTGAACAAAACAAACAACAAAACAGCTAAt                               <  1:1329465/140‑1 (MQ=255)

                                                                                                           gCAAGTCAGAAAAAAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCAATCTGCTGAACAAAACAAACAACAAAACAGCTAAt                               <  2:5003203/140‑1 (MQ=255)

                                                                                                                   gAAAAAAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCAATCTGCTGAACAAAACAAACAACAAAACAGCTAATCACTGaaa                       <  1:5307098/140‑1 (MQ=255)

                                                                                                                         aaaacCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCAATCTGCTGAACAAAACAAACAACAAAACAGCTAATCACTGAAACAGaaa                 >  1:6211376/1‑140 (MQ=255)

                                                                                                                           aacCAGCAATCAGCTGCTGGCCAACAATGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCAATCTGCTGAACAAAACAAACAACAAAACAGCTAATCACTGAAACAGaaaaa               <  2:4127811/140‑1 (MQ=255)

                                                                                                                             ccAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCAATCTGCTGAACAAAACAAACAACAAAACAGCTAATCACTGAAACAGAAAAAAg             <  1:4629840/140‑1 (MQ=255)

                                                                                                                                 cAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCAATCTGCTGAACAAAACAAACAACAAAACAGCTAATCACTGAAACAGAAAAAAGCACt         >  2:5390029/1‑140 (MQ=255)

                                                                                                                                 cAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCAATCTGCTGAACAAAACAAACAACAAAACAGCTAATCACTGAAACAGAAAAAAGCACt         >  2:2141136/1‑140 (MQ=255)

AACAATTTCAGCAAAACAAACGCACAACAAGTTAGAAAACAAAACCAACAATCAGCTGCTGGTCAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGTACAGCAGGTAAGACAGCAAAACCAATCTGCTGAACAAAACAAACAACAAAACAGCTAATCACTGAAACAGAAAAAAGCACTTCATCTT  >  NZ_CP034943/908712‑908987

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.