| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,498,703 | G→T | 7.1% | intergenic (‑198/‑69) | manA ← / → EO946_RS18005 | mannose‑6‑phosphate isomerase, class I/spore germination protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,498,703 | 0 | G | T | 7.1% | 1102.7 / 9.5 | 456 | intergenic (‑198/‑69) | manA/EO946_RS18005 | mannose‑6‑phosphate isomerase, class I/spore germination protein |
| Reads supporting (aligned to +/- strand): ref base G (244/147); new base T (9/46); total (254/202) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.05e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 469 total aligned reads displayed.
CAAACGCCGGATAAGCTGTCTTTTTCCTATGACAACATATGTACAAAGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATC > NZ_CP034943/3498564‑3498843 | cAAACGCCGGATAAGCTGTCTTTTTCCTATGACAACATATGTACAAAGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATgaag < 1:69281/140‑1 (MQ=255) aCGCCGGATAAGCTGTCTTTTTCCTATGACAACATATGTACAAAGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGaat > 1:6395847/1‑140 (MQ=255) cGCCGGATAAGCTGTCTTTTTCCTATGACAACATATGTACAAAGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGaata > 2:5574739/1‑140 (MQ=255) cGCCGGATAAGCTGTCTTTTTCCTATGACAACATATGTACAAAGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGaata > 2:7219569/1‑140 (MQ=255) cGCCGGATAAGCTGTCTTTTTCCTATGACAACATATGTACAAAGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGaata > 2:1731415/1‑140 (MQ=255) cGCCGGATAAGCTGTCTTTTTCCTATGACAACATATGTACAAAGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGaata > 1:7188411/1‑140 (MQ=255) cGCCGGATAAGCTGTCTTTTTCCTATGACAACATATGTACAAAGCAGTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGaata > 2:577731/1‑140 (MQ=255) cGCCGGATAAGCTGTCTTTTTCCTATGACAACATATGTAAAAAGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCGTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAataata > 1:1747884/1‑140 (MQ=255) gATAAGCTGTCTTTTTCCTATGACAACATATGTACAAAGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATtct > 2:4925508/1‑140 (MQ=255) gATAAGCTGTCTTTTTCCTATGACAACATATGTACAAAGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATtct > 1:2546140/1‑140 (MQ=255) tGTCTTTTTCCTATGACAACATATGTACAAAGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCttttt < 1:3655028/140‑1 (MQ=255) aTGACAACATATGTACAAAGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTa > 2:2372784/1‑140 (MQ=255) aTGACAACATATGTACAAAGCATTATGTATCAATGACCCCATTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGACTTTTCCTTATTAAGAATAATTCTCCTTTTTTTATACAAATTa > 2:4703597/1‑140 (MQ=255) aacaTATGTACAAAGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGaaa < 1:1058240/140‑1 (MQ=255) tACAAAGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCa > 2:1115744/1‑140 (MQ=255) tACAAAGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACAGTCa > 2:2422974/1‑140 (MQ=255) cAAAGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAAt < 2:3186329/140‑1 (MQ=255) cAAAGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAAt < 2:1645423/140‑1 (MQ=255) cAAAGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAAt < 1:4678217/140‑1 (MQ=255) cAAAGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAAt < 1:4079009/140‑1 (MQ=255) cAAAGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAAt < 2:7398291/140‑1 (MQ=255) cAAAGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCATTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAAt < 2:6508718/140‑1 (MQ=255) cAAAGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTGTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAAt < 1:5423736/140‑1 (MQ=255) cAAAGCATTATGTATCAATGACCCCTTGTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCATCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAAt < 2:1179863/140‑1 (MQ=255) cAAAGCATTATGTATCAATGACCCCTATTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAAt < 1:766111/140‑1 (MQ=255) aaGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCt > 1:6594590/1‑140 (MQ=255) aGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTg > 1:3839680/1‑140 (MQ=255) aGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTg > 2:6423406/1‑140 (MQ=255) aGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTg > 1:5840145/1‑140 (MQ=255) aGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTg > 1:5046959/1‑140 (MQ=255) aGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTg > 2:5702337/1‑140 (MQ=255) aGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTg > 1:1418987/1‑140 (MQ=255) aGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATATg > 2:3989664/1‑140 (MQ=255) aGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAAACGTCAATCTg > 2:7047292/1‑140 (MQ=255) aGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCATTTTTTGATACAAATTATGAAAAAAAGTCACTCTg > 1:4589088/1‑140 (MQ=255) aGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATAACTTTCAATATAAGGTTTGTTTCAGACTTTTACTTATGAATAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAAACTg > 2:5969010/1‑140 (MQ=255) aGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATAACTTTCAATAGAACGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTTATACAAATTAAGAAAAACCGTCAATCTg > 2:5358636/1‑140 (MQ=255) cATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTAGATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGtt < 2:1858688/140‑1 (MQ=255) tATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATAAAAATTAAGAAAAACCGTCAATCTGTTTta > 2:6757586/1‑140 (MQ=255) tGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTtata < 2:141434/140‑1 (MQ=255) cAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAggg > 1:2469372/1‑140 (MQ=255) cAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAggg > 1:722762/1‑140 (MQ=255) cAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAggg > 1:2737761/1‑140 (MQ=255) cAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAggg > 2:3266398/1‑140 (MQ=255) gACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGgaga > 1:961913/1‑140 (MQ=255) aCCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATATAAGGTTTGTTTCAGCCTTTTCCGTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGgagag > 2:2563250/1‑140 (MQ=255) aCCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAAt < 1:1286045/120‑1 (MQ=255) aCCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGTtagag > 2:7340275/1‑140 (MQ=255) aCCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGgagag > 1:2017387/1‑140 (MQ=255) aCCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTATCCTTTTTTGATACAAATTAAGAAAAACCGTCAATATGTTTTATAAAGGGgagag > 2:3346029/1‑140 (MQ=255) aCCCCTTTTGAGAAAACCCTTCAGTTTTATTATATCACTTTCAATATAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATCCAATTTTAGAAAATCCGTCAATCTGTTTTATAAAggggcgtg > 1:3917793/1‑136 (MQ=255) cTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGaaaa > 2:6663005/1‑139 (MQ=255) tGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATg < 1:7726798/140‑1 (MQ=255) aaccGCTTCCTTTTTATTAAACCCCTTGCAATAGAAGGTTTGTTTCAGCCTTTACCTTATGAAGAATAATTCTCCTTTTTTGATAAAAATTAACAAAAACCGTCAATCTTTTTTATAACGGGGAGAGAAACTATGCAAAt < 2:4259944/137‑1 (MQ=255) aaaCGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCa < 2:156824/105‑1 (MQ=255) aaaCGCTTCATTTTTATTATATCACTTTAAATAGAAGTTTTTTTTCAGCCTTTTCCTTATTAATAATAATTCTCGTTTTTTTATAAAAATTAAGAAAAACCGTCAATCTTTTTTATAAAGGGGAGAGAAACTATGCAAAt < 1:6162820/140‑1 (MQ=255) aCGCTTCCGTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCg > 2:2699164/1‑140 (MQ=255) cTTCCTTTTTATTATATCACTTTAAATAGAAGTTTTGTTTCAGCCTTTTCCTTATGAATAATAATTATCCTTTTTTGATACAAATTAAGAAAAACCGTAAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGAct < 2:6338949/140‑1 (MQ=255) ccTTTTTATTTTATCACTTTAACTAGACGGTTTTTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGAAAATCGACTCTg < 1:1606008/140‑1 (MQ=255) ccTTTTTATAATATCACTTACAATCGAAGGTTTTTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATAAAAATTAAGAACAACCGACAATCGTTTTTATAAAGGGCAGATAAACTATGCAAATCGACTCTg < 1:6206454/140‑1 (MQ=255) catttttATTAAATCACTTACAATACAAGGTTTGTTCCACCATTTTCCTTATGAACAATAATTCACATTTTTTGATACAAATTAACAAAAACCGTAAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTg < 1:187742/138‑1 (MQ=255) ttattaTATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGAtctc < 2:7717580/140‑1 (MQ=255) tattatATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTcc > 2:2968578/1‑140 (MQ=255) ttatATCACTTTCATTATAAGTTTTGTTTATGCATTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCATTGTTTTTTATAATGGGGAGAGAAACTTTGCAAATCGACTCTGATCTCCAg < 2:3608066/140‑1 (MQ=255) ttatCACTTTCATTTGAAGTTTTGTTTCAGCCTTTTCTTTTTTAATAATATTTCTCTTTTTTTTATAAAATTTAATAAAAACCGTCAATCTTTTTTATAAAGGGTAGATAAACTTTGCAAATCGACTCTGATCTCCAGca < 1:3021497/139‑1 (MQ=255) atatCATTTTAAATATTAGGTTTGTTTCATCGTTTTAGTTATGATTAATAATTCTGATTTTTTTATACAATTTATGAAAAACCTTCAATGTGTTTTATAAAGGGGTGAGAAACTTTGCAAATCGACTCTGATCTCCAGca < 2:2531003/140‑1 (MQ=255) atatCACTTTCAATATATGTTTTGTTTCAGCCTTTTCCTTATGAATAATAATTCTCCTTTTTTGATAAAAATTAAGAAAAACCGTCAATCTTTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGca < 1:3257012/140‑1 (MQ=255) atatCACTTTCAATAGAAGTTTTGTTTCATCCTTTTCCTTATGAAGAATATTTATACTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGca < 2:3963263/140‑1 (MQ=255) atatCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAATGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGca < 1:2399512/140‑1 (MQ=255) atatCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAAATATGCAAATCGACTCTGATCTCCAGca < 2:7572400/140‑1 (MQ=255) atatCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAACAATAATTCTCATTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGca < 1:7480973/140‑1 (MQ=255) atatCACTTTCAATAGAAGGTTTGTTTCAGCATTTTCCTTATGCATAATAATTCTCTTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGca < 1:5321802/140‑1 (MQ=255) atatCAATTTCAATCTAAGGTTTGTTTCAGACTTTTCCTTATGAAGAATAATTCTCCTTTTTTCATAAAAATTAACAAAAACCGTCAATCGTTTTTATAAAGGGTAGAGAAACTATGAAAATCGACTCTGATCTCCAGca < 1:3103957/140‑1 (MQ=255) atatCAATTTAATTATATGTTTTTTTTCAGCCTTTTCCTTATGAATAATAATTCTCCTTTTTTCATAAAAATTAAGAAAAACCGTCAATCTTTTTTATAAAGGGGAGAGAAACTATGAAAATCGACTCTGATCTCCAGca < 1:2333175/140‑1 (MQ=255) tataACTTTCAATATAAGTTTTGTTTCAGCCTTTTCATTATTATTAATATTTCTCTATTTTTTATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGcac < 2:4560120/140‑1 (MQ=255) tatCACTTTCAATATAAGGTTTGTTTCAGCCTTGTCCTTATGAATAATAATTCTCCTTTTTTTATACAAGTTAAGAAAAACCGTCAATCTGTTTTATAAAGGGTAGAGAAACTATGAAAATCGAATCTGATCTCCCGcac > 2:826372/1‑140 (MQ=255) tatCACTTTCAATAGAAGTTTTTTTTCAGCCTTTTCCTTATTAAGAATATTTCTCCTTTTTTTATACAAATTAATAAAAACCGTCATTCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGcac < 2:5026226/140‑1 (MQ=255) tatCAATTTCAATAGAAGTTTTTTTTCATCATTTTCCTTATTAATAATATTTATCCTTTTTTGATACAAATTAAGAAAAACCGTCAATGTGTTTTATAAAGGGGACAGAAACTATGCAAATCGACTCTGATCTCCAGcac < 2:3075129/140‑1 (MQ=255) tatCAATTTAAATATAAGGTTTGTTTCAGCCTTTTCCTTATGAATAATAATTCTCCTTTTTTGATACAATTTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGATAAACTATGCAAATCGACTCTGATCTCCAGcac < 2:5934586/140‑1 (MQ=255) cTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAatat > 2:6118932/1‑140 (MQ=255) tCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGca > 2:37746/1‑131 (MQ=255) gAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACAtt > 2:2069131/1‑140 (MQ=255) gAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATATCAAGCACAATAAAGAAACAtt > 2:5245890/1‑140 (MQ=255) ggTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACAATGaa > 2:355792/1‑140 (MQ=255) ttgtttCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAata < 2:6888109/124‑1 (MQ=255) ttgtttCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAAACGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGaaaaa > 2:6804430/1‑140 (MQ=255) ccTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTggg > 1:4297907/1‑140 (MQ=255) ccTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTggg > 1:6063411/1‑140 (MQ=255) ttttCCTTATGAACAATAATTCACCTTTTTTGATAAAAATTAACAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGc < 1:5144802/140‑1 (MQ=255) ttCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCaa > 2:17690/1‑140 (MQ=255) tCCTTATGAAGAATAATTCTCCTTTTTTGATACACATTAAGAAAAACAGTCAATCTGTTGTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGCAACATGGAAAACAACATTGGGGCaaa > 1:7386669/1‑140 (MQ=255) ctaaTGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGATAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAAt < 1:7522774/137‑1 (MQ=255) ttgtaagaaTAATTCTCCTTTTTTCATAAAAATTAAGAAAAACGGTCAATGGGTTTTTTAAAGGGTTTATAACCTATGCAAATCGACTCTGATCTCCAGCACAATATATAAACATTGAAAAAAAAATTGGGGCAAAATGa < 1:3534605/136‑1 (MQ=255) tATTAAGAATAATTCTCATTTTTTGATAAAAATTAAGAAAAACCTTCAATCTTTTTTATAAAGGGGAGAGAAACTATGAAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGa < 1:1692118/140‑1 (MQ=255) tATGAAGAATATTTCTACTTTTTTTATAAAAATTAATAAAAACGTTAAATCTGTTTTATAAAGGGGAGAGAAACTATGAAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGa < 2:5165913/140‑1 (MQ=255) aTGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAGGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAAttag > 1:7584452/1‑137 (MQ=255) aTGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGAc > 1:6745058/1‑140 (MQ=255) tGAATAATAATTCTCCTTTTTTTATACAAATTAATAAAAACCGTCAATATGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACg < 1:838896/140‑1 (MQ=255) tGAAGAATAATTCTCCTTTTTTTATAAAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAACTCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACg < 1:4815559/140‑1 (MQ=255) gaagaaTAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGa < 1:5702337/140‑1 (MQ=255) | CAAACGCCGGATAAGCTGTCTTTTTCCTATGACAACATATGTACAAAGCATTATGTATCAATGACCCCTTTTGAGAAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATC > NZ_CP034943/3498564‑3498843 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |