| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,569,139 | C→T | 83.1% | M166I (ATG→ATA) | mbl ← | cell shape‑determining protein Mbl |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,569,139 | 0 | C | T | 83.1% | 1324.6 / 234.4 | 537 | M166I (ATG→ATA) | mbl | cell shape‑determining protein Mbl |
| Reads supporting (aligned to +/- strand): ref base C (36/55); new base T (207/239); total (243/294) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.49e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 | |||||||||||
Only 100 of 543 total aligned reads displayed.
GTTGCGACTTTAACCTTAATATCTTCTGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCCATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCAAGGTACACATGTTTACCGCCGCT > NZ_CP034943/3569002‑3569276 | gTTGCGACTTTAACCTTAATATCTTCTGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTAt < 1:1850803/140‑1 (MQ=255)gTTGCGACTTTAACCTTAATATCTTCTGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCCAt < 2:6019091/140‑1 (MQ=255) tGCGACTTTAACCTTAATATCTTCTGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGAGAATATCGCCCATTg > 1:6451350/1‑140 (MQ=255) tGCGACTTTAACCTTAATATCTTCTGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTg > 1:6856680/1‑140 (MQ=255) tGCGACTTTAACCTTAATATCTTCTGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCCATTg > 1:4658099/1‑140 (MQ=255) ttAACCTTAATATCTTCTGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCCATTGAAATAAc < 2:2818796/140‑1 (MQ=255) ccTTAATATCTTCTGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACcgcg < 2:2953150/140‑1 (MQ=255) tAATATCTTCTGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGata > 1:4857215/1‑140 (MQ=255) aagatCTTCTGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGatat < 1:1305649/137‑1 (MQ=255) aaTATCTTCTGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGatat > 1:1124261/1‑140 (MQ=255) aaTATCTTCTGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGAGGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATCGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGatat > 1:3610134/1‑140 (MQ=255) tcttctGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCcgt < 1:2801423/140‑1 (MQ=255) tctGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCcgtcgt > 1:3852770/1‑140 (MQ=255) tctGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCcgtcgt > 2:1295172/1‑140 (MQ=255) tctGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCcgtcgt > 1:5965655/1‑140 (MQ=255) tctGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCcgtcgt > 1:7320929/1‑140 (MQ=255) tctGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCcgtcgt > 1:7616892/1‑140 (MQ=255) tctGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCcgtcgt > 2:7279820/1‑140 (MQ=255) tctGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCcgtcgt > 1:251777/1‑140 (MQ=255) tctGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAAACGCGATATCcgtcgt > 1:6365700/1‑140 (MQ=255) ctGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTACTTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCgtcgtc > 2:5102798/1‑140 (MQ=255) tGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTcc < 1:3737640/140‑1 (MQ=255) tGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTcc < 1:2968959/140‑1 (MQ=255) tGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCCATTGAAATAACCGCGATATCCGTCGTcc < 1:4181928/140‑1 (MQ=255) tGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCCATTGAAATAACCGCGATATCCGTCGTcc < 1:5019313/140‑1 (MQ=255) gCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTccc > 1:223051/1‑140 (MQ=255) cAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCg > 2:6735790/1‑140 (MQ=255) cAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCCATTGAAATAACCGCGATATCCGTCGTCCCg > 2:5420863/1‑140 (MQ=255) tACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCt > 1:6069767/1‑140 (MQ=255) gTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCg < 2:3987461/140‑1 (MQ=255) gTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCg < 1:5168509/140‑1 (MQ=255) gTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCg < 1:1702779/140‑1 (MQ=255) gTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCCATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCg < 1:6683504/140‑1 (MQ=255) gTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCCATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCg < 1:3281260/140‑1 (MQ=255) gTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACGTGTCCCCAGCCATTTTAATAGCAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCg < 1:6927633/140‑1 (MQ=255) tCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGAt > 2:1946517/1‑140 (MQ=255) tCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGAt < 1:4753806/140‑1 (MQ=255) tCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGAt < 1:1052202/140‑1 (MQ=255) tCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGAt > 2:6458784/1‑140 (MQ=255) gCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCCATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGt > 2:5233074/1‑140 (MQ=255) gCCGAACAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCCATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGt < 2:5314874/140‑1 (MQ=255) aTCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTAc < 2:2528349/140‑1 (MQ=255) tCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCCATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACa > 2:1587876/1‑140 (MQ=255) cTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGt > 2:6382169/1‑140 (MQ=255) tGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTa > 1:6503223/1‑140 (MQ=255) cTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGc < 2:3320082/140‑1 (MQ=255) gTTTGATGTAATTTAAGATTTCCTTGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCCATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGc < 2:6224753/140‑1 (MQ=255) gTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTAc > 1:3444948/1‑121 (MQ=255) gTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGc < 2:6162161/140‑1 (MQ=255) gTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGc < 2:5508727/140‑1 (MQ=255) tGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTgg > 1:5546422/1‑140 (MQ=255) aTGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGaa < 2:1124261/140‑1 (MQ=255) tGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAat < 1:1582553/140‑1 (MQ=255) tGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAat < 2:3181515/140‑1 (MQ=255) tGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCCATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAat < 1:4358831/140‑1 (MQ=255) tGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCCATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAat < 1:2684765/140‑1 (MQ=255) tGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAAGAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAat < 1:4513684/140‑1 (MQ=255) taaatgaaGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGAGGTCTACACCCATGTTACCGCTTGGCTGGAatat < 1:4073313/134‑1 (MQ=255) tAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAatat < 2:4132834/140‑1 (MQ=255) aTTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATAttt > 2:27131/1‑140 (MQ=255) tCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCCATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCcgc > 1:2284932/1‑140 (MQ=255) ctggTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCgg < 2:4994951/137‑1 (MQ=255) cTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCgg < 1:1428153/140‑1 (MQ=255) cTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCgg < 1:4470941/140‑1 (MQ=255) cTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCCATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCAGGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCgg < 2:3709015/140‑1 (MQ=255) ttGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGTCTGGAATATTTCCATACCCGCGCCGATAGCGGc < 2:2477982/140‑1 (MQ=255) ttGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGc < 1:5696293/140‑1 (MQ=255) gtcaacAGCAATTTTAATAGAAGATGACTTTAAAATATCTCCCATTGAAATAACAGCGATATCCGTCGTCCCGCCTCCGAAGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATAACCGCGCCGATAGCGTCaa > 2:2073419/6‑140 (MQ=255) cAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTa < 2:3744164/140‑1 (MQ=255) aGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAat > 1:5100987/1‑106 (MQ=255) aGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCCATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAg > 2:7037674/1‑140 (MQ=255) caatatAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATGTCCATACCCGCGCCGATAGCGGCAACTTTAGGtt < 2:921938/135‑1 (MQ=255) cATTTTAATAGAAGCGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGtt < 2:4388741/140‑1 (MQ=255) tAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATCGCGGCAACTTTAGGTTCTTCTTCa < 1:7699555/140‑1 (MQ=255) tAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCa < 2:4250819/140‑1 (MQ=255) tAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCa < 2:4648361/140‑1 (MQ=255) tAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCa < 2:7552111/140‑1 (MQ=255) tAGAAGAGGAGGTGACAATATCGCCCATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACTACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCa < 2:1235285/140‑1 (MQ=255) tAGAAGAGGAGGTGACAATATCGCATATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCa < 1:2083348/140‑1 (MQ=255) tAGAAGACGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCCTGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCa < 1:720921/140‑1 (MQ=255) aagaGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCAAgg > 2:3569802/1‑140 (MQ=255) gaggagGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAat < 1:5269536/90‑1 (MQ=255) gaggagGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGACTATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCAAGGTa > 2:7467397/1‑140 (MQ=255) gaggagGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCAAGGTa > 2:6571687/1‑140 (MQ=255) gaggagGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCAAGGTa < 1:7087203/140‑1 (MQ=255) gaggagGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCAAGGTa > 2:2182676/1‑140 (MQ=255) gaggagGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCAAGGTa < 2:4808219/140‑1 (MQ=255) ggaggTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCGTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCAAGGTaca < 2:2342571/140‑1 (MQ=255) ggaggTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCAGGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCAAGGTaca < 2:790213/140‑1 (MQ=255) gaggTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGACTACAACCATGTTACCGCTAGGCTGGAATATTTCCATACACGCGCCGATAGCGGCAACTTTAGGTTCATCTTCAAGGTacac > 2:4335326/1‑140 (MQ=255) gTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCAAGGTACACATg > 2:6942571/1‑140 (MQ=255) tatCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCAAGGTACACATGTTTAccg > 1:796307/1‑140 (MQ=255) tatCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCAAGGTACACATGTTTAccg > 2:5790866/1‑140 (MQ=255) tatCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCAAGGTACACATGTTTAccg > 2:7659486/1‑140 (MQ=255) tatCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCAAGGTACACATGTTTAccg > 2:4553287/1‑140 (MQ=255) tatCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTGTAGGTTCTTCTTCAAGGTACACATGTTTAccg > 2:1029197/1‑140 (MQ=255) cGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCAAGGTACACATGTTTAccgccg > 2:1384398/1‑140 (MQ=255) gCCCATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCAAGGTACACATGTTTACcgccgc > 2:1704043/1‑140 (MQ=255) cccATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCAAGGTACACATGTTTACCGCCGCt > 2:1485661/1‑140 (MQ=255) cccATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCAAGGTACACATGTTTACCGCCGCt > 2:1837319/1‑140 (MQ=255) | GTTGCGACTTTAACCTTAATATCTTCTGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCCATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCAAGGTACACATGTTTACCGCCGCT > NZ_CP034943/3569002‑3569276 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |