| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,790,764 | T→G | 13.4% | N203H (AAC→CAC) | EO946_RS19525 ← | BglG family transcription antiterminator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,790,764 | 0 | T | G | 13.4% | 1185.4 / 62.1 | 488 | N203H (AAC→CAC) | EO946_RS19525 | BglG family transcription antiterminator |
| Reads supporting (aligned to +/- strand): ref base T (49/357); new base G (80/2); total (129/359) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 0.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 495 total aligned reads displayed.
TATTCTTTTTGATGCAGGATATGATCCATATCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTACCTCATCTG > NZ_CP034943/3790625‑3790899 | tttttGATGCAGGATATGATCCATATCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATCGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGtgtttga > 1:4580270/1‑138 (MQ=255) tttttGATGCAGGATATGATCCATATCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGtttttta > 1:6530842/1‑138 (MQ=255) tttGATGCAGGATATGATCCATATCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCAtt < 1:1147510/140‑1 (MQ=255) tttGATGCAGGATATGATCCATATCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTGAtt > 1:1042801/1‑140 (MQ=255) gATGCAGGATATGATCCATATCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCAttttt > 2:3244093/1‑140 (MQ=255) aGGATATGATCCATATCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAg < 2:3350699/140‑1 (MQ=255) gacaggATCCATATCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGa < 1:4243866/135‑1 (MQ=255) gATATGATCCATATCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTCTATTTTTTGAgta > 1:2841028/1‑138 (MQ=255) gATCCATATCTTCCGGGAAATGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTGATTTTTTTAAGGATAGCg > 2:5536383/1‑140 (MQ=255) atatCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTAATTTTTTTTATGATGGGGGaaag > 2:2857629/1‑138 (MQ=255) atatCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTCATTTTTTTAAGGATGGCGGAACg > 2:3595370/1‑140 (MQ=255) atatCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTAAGTCCCAAGTTGGACAGAGGGATTCGGTCGTTTTTCATTTTTTTAAGTCATGCGGAACg > 2:3506158/1‑140 (MQ=255) tatCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGGTTGATTTTTTTGAGGGTGGCGGGACgg > 1:5431748/1‑140 (MQ=255) atCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGga > 2:4463319/1‑140 (MQ=255) atCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTGATTTTTTTTAGGTTTGGGGGACGga > 1:7100483/1‑140 (MQ=255) tCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGAGAGAGGGATGCGGTCGTTTTTCATTTTTTTGAGGATGGAGGAAAGgatgtt > 2:3828145/1‑138 (MQ=255) tCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTTTTTTTTTTTAGGGTTGGGGGACgggatat > 1:224974/1‑135 (MQ=255) tCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTGATTTTTTTTAGGGTGGGGGGAAGgatgat > 1:3319225/1‑140 (MQ=255) tCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGGTTTATTTTTTTGGTGCTGTCGGAAAGgattag > 1:4003762/1‑137 (MQ=255) ccGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTTATTTTTTTAAGGATGGCGGCACGgatgata > 2:4103995/1‑139 (MQ=255) ccGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTGATTTTTTTAATGATTGGGGAAAGgatgata > 2:4033762/1‑139 (MQ=255) ccGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTGATTTTTTTAATGATTGCGGAACAGCTGAtc > 2:7415777/1‑140 (MQ=255) ccGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTGATTTTTTTAATGATGGCGGAACggcggata > 2:3066685/1‑134 (MQ=255) tACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATTATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCAt < 2:5208499/140‑1 (MQ=255) gTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCa < 1:7543651/140‑1 (MQ=255) gTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCa < 2:1692706/140‑1 (MQ=255) ttttGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTTATTTTTTTTATGATGGGGGAACGGATGATATCAATTTATTAAtttttgaa > 1:789744/1‑135 (MQ=255) cGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAatat < 1:5059509/140‑1 (MQ=255) cGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAatat < 1:1381296/140‑1 (MQ=255) tCTGATCCGTTTACAGGCGATAGAGATATGGAGGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAg < 2:157876/140‑1 (MQ=255) tGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTGATTTTTTTCAGGATTGCGGAAACGCTGATCTCGATTTATTCAATTGGCAAAATATCAGcc > 2:7077623/1‑140 (MQ=255) gATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCt < 2:2322176/140‑1 (MQ=255) tCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCttt < 1:2708523/140‑1 (MQ=255) gTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTttca < 2:2417719/140‑1 (MQ=255) ttACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTttcatt < 1:3618204/140‑1 (MQ=255) tGGATGATGCGGTTCTTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGt < 1:7422693/140‑1 (MQ=255) tGGATGATGAGGTTATTCAGTGCCTAGTTGGACAGAGTGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATAAGCCTTTTCATTCAGAACATCAATCTCCGt < 1:6589915/140‑1 (MQ=255) tGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGt < 1:1584461/140‑1 (MQ=255) tgatgaGGTTATTCAGTCCCAAGTTTGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTtct < 2:6022410/140‑1 (MQ=255) ggatgaGGTTAGTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTtct < 1:4378721/139‑1 (MQ=255) gaGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTACATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCttt < 1:3510297/140‑1 (MQ=255) aGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTc < 1:5484349/140‑1 (MQ=255) gTTATTCAGTCCCAATTTGTACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGCACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGACTTTTCATTCAGACCTTCAATCTCCGTTTCTCTTACAt < 2:5006160/140‑1 (MQ=255) gTTATTCAGTCCCAAGTTGGACAGAGGTATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCAt < 2:6965335/140‑1 (MQ=255) gTTATTCAGTCCCAAGTTGGACAGAGGGATGCGTTCGTTTTTCATTTTTTTCAGCATGGCGGAACGGATGATCTCGATGTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCAt < 2:5411187/140‑1 (MQ=255) gTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTGATTTTTTTGAGGATTGCGGAACGGATGATTTCGATTTCTTGATTTTGGAAAATATCAGCCGTTTGATTCAGAAAATAAATAACCGGTTCTCTGTCag > 2:1784118/1‑139 (MQ=255) gTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCAt < 1:1925694/140‑1 (MQ=255) gTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCAt < 1:1458508/140‑1 (MQ=255) gTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCAt < 1:3088783/140‑1 (MQ=255) gTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCAt < 2:3760524/140‑1 (MQ=255) gTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCAt < 2:810782/140‑1 (MQ=255) gTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTAGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCAt < 2:2566817/140‑1 (MQ=255) ttATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTAAATTTTTTGAGGGTGGGGGAAAGGCTGGTATAGATTTATTCATTTTGGAAAAAATCAGCCTTTTCAATAAGAACAACAAACTCCGTGTGTCTTTGAta > 2:6146402/1‑139 (MQ=255) tATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTGTTTCATTTTTTTGATGTTGGCGGCACGGCTTATCTCGATTTATTTATTTTTCAAAAAATAAGCCTTTTCATTCAGAAAAACAAAATCCCGTTCTCTTTAATCg > 2:3983353/1‑140 (MQ=255) aTTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGa < 2:2107866/140‑1 (MQ=255) tCAGTCCCAATTTTGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATTATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACa < 2:1161797/140‑1 (MQ=255) tCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACa < 2:1395771/140‑1 (MQ=255) tCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACa < 2:1212628/140‑1 (MQ=255) tCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACa < 1:6278537/140‑1 (MQ=255) tCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTAGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACa < 1:2552952/140‑1 (MQ=255) cAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACaa < 1:3747625/140‑1 (MQ=255) cccAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTa < 1:210511/140‑1 (MQ=255) cccAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTa < 1:2448900/140‑1 (MQ=255) cccAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTa < 2:6864309/140‑1 (MQ=255) cccAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTa < 1:5825325/140‑1 (MQ=255) cccAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTa < 1:1780510/140‑1 (MQ=255) ccAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTAc < 1:383922/140‑1 (MQ=255) ccAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTAc < 1:5601845/140‑1 (MQ=255) ccAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTAc < 1:1225865/140‑1 (MQ=255) cAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAGCATCAATCTCCGTTTCTCTTTCATCGACAATGTACt < 2:6242988/140‑1 (MQ=255) cAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACt < 1:3247298/140‑1 (MQ=255) cAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACt < 2:5652029/140‑1 (MQ=255) aaGTTGGACAGAGGGATGCGGTCGTGTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTc < 2:4323114/140‑1 (MQ=255) aGTTGGACAGAGGGATGCGGTCGTTTTTAATTTTTTTGAGGCTGGGGGAAAGGATTATCTAGATTTGTTCATTTGTGAAAAAATAAGCCGTTTGATTGATAACAAAAATATCCCGTTGTATTTGATCGAACATGttatac > 2:4701408/1‑135 (MQ=255) gTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCg < 2:1844359/140‑1 (MQ=255) gTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCg < 2:530657/140‑1 (MQ=255) gTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCg < 1:5984437/140‑1 (MQ=255) gTTGGACAGAGGGATGCGGTCGTTTGTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCg < 1:4845856/140‑1 (MQ=255) cttGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCGTCATTTGGCACACTATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCg < 1:1996063/139‑1 (MQ=255) tGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTATTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGcc < 2:7609545/140‑1 (MQ=255) ggACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCa < 1:4111951/140‑1 (MQ=255) ggACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCa < 1:7666965/140‑1 (MQ=255) ggACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCa < 2:5684903/140‑1 (MQ=255) ggACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCa < 2:572096/140‑1 (MQ=255) ggACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCAGTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCa < 1:7019566/140‑1 (MQ=255) cAGAGGGATGCTGTCTTTTTTCATTTTTTTCAGGATGGCGTAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATAc < 2:5857877/140‑1 (MQ=255) cAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATAc < 2:4850685/140‑1 (MQ=255) cAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATAc < 2:4580270/140‑1 (MQ=255) cAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATAc < 1:6373947/140‑1 (MQ=255) cAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATAc < 1:6823503/140‑1 (MQ=255) cAGAGGGATGCGGTAGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATAc < 2:883799/140‑1 (MQ=255) agGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGt < 2:6528329/140‑1 (MQ=255) ggATGCGGTCTTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTAc < 2:2494075/140‑1 (MQ=255) ggATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTAc < 2:1972602/140‑1 (MQ=255) ggATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTAc < 1:5672302/140‑1 (MQ=255) ggATGCGGTCGTGTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACACCGCCATACAGTAc < 2:6653373/140‑1 (MQ=255) ggATGCGGTAGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTAc < 2:421247/140‑1 (MQ=255) aTGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTACCt < 1:5291369/140‑1 (MQ=255) tGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTACCTc < 1:6674501/140‑1 (MQ=255) cGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTACCTCAt < 2:2714356/140‑1 (MQ=255) | TATTCTTTTTGATGCAGGATATGATCCATATCTTCCGGGAAAAGAGATACATAGTTTTGCGTTCTGATCCGTTTACAGGCGATAGCGATATGGATGATGAGGTTATTCAGTCCCAAGTTGGACAGAGGGATGCGGTCGTTTTTCATTTTTTTCAGGATGGCGGAACGGATGATCTCGATTTCTTCATTTGGCAAAATATCAGCCTTTTCATTCAGAACATCAATCTCCGTTTCTCTTTCATCGACAATGTACTCCGCCATACAGTACCTCATCTG > NZ_CP034943/3790625‑3790899 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |