| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,375,849 | T→G | 5.5% | N263H (AAC→CAC) | trxB ← | thioredoxin‑disulfide reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,375,849 | 0 | T | G | 5.5% | 1242.7 / 9.2 | 480 | N263H (AAC→CAC) | trxB | thioredoxin‑disulfide reductase |
| Reads supporting (aligned to +/- strand): ref base T (144/289); new base G (45/2); total (189/291) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.42e-18 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 504 total aligned reads displayed.
TGGAGTTCTTCGACATAATGCTGAACGCTTTGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAATTCACTTTCTTCACCGGTTACCGTATCGACAAGCGTTA > NZ_CP034943/3375710‑3375986 | tGGAGTTCTTCGACATAATGCTGAACGCTTTGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCgtt < 2:3713220/140‑1 (MQ=255) ggAGTTCTTCGACATAATGCTGAACGCTTTGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCgttt > 1:1431471/1‑140 (MQ=255) ggAGTTCTTCGACATAATGCTGAACGCTTTGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTGTCGCGACTGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCgttt > 1:899009/1‑140 (MQ=255) ttcttcGACATAATGCTGAACGCTTTGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCgtttgttt < 2:3311321/140‑1 (MQ=255) ttcttcGACATAATGCTGAACGCTTTGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCgtttgttt > 2:2418818/1‑140 (MQ=255) ttcttcGACATAATGCTGAACGCTTTGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTGTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCgtgtgttt > 2:6589448/1‑140 (MQ=255) cttcGACATAATGCTGAACGCTTTGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCg > 1:1277045/1‑140 (MQ=255) cttcGACATAATGCTGAACGCTTTGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCg > 1:5655807/1‑140 (MQ=255) cttcGACATAATGCTGAACGCTTTGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTGTGTTTCg > 1:2738969/1‑140 (MQ=255) aCATAATGCTGAACGCTTTGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTa < 2:6888204/140‑1 (MQ=255) cATAATGCTGAACGCTTTGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTGTGTTTGGATTTat > 1:2982763/1‑139 (MQ=255) aTGCTGAACGGTTTGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTGTCGATGTTGCctt > 2:2138880/1‑140 (MQ=255) aTGCTGAACGCTTTGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAACATACCTTCAACCTTTGTTTCCATGCGGTCGGGTGTTTCGATGTAGCctt > 2:4023952/1‑140 (MQ=255) aTGCTGAACGCTTTGTGCCGCAATACTTCCGTCTCCTGGAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGGTTCCATGCGGTCGTTTGTTTCGATGTAGCctt < 2:1674247/140‑1 (MQ=255) tGCTGAACGCTTTGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATg < 1:6836060/132‑1 (MQ=255) aaCGCTTTGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCAt < 2:7464662/140‑1 (MQ=255) aaCGCTTTGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTGTGTTTCGATGTAGCCTTCTTCAt > 1:4754794/1‑140 (MQ=255) cTTTGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGt < 2:3394215/140‑1 (MQ=255) tttGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTa > 1:6519388/1‑140 (MQ=255) tttGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTa > 2:1020156/1‑140 (MQ=255) tttGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTa > 2:4257113/1‑140 (MQ=255) tgtgCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTAGATGTAGCCTTCTTCATTAGTAAt > 2:2116428/1‑140 (MQ=255) cAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGa > 1:7575209/1‑140 (MQ=255) cAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTAGTAATTCCCAGa > 2:6100877/1‑140 (MQ=255) cTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTGTGGTTCGCTGTAGCCTTGTTCATTCGTAATGCCCAGATTTTc > 2:584289/1‑140 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 1:1044220/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 2:2499569/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 1:7655305/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 1:621945/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 2:1415831/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 1:521543/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 1:1557406/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 2:801728/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 2:7575209/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 2:73928/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 2:6969419/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 1:2589145/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 1:3225672/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 1:3951790/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 2:5578686/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 2:5468431/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 2:5071277/140‑1 (MQ=255) ccGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATTCCCAGATTTTCGaa > 1:7386390/1‑140 (MQ=255) ccGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGaa < 1:963004/140‑1 (MQ=255) ccGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGaa > 1:5756132/1‑140 (MQ=255) ccGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTGTGTTTGGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGaa > 1:3448215/1‑140 (MQ=255) cGTCTCCTGGAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAAc < 1:69652/140‑1 (MQ=255) tctcCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACgg > 2:3287270/1‑140 (MQ=255) tcCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTGTGTTTCGCTGTAGCCGTCTTCATTCGTAATGCCCAGATTTTCGAACGGtt > 1:3733877/1‑140 (MQ=255) tcCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTGTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGtt > 1:1004357/1‑140 (MQ=255) gTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGa < 2:891555/140‑1 (MQ=255) gTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGa < 2:4624432/140‑1 (MQ=255) gTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGa < 1:388192/140‑1 (MQ=255) gTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGa < 1:7206905/140‑1 (MQ=255) gTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAAGGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGa < 1:4094662/140‑1 (MQ=255) gCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACag < 2:2933757/140‑1 (MQ=255) tACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 1:3595891/122‑1 (MQ=255) aTTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCAt < 2:4910318/140‑1 (MQ=255) aTTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTACTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCAt < 2:1277045/140‑1 (MQ=255) ttGGCGCAGTGATTTTTCGCGGATGTCTCCGGCAGCGAAAATCCCTTCAACCTTAGTTTCCATGCGGTCGTTTGTTTCGATATAGCCTTCTTCATTCGTAATGCCCAGGTTTTCAAACGGTTTAGACAGAGGAAGCATGc < 1:2100860/140‑1 (MQ=255) ttGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGc < 1:4636335/140‑1 (MQ=255) ttGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGc < 1:3798805/140‑1 (MQ=255) ttGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGc < 2:3799472/140‑1 (MQ=255) cgcAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTGTTTTCGATGTAGCCGTCTTCATTCGTAAAGCCCAGATTTTCGAAAGGTTTATCCGGAGGAAACATGCCGAt > 2:1575779/1‑140 (MQ=255) agggACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTa < 1:177339/137‑1 (MQ=255) tGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCCACCTTTGTTTCCATGCGGTCGTTTGTTTCGTTGGAGCCTTCTTCATTCCTAATGCCCAGCTTTTCGAAAGGTTTAGACAGAGGAAGCATGGCGATGTaaa > 2:1079797/1‑140 (MQ=255) tGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTGGTTGTATCCGTCTTCATTCGTAATGCCCAGTTTTTCGAACGGTTTAGACCGAGGAAGCATGCCGATGTaaa > 2:5629080/1‑140 (MQ=255) tttCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTGGTTTCCATGCGGTCGGGTGTGTGGTTGTGGCCGTCGTAATTAGGAAAGCCCAGAGTTTCGAACGGGTTTGACACGGGGATCATGCCGCTGGAAATGaaa > 1:2256944/1‑139 (MQ=255) ttCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATa < 1:185823/140‑1 (MQ=255) aaTGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa > 2:4443432/1‑95 (MQ=255) aaTGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 1:4443432/95‑1 (MQ=255) aaTGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGt < 1:6070267/140‑1 (MQ=255) aaTGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGt < 1:4963357/140‑1 (MQ=255) aaTGTCTCCGGCAGCGAAAATACCGTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTACCTCCTTCGTAATGCCCAGATTTTCGAACGCTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGt < 1:5914991/140‑1 (MQ=255) tGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGCTGTAGCCTTCTTCATTAGGAATGCCCAGATTTTGGAAAGGTTTATACAGAGGTAGCATGCCGATGTAAATTAAAAAGCCGTCt > 1:6164949/1‑140 (MQ=255) cAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAAt < 2:3073945/140‑1 (MQ=255) cGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTGTGTTTCGATGTTGCCTTCTTCATTCGTAATGCCCCGATTTTCGAACGGGTTAGACAGAGGAAGCATGCCGCTGTAAATGAATAAGCCGGCTGTTTTGAAttaa > 1:5105926/1‑138 (MQ=255) cGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTGTGTTTAGCTGTATCCTTCTTCATTCGTAAAGCCCAGATTTTCGAACGGTTTAGACACAGGAAGCATGCCGATTTAAATGAATACGCCGTGTGTTTTGAATTCa > 2:203191/1‑140 (MQ=255) aaaaTACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGAATTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAATTCACt > 2:6266392/1‑140 (MQ=255) tcccTTCAACCTTAGTTTCCATGCGGTCGTTTGTTTCGATATAGCCTTCTTCATTCGTAATGCCCAGGTTTTCAAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAATTCACTttct < 2:2289386/138‑1 (MQ=255) aCCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAATTCACTttctt < 2:5062276/140‑1 (MQ=255) ccTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAATTCACTttcttc < 1:6772707/140‑1 (MQ=255) ttCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTGGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATAAGCCGTCTGTTTTGAATTGACTTTGTTCAc > 2:4398849/1‑140 (MQ=255) ttCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAATTCACTTTCTTCAc > 2:1818374/1‑140 (MQ=255) ttGTTTCCATGCGGTCGTTTGTTTCGATGTATCCGTCTTCATTAGTAATTCCCCGATTTTGGAACGGTTTATACAGATGAAGCATTCCGATGTAAATTAAAAAGCCGTCTGTTTTTTATTAACTTTCTTCACCGGTTaac > 1:5578721/1‑138 (MQ=255) ttGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAATTCACTTTCTTCACCGGTTAcc < 1:5403910/140‑1 (MQ=255) tGTTTCCATGCGGTCGTTTTTTTCGATGTAGCCTTCTTCATTAGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATTAAAAAGCCGTCTGTTTTGAATTAACTTTCTTCACCGGTTAcag > 2:1202036/1‑138 (MQ=255) tGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATTCCCCGAATTTCGAAAGGTTTAGACAGAGGGAGCATGCCGAAGTAAATGAATAAGCCGTGTGTTTTTAATTAACTTTGTTCACCCGtttacg > 2:6779342/1‑136 (MQ=255) tGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTAATTCGTAATTCCCAGATTTTCGAAAGGTTTAGACAGAGGAAGCATGCCGATGTAAATTAATAAGCCGTCTTTTTTGTATTCAATTTGTTCACAGGTTaaag > 2:5950241/1‑137 (MQ=255) cATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAATTCACTTTCTTCACCGGTTACCGTATCGa < 1:247556/140‑1 (MQ=255) aTGCGTTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAATTCACTTTCTTCACCGGTTACCGTATCGAc < 2:5292596/140‑1 (MQ=255) aTGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAATTCACTTTCTTCACCGGTTACCGTATCGAc < 2:6719479/140‑1 (MQ=255) aTGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAATTCACTTTCTTCACCGGTTACCGTATCGAc < 2:7105519/140‑1 (MQ=255) aTGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAATTCACTTTCTTCACCGGTTACCGTATCGAc < 2:2960264/140‑1 (MQ=255) aTGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTATGTTTTTAATTAAATTTCTTCACCGGTTACCGTATCGAc < 2:2736448/140‑1 (MQ=255) aTGCGGTCGTTTGTTTAGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAAAGAATACGCCGTCTGGTTTGAATTAACTTTCTTCACCGGTTAACGTATAGAc > 2:7212816/1‑140 (MQ=255) aTGCGGTAGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCTAACTGTTTATACAGATGATTCATGCCTATGTTAATTAATACGCCGTCTGTTTTGAATTTAATTTATTCACCGGTTACCGTATCGAc < 2:6467841/140‑1 (MQ=255) cGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAATTCACTTTCTTCACCGGTTACCGTATCGACAAg < 2:2537663/140‑1 (MQ=255) gTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAATTCACTTTCTTCACCGGTTACCGTATCGACAAGcg < 1:4285191/140‑1 (MQ=255) cGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAATTCACTTTCTTCACCGGTTACCGTATCGACAAGcgtt < 1:2320318/140‑1 (MQ=255) | TGGAGTTCTTCGACATAATGCTGAACGCTTTGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAATTCACTTTCTTCACCGGTTACCGTATCGACAAGCGTTA > NZ_CP034943/3375710‑3375986 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |