BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
MC JC	NZ_CP034943	3,191,671	(ATTATAATT)_2→1	100%	intergenic (+3/‑66)	EO946_RS16520 → / → mrgA	oxidoreductase/metalloregulation DNA‑binding stress protein MgrA

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP034943	3191671	3191679	9	254 [0]	[0] 252	EO946_RS16520/mrgA	oxidoreductase/metalloregulation DNA‑binding stress protein MgrA

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	= 3191670	0 (0.000)	215 (0.510)	63/232	NT	100%	intergenic (+2/‑75)	EO946_RS16520/mrgA	oxidoreductase/metalloregulation DNA‑binding stress protein MgrA
*	?	NZ_CP034943	3191680 =	0 (0.000)	215 (0.510)	63/232	NT	100%	intergenic (+12/‑65)	EO946_RS16520/mrgA	oxidoreductase/metalloregulation DNA‑binding stress protein MgrA

Only 100 of 254 total aligned reads displayed.

ACAAAACAGCACGTAAAGAAATTGCGATACCCGATCGGAAAAGGCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTATTATAATTTAGTATTGATTTTTAATTAATACGTGGTATAATTAAATTAACAGATCACAAGGAGGACGTAACTTATGAAAACTGAAAATGCAAAAACAAATCAAACATTAGTTGAGAATTCAATGAACACACAATTAT  >  NZ_CP034943/3191531‑3191808

acaaAACAGCACGTAAAGAAATTGCGATACCCGATCGGAAAAGGCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATT                                                                                                                                            <  2:4435162‑M1/140‑1 (MQ=255)

acaaAACAGCACGTAAAGAAAGTGCGATACCCGATCGGAAAAGTCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATT                                                                                                                                            <  2:1332444‑M1/140‑1 (MQ=255)

acaaAACAGCACCTAACGAAATTGCGTTACCCGATCGGAAACTGCATCAATCTTACCTTGTTATTCAGATCGCTTGTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATT                                                                                                                                            <  1:5569474‑M1/140‑1 (MQ=255)

       aGCACGTAAAGAAATTGCGATACCCGATCGGAAAAGGCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtatt                                                                                                                                     >  2:3633500‑M1/1‑133 (MQ=255)

       aGCACGTAAAGAAATTGCGATACCCGATCGGAAAAGGCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtatt                                                                                                                                     >  2:3980029‑M1/1‑133 (MQ=255)

       aGCACGTAAAGAAATTGCGATACCCGATCGGAAAAGGCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtatt                                                                                                                                     >  2:5689516‑M1/1‑133 (MQ=255)

         cACGTAAAGAAATTGCGATACCCGATCGGAAAAGGCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgt                                                                                                                                   >  1:3443955‑M1/1‑131 (MQ=255)

         cACGTAAAGAAATTGCGATACCCGATCGGAAAAGGCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattga                                                                                                                                   >  1:5330204‑M1/1‑131 (MQ=255)

         cACGTAAAGAAATTGCGATACCCGATCGGAAAAGGCATCAAGCTTACCTTGTTATTCCGAGCGCTTTTTACTTGGTCTGCGTGGGAATCTATCCTGTAGAAACAACTATTCAGTTCATCTAAAGTATAATGtagtataga                                                                                                                                   >  1:5484069‑M1/1‑131 (MQ=255)

            gTAAAGAAATTGCGATACCCGATCGGAAAAGGCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgattt                                                                                                                                <  1:1991585‑M1/140‑13 (MQ=255)

             tAAAGAAATTGCGATACCCGATCGGAAAAGGCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttt                                                                                                                               <  2:3282131‑M1/140‑14 (MQ=255)

              aaaGAAATTGCGATACCCGATCGGAACAGGCATCAAGCTTACCTTGTTATTCCGATCGCTTGTTCCTTGGTCTGCGTGGGACTCTATCCTGAAGAAAAAACTATTCAGTTCATCTCAATTATAATTtagtattgattttt                                                                                                                              >  1:2664016‑M1/1‑126 (MQ=255)

              aaaGAAATTGCGATACCCGATCGGAAAAGGCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTttgtattgattttt                                                                                                                              >  1:1384956‑M1/1‑126 (MQ=255)

              aaaGAAATTGCGATACCCGATCGGAAAAGGCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgattttt                                                                                                                              <  2:2495423‑M1/140‑15 (MQ=255)

              aaaGAAATTGCGATACCCGATCGGAAAAGGCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgattttt                                                                                                                              >  1:311247‑M1/1‑126 (MQ=255)

                aGAAATTGCGATACCCGATCTGAAAAGGCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTTGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaa                                                                                                                            <  2:1849797‑M1/140‑17 (MQ=255)

                 gAAATTGCGATACCCGATCGGAAAAGGCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtatttatttttaat                                                                                                                           >  2:4497048‑M1/1‑123 (MQ=255)

                 gAAATTGCGATACCCGATCGGAAAAGGCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaat                                                                                                                           <  2:752377‑M1/140‑18 (MQ=255)

                      tGCGATACCCGATCGGAAAAGGCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaata                                                                                                                      >  1:6037532‑M1/1‑118 (MQ=255)

                      tGCGATACCCGATCGGAAAAGGCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaata                                                                                                                      <  2:492009‑M1/140‑23 (MQ=255)

                       tcgATACCCGAGCGGAACAGGCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatac                                                                                                                     <  2:4319973‑M1/139‑24 (MQ=255)

                       gCGATACCCGATCGGAAAAGGCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatac                                                                                                                     <  2:7326671‑M1/140‑24 (MQ=255)

                       gCGATACCCGATCGGAAAAGGCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatac                                                                                                                     <  2:3584379‑M1/140‑24 (MQ=255)

                        cGATACCCGATCGGAAAAGGCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacg                                                                                                                    >  1:6928833‑M1/1‑116 (MQ=255)

                        cGATACCCGATCGGAAAAGGCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacg                                                                                                                    <  1:5676173‑M1/140‑25 (MQ=255)

                            ccccgATCCGAAAAGTCAACAAGCTTACCTTGTTATTCCGCTCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggt                                                                                                                <  1:6082376‑M1/139‑29 (MQ=255)

                            aCCCGATCGGAAAAGGCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggt                                                                                                                <  1:2839940‑M1/140‑29 (MQ=255)

                               cGATCGGAAAAGGCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtata                                                                                                             <  1:1289357‑M1/140‑32 (MQ=255)

                               cGATCGGAAAAGGCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtata                                                                                                             <  2:2855617‑M1/140‑32 (MQ=255)

                               cGATCGGAAAAGGCATCAAGCTTACCTTGTTAGTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtata                                                                                                             <  1:1068445‑M1/140‑32 (MQ=255)

                                 aTCGGAAAAGGCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataat                                                                                                           <  2:2769326‑M1/140‑34 (MQ=255)

                                 aTCGGAAAAGGCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataat                                                                                                           <  2:5330204‑M1/140‑34 (MQ=255)

                                  tCGGAAAAGGCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttt                                                                                                                               <  1:4777748‑M1/119‑14 (MQ=255)

                                  tCGGAAAAGGCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttt                                                                                                                               >  2:4777748‑M1/1‑106 (MQ=255)

                                         aGGCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaa                                                                                                   <  1:2902366‑M1/140‑42 (MQ=255)

                                         aGGCATCAAGCTGACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAACAAAAAACTAGTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaa                                                                                                   <  1:3604668‑M1/140‑42 (MQ=255)

                                          ggCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaac                                                                                                  <  2:4083959‑M1/140‑43 (MQ=255)

                                          ggCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaac                                                                                                  <  1:3197971‑M1/140‑43 (MQ=255)

                                              tCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagat                                                                                              >  1:2990601‑M1/1‑94 (MQ=255)

                                              tCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagat                                                                                              <  2:2134813‑M1/140‑47 (MQ=255)

                                                aaGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatca                                                                                            >  2:3438318‑M1/1‑92 (MQ=255)

                                                    ttACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaag                                                                                        <  2:4255676‑M1/140‑53 (MQ=255)

                                                    ttACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaag                                                                                        <  1:3691857‑M1/140‑53 (MQ=255)

                                                     tACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaagg                                                                                       >  2:6288187‑M1/1‑87 (MQ=255)

                                                            ttATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgt                                                                                >  2:3036851‑M1/1‑80 (MQ=255)

                                                            ttATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgt                                                                                >  2:1127949‑M1/1‑80 (MQ=255)

                                                            ttATTCCGATCGCTTTTTCCCTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgt                                                                                <  2:6227903‑M1/140‑61 (MQ=255)

                                                              aTTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaa                                                                              <  1:746128‑M1/140‑63 (MQ=255)

                                                                 ccGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaactt                                                                           >  1:264‑M1/1‑75 (MQ=255)

                                                                    aTCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggtggacttaacttatg                                                                        >  2:4873642‑M1/1‑72 (MQ=255)

                                                                    aTCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacttaactgatg                                                                        >  2:6834839‑M1/1‑72 (MQ=255)

                                                                    aTCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatg                                                                        >  2:1486684‑M1/1‑72 (MQ=255)

                                                                    aTCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatg                                                                        >  1:5412945‑M1/1‑72 (MQ=255)

                                                                    aTCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatg                                                                        >  1:3918815‑M1/1‑72 (MQ=255)

                                                                    aTCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatg                                                                        >  1:6667755‑M1/1‑72 (MQ=255)

                                                                    aTCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatg                                                                        >  2:7684753‑M1/1‑72 (MQ=255)

                                                                             tCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaa                                                               <  1:2314995‑M1/140‑78 (MQ=255)

                                                                                  ggTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgc                                                          >  1:349730‑M1/1‑58 (MQ=255)

                                                                                  ggTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgaggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgc                                                          >  1:7319925‑M1/1‑58 (MQ=255)

                                                                                   gTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgca                                                         >  1:6980671‑M1/1‑57 (MQ=255)

                                                                                   gTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgca                                                         >  1:4763185‑M1/1‑57 (MQ=255)

                                                                                        cGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaac                                                    >  2:2066635‑M1/1‑52 (MQ=255)

                                                                                              aaTCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaaatca                                              <  1:1370897‑M1/140‑95 (MQ=255)

                                                                                                tCTATTCTTAAGAAAAAACTATTCATTTCATATAAATTATAATTtagtattgatttttaattaatacttggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaaatcaaa                                            <  1:6803260‑M1/140‑97 (MQ=255)

                                                                                                  tATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaattcaaaaacaaatcaaaca                                          >  2:6070830‑M1/1‑42 (MQ=255)

                                                                                                   aTCCTTAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaaatcaaacat                                         <  2:6118221‑M1/140‑100 (MQ=255)

                                                                                                   aTCCTCAATAAAAAACAATTCAGTTAATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaaaacaaacat                                         <  2:4401157‑M1/140‑100 (MQ=255)

                                                                                                   aTCATGAAGAAAAAACTATTCTCTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggatgacgtaacttatgaaaactgaaaatgcaaaaacaaatcatacat                                         <  2:6685153‑M1/140‑100 (MQ=255)

                                                                                                       tGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaaatcaaacattagt                                     >  2:4935779‑M1/1‑37 (MQ=255)

                                                                                                       tGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaaatcaaacattagt                                     >  2:970202‑M1/1‑37 (MQ=255)

                                                                                                       tGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaaatcaaacattagt                                     >  2:7010678‑M1/1‑37 (MQ=255)

                                                                                                         aagaaAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaaatcaaacattagttg                                   >  2:3665154‑M1/1‑35 (MQ=255)

                                                                                                         aagaaAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaaatcaaacattagttg                                   >  1:5780487‑M1/1‑35 (MQ=255)

                                                                                                         aagaaAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaaatcaaacattagttg                                   >  2:2590083‑M1/1‑35 (MQ=255)

                                                                                                         aagaaAAAACTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaaatcaaaaattagttg                                   >  2:1608281‑M1/1‑35 (MQ=255)

                                                                                                              aaaaCTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaaatcaaacattagttgagaat                              >  2:1249041‑M1/1‑30 (MQ=255)

                                                                                                                aaCTATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaactcaaacattagttgagaattc                            <  2:3883701‑M1/140‑113 (MQ=255)

                                                                                                                   tATTCAGTTCATCTAATTTATAATTtagtattgatttttaattaatacgtggtatatttaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaaatcaaccattagttgagaattcaat                         <  2:6337668‑M1/140‑116 (MQ=255)

                                                                                                                   tATTCAGTTCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaaatcaaacattagttgagaattcaat                         <  1:7065503‑M1/140‑116 (MQ=255)

                                                                                                                          ttCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaaatcaaacattagttgagaattcaatgaacaca                  >  2:5748636‑M1/1‑18 (MQ=255)

                                                                                                                          ttCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaaatcaaacattagttgagaattcaatgaacaca                  >  2:1883637‑M1/1‑18 (MQ=255)

                                                                                                                          ttCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaaatcaaacattagttgagaattcaatgaacaca                  >  2:2335143‑M1/1‑18 (MQ=255)

                                                                                                                           tCATCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaaatcaaacattagttgagaattcaatgaacacac                 <  1:4037340‑M1/140‑124 (MQ=255)

                                                                                                                             aTCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaaatcaaacattagttgagaattcaatgaacacacaa               <  2:5978999‑M1/140‑126 (MQ=255)

                                                                                                                             aTCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaaatcaaacattagttgagaattcaatgaacacacaa               >  2:5166178‑M1/1‑15 (MQ=255)

                                                                                                                             aTCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaaatcaaacattagttgagaattcaatgaacacacaa               >  2:2221472‑M1/1‑15 (MQ=255)

                                                                                                                             aTCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaaatcaaacattagttgagaattcaatgaacacacaa               <  2:4763185‑M1/140‑126 (MQ=255)

                                                                                                                             aTCTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaaatcaaacattagttgagaattcaatgaacacacaa               <  2:6970904‑M1/140‑126 (MQ=255)

                                                                                                                               ctcaattaTAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaaatcaaacattagttgagaattcaatgaacacacaatt             >  2:6981889‑M1/4‑13 (MQ=255)

                                                                                                                               cTAAATTATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaaatcaaacattagttgagaattcaatgaacacacaatt             >  2:2089930‑M1/1‑13 (MQ=255)

                                                                                                                                    ttATAATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaaatcaaacattagttgagaattcaatgaacacacaattatcaa        >  2:29752‑M1/1‑8 (MQ=255)

                                                                                                                                     tataATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaaatcaaacattagttgagaattcaatgaacacacaattatcaaa       <  1:2744905‑M1/140‑134 (MQ=255)

                                                                                                                                     tataATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaaatcaaacattagttgagaattcaatgaacacacaattatcaaa       <  1:7684753‑M1/140‑134 (MQ=255)

                                                                                                                                       taATTtagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaaatcaaacattagttgagaattcaatgaacacacaattatcaaact     >  1:649117‑M1/1‑5 (MQ=255)

                                                                                                                                          tttattattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaaatcaaacattagttgagaattcaatgaacacacaattatcaaactggt  <  1:5259275‑M1/140‑139 (MQ=255)

                                                                                                                                          tttagtattgatttttaattaatacgttttataattaaattaacagatcacaaggatgacgtaacttatgaaaactgaaaatgcaaaaacaaatgaaacattagttgagaattcaatgaacacacaattatcaaactggt  <  2:7278645‑M1/140‑139 (MQ=255)

                                                                                                                                          tttagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaccaaatcaaacattagttgagaattcaatgaacacacaattatcaaactggt  <  1:4184645‑M1/140‑139 (MQ=255)

                                                                                                                                          tttagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaactcaaacattagttgagaattcaatgaacacacaattatcaaactggt  <  1:6273992‑M1/140‑139 (MQ=255)

                                                                                                                                          tttagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaaatcaaacattagttgagaattcaatgaacacacaattatcaaactggt  <  2:6740130‑M1/140‑139 (MQ=255)

                                                                                                                                          tttagtattgatttttaattaatacgtggtataattaaattaacagatcacaaggaggacgtaacttatgaaaactgaaaatgcaaaaacaaatcaaacattagttgagaattcaatgaacacacaattatcaaactggt  <  2:649117‑M1/140‑139 (MQ=255)

ACAAAACAGCACGTAAAGAAATTGCGATACCCGATCGGAAAAGGCATCAAGCTTACCTTGTTATTCCGATCGCTTTTTCCTTGGTCTGCGTGGGAATCTATCCTGAAGAAAAAACTATTCAGTTCATCTAAATTATAATTATTATAATTTAGTATTGATTTTTAATTAATACGTGGTATAATTAAATTAACAGATCACAAGGAGGACGTAACTTATGAAAACTGAAAATGCAAAAACAAATCAAACATTAGTTGAGAATTCAATGAACACACAATTAT  >  NZ_CP034943/3191531‑3191808

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`