| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,584,291 | G→T | 5.6% | S324S (TCG→TCT) | EO946_RS18420 → | N‑acetylneuraminate synthase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,584,291 | 0 | G | T | 5.6% | 1788.6 / 17.6 | 656 | S324S (TCG→TCT) | EO946_RS18420 | N‑acetylneuraminate synthase family protein |
| Reads supporting (aligned to +/- strand): ref base G (296/293); new base T (3/63); total (300/356) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.39e-14 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 662 total aligned reads displayed.
TGACAGCCAACCAGAATATAAAAAAAGGAGAAATCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTA > NZ_CP034943/3584152‑3584429 | tgACAGCCAACCAGAATATAAAAAAAGGAGAAATCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCg < 2:2372146/140‑1 (MQ=255) gACAGCCAACCAGAATATAAAAAAAGGAGAACTCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCACCTGCTGATTTATCGt < 2:1610354/140‑1 (MQ=255) gACAGCCAACCAGAATATAAAAAAAGGAGAAATCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGt > 1:4692787/1‑140 (MQ=255) ccAACCAGAATATAAAAAAAGGAGAAATCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAAc > 1:6718530/1‑140 (MQ=255) ccAACCAGAATATAAAAAAAGGAGAAATCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTAAAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGATAAAc > 2:4383644/1‑140 (MQ=255) ccAACCAGAATATAAAAAAAGGAGAAATCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTAAAAGACGAGGACGCATTTACTCAAGTAGCAACTGATGATTTATCGTTaaaa > 2:7238288/1‑139 (MQ=255) aaCCAGAATATAAAAAAAGGAGAAATCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCa > 2:785754/1‑140 (MQ=255) aaCCAGAATATAAAAAAAGGAGAAATCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCa > 2:1907710/1‑140 (MQ=255) aaCCAGAATATAAAAAAAGGAGAAATCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCa < 2:3561959/140‑1 (MQ=255) aCCAGAATATAAAAAAAGGAGACATCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAg < 1:4306317/140‑1 (MQ=255) ccAGAATATAAAAAAAGGAGAAATCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGc < 2:4611638/140‑1 (MQ=255) aaaaaaaGGAGAAATCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTacac > 1:5086623/1‑140 (MQ=255) aaGGAGAAATCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAg > 2:6638769/1‑125 (MQ=255) aaGGAGAAATCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAAc > 2:910391/1‑140 (MQ=255) ggAGAAATCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGa > 2:533598/1‑140 (MQ=255) ggAGAAATCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGa > 2:1762435/1‑140 (MQ=255) aTCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATaaa < 1:3170635/140‑1 (MQ=255) aTCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATaaa < 2:2304216/140‑1 (MQ=255) aTCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATaaa < 2:5684659/140‑1 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAAt > 2:4986311/1‑140 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAAt > 2:5230676/1‑140 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAAt > 2:6117115/1‑140 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAAt > 1:7751117/1‑140 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAAt > 1:1059349/1‑140 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAAt > 1:3089094/1‑140 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAAt > 1:3405835/1‑140 (MQ=255) aaaaCAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGc > 2:3721839/1‑140 (MQ=255) aaCAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCCTTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCCACGAAATAAAAAGTCTAAGAATTGCGa > 2:1130006/1‑140 (MQ=255) aaCAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTgaga > 2:4106394/1‑140 (MQ=255) aaCAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGa > 2:2446375/1‑140 (MQ=255) aaGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTg < 2:6939629/140‑1 (MQ=255) aGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGc > 1:5907685/1‑140 (MQ=255) gCTCCACAAGATGCGGAAATGAGAATGCATTAATTCCTTTACAATCCGAGGACTCATTTCCTCAAGTAGCAACTGCTGATTTATCCTTAAACCAGCCCATTACACCCAACGAAAAAAAAAGTCTAAGAAATGCGATTCCa > 2:7359059/1‑140 (MQ=255) gCTCCAAAAGATGCGGAACTGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa > 1:299722/1‑140 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAATCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACAACCAACGAAATAAAAAGTCTAAGACTTGCGATTGCa > 1:3858399/1‑140 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa < 2:5533345/140‑1 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa > 2:2601335/1‑140 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa > 2:2212565/1‑140 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa < 1:2483127/140‑1 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa < 1:910391/140‑1 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa > 1:4064550/1‑140 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa > 1:7095699/1‑140 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa > 1:6841114/1‑140 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAACAATTGCGATTGCa > 2:449158/1‑140 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCAATACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa > 2:716821/1‑140 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCC‑CAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAg > 2:3452834/1‑140 (MQ=255) tCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGt < 1:6500343/140‑1 (MQ=255) cAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGa > 2:1263687/1‑140 (MQ=255) gCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAgg > 2:7448853/1‑140 (MQ=255) ggAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTGTCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCt > 2:416842/1‑140 (MQ=255) ccTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTTCAGTGATATGTAGGCTAAAATCGACTAGACTTCCGaa > 2:5871326/1‑140 (MQ=255) tttACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCAAAAATCGACTCGTCTGCCGaaaa > 2:6744892/1‑140 (MQ=255) tttACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACACAACGAAATAAAAAGTCTAAGAATTGCGATAGCAGTGATATGTAGGCTAAAATCGAATCTTCTGCCGaaca > 2:6247070/1‑138 (MQ=255) ttACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGaaaaa > 1:5247570/1‑140 (MQ=255) aCAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAg > 2:1047380/1‑140 (MQ=255) gCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCgct > 1:7416920/1‑140 (MQ=255) ccGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCATTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAATCgctg > 2:3212761/1‑140 (MQ=255) ccGAGGACGCATTTCCACAAGTAGCAACTGCTGATTTATCGTTAAACCACCCCATTACACCCACCGAAAAAAAAAGAATAAGAATTGCGATTGCAGTGATATGTAGGCTAAACTCGACTCGTCTGCCGAAAAAAGCgctg < 1:1677241/140‑1 (MQ=255) cGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCgctgc > 1:1422037/1‑140 (MQ=255) cggACGCATTTCCTCACGTAGCAACTGCTGATTTATCGTTAAACCAGCCAATTACACCCACCGAAAAAAACAGTCTAAGAATTTCGATTGCAGTCTTTTTTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTc < 2:752852/139‑1 (MQ=255) atgACGCTTTTGCTAAATTAGCAGCTGATTTTTTATTTTTAAACACGCCAATTACACCAAACTAATTAAAAAGTCTAATAATTGCTTTTGCATTTTTTTGTAGGGTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTc < 1:270176/138‑1 (MQ=255) aGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAATTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTc > 1:1277711/1‑140 (MQ=255) aGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTc < 2:7080625/140‑1 (MQ=255) aGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTc > 2:7658019/1‑140 (MQ=255) aGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTc < 2:4893138/140‑1 (MQ=255) aGGACGCATTTCCTAAATTAGCAACTGCTGATTTATCTTTAAACCAGCCCTTTACACCAAAGGAAATAAAAAGTCTAATAATTGCGATTGCTTTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTc < 1:6117115/140‑1 (MQ=255) aGGACGAATTTCCTCAAGTAGAAACTGCTTATTTAACGTTAAACCACCAAATTACACCCAACCAATTAAAAAGTCTAATAATTCCGATTGCAGTGATATGTAGTCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTc < 1:3721839/140‑1 (MQ=255) ggACTCATTTCCTAAAGTAGAAACTGGTTTTTTTTCTTTAAACCAGCCCATTACACCCAACGAAAAAAAAAGTATAATATTTGCGATTGCAGTTATATGTAGGATAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTcc < 1:2392125/140‑1 (MQ=255) ggACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCCGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTcc < 2:3872717/140‑1 (MQ=255) ggACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCTATTGAATTGATATGTAGGCTAAACTCGACTCGTCTGCCGAAAAAAGCGCTGCTcc < 1:349689/140‑1 (MQ=255) aCGAATTTCCTAAAGTAGCAACTGCTTATTTATCTTTAAACCAGCCCATTACACCCAACTAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCt < 2:6820147/140‑1 (MQ=255) tcATTTCCTAAAGTAGAAACTGCTTATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTAt < 2:2009167/139‑1 (MQ=255) gaaTTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCACCCAATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGTTTGCAGTGATATGTAGGATAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTAt < 1:4816192/138‑1 (MQ=255) gCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGGCTAAGATTTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTAt < 2:2845342/140‑1 (MQ=255) gCATTTCATCAAGTAGCAACTGCTGTTTTATCGTAAAACCACCCCTTTACACCCAACGAAATAAAACGTCTAAGAATTGCGATTGCAGTTATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTAt < 2:3092008/140‑1 (MQ=255) aTTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGAGATTGCAGTGATATGTAGGCTAAAATCGACTCTTCTGCAGAAAAAAGCTCTTCTCACTAttt > 2:6486987/1‑140 (MQ=255) tttCCTCAAGTAGCAACTGCTTATTTATCTTTAAACCAGCCCATTACACCCAACGAAATAAAACGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTa < 1:5437071/140‑1 (MQ=255) tttCCTCAAGTAGCAACTGATGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTa < 1:4463053/140‑1 (MQ=255) ttCCTCATGTAGCAAGTGCTTTTTTGTCTTTAAACCAGCCAATTACACCCAACTAAAAAAAAAGTTTAAGAATTGCGATTGCAGTTATATGTCGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTAc < 1:416842/140‑1 (MQ=255) ttCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTAc < 1:1792397/140‑1 (MQ=255) ttCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCAAACTAAATAAAACGTCAACTAATTGCGATTGCCTTGATATGTAGGATAAACTCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTAc < 2:5421533/140‑1 (MQ=255) ttCCTCAAGTAGAAACGGCGGATTTTACGTAAACCCACCCCATTACCCCCAACGAAATAAAAAGTCTACTAATGGCGTTTGCCGTGATTTGTTGGATAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTAc < 1:7713413/140‑1 (MQ=255) ttCCTAAAGTAGCAACTGCTGATTTATCGTTAAACCACCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAACTCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTAc < 2:4822960/140‑1 (MQ=255) ttCCTAAAGTAGAAACTTCTTATTTATCGTTAAACACGCCCTTTACCCCCCACGAAATAAAAAGTCTAACAATTGCTATTGCAGTGATATGTAGGATAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTAc < 1:1204614/140‑1 (MQ=255) taccTCAATTAGCAACTGCTGATTTATCGTTAAACCCGCCCAGTACACCCAACCAAATAAAAAGTCTAAGAATGGCTATTGCAGTGAAATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTAc < 1:3313898/138‑1 (MQ=255) ctaaaGTAGCAACTGCTTATTTTTCTTTAAACCAGCCCATTACACCCAACGAATTAAAAAGTCTAAGATTTGCGTTTGCTGTGATATGTAGGCTAAACTCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGt < 2:473841/137‑1 (MQ=255) ctaaaGTAGCAACTGCTGATTTATCGTAAAACCAGCCCATTACCCCCCACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTTATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGt < 2:2926897/137‑1 (MQ=255) cTCAAGTATAAACTGCTTATTTATCTTTAAACCAGCCCATTACACCCACCCAAATAAAAAGTCTAAGAATTGCGATTGCAGTTATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGt < 1:6952954/140‑1 (MQ=255) cTCAAGTAGCAAGTGCTGTTTTATGGTTAAACCAGCCCATTACACCCAACTAAATAAAAAGTCTAAGATTTGCGATTGCAGTTATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGt < 1:7539902/140‑1 (MQ=255) cTCAAGTAGCAACTGCTTATTTATCGTTAAACCAGCCCATTCCACCCAACCAAATAAAAAGTCTAAGAATTGCGATTGCAGTTATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGt < 1:5586245/140‑1 (MQ=255) gTAGCAACTGCTGATTTATCGTTAAACCACCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATAGGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATAcc < 1:5709994/140‑1 (MQ=255) aGCAACTGCTGATTTATCTTTAAACCAGCCCATTACACCCAACTAAATAAAAAGTATAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCAt < 1:7196743/140‑1 (MQ=255) aGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAACTCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCAt < 1:2274599/140‑1 (MQ=255) aGCAACTGCTGATTTATCGTAACACCAGCCCATTACACCCAACGAAAAAAAACGTCTACCAATTGCGTTGGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCAt < 1:379055/140‑1 (MQ=255) cAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAGATCGACTCGTCTGCCGAAAAAAGCGCTGCTc > 1:1029250/1‑119 (MQ=255) tgctgATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGACGAAAAAAGCGCTGCTCACTATTTACGGTATACCATCTGTTg > 2:3311280/1‑140 (MQ=255) ctgATTTATCGTTAAACCAGCCCATTACACCCACCGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTTGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTAt < 2:1498716/118‑1 (MQ=255) ctgATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGaa > 1:6256221/1‑140 (MQ=255) ctgATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGaa > 1:2113322/1‑140 (MQ=255) ctgATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGaa > 1:4937889/1‑140 (MQ=255) | TGACAGCCAACCAGAATATAAAAAAAGGAGAAATCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTA > NZ_CP034943/3584152‑3584429 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |