| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 316,300 | G→C | 9.0% | L40L (CTG→CTC) | opuAA → | glycine/proline betaine ABC transporter ATP‑binding protein OpuAA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 316,300 | 0 | G | C | 9.0% | 1486.6 / 20.1 | 637 | L40L (CTG→CTC) | opuAA | glycine/proline betaine ABC transporter ATP‑binding protein OpuAA |
| Reads supporting (aligned to +/- strand): ref base G (331/207); new base C (3/67); total (335/302) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.50e-22 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 637 total aligned reads displayed.
TTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCGGTAAATCAACTTTAGTACGGCTGTTAAACCGGCTTATTGAACCGAC > NZ_CP034943/316162‑316437 | tttAATATGGAGGGAAAATATTAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACACAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGa > 1:4988556/1‑140 (MQ=255)tttAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGa > 1:5492511/1‑140 (MQ=255)tttAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGa > 2:7713037/1‑140 (MQ=255)tttAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGa > 1:7083986/1‑140 (MQ=255) tGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGAc < 2:3730337/140‑1 (MQ=255) agtgAAAATATGAGTTTAGATGAGAAACCAATTAAGATACAAGTCGAGAAAGTATCTAAAATTTTTGCTAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACCGAAAGAAACAAAAAGAGATCCTGAAAGAGACCgc > 1:6401146/4‑139 (MQ=255) aGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCgg > 1:3689953/1‑140 (MQ=255) aGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCgg > 1:3101569/1‑140 (MQ=255) aGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCgg > 1:2477572/1‑140 (MQ=255) aGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCgg > 2:4010973/1‑140 (MQ=255) aGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCgg > 1:234399/1‑140 (MQ=255) aGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCgg > 1:2182561/1‑140 (MQ=255) aGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCgg > 1:1005972/1‑140 (MQ=255) aGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCgg > 1:5733847/1‑140 (MQ=255) aGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCgg > 1:5663037/1‑140 (MQ=255) aGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTAAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCgg > 1:6981794/1‑140 (MQ=255) aGGGAAAATATGAGTGTAGATGACAAACCAATAAAGATAAAAGTAGAGAAAGTATCTAACATTTTTGGGAAA‑CAATCAAAGTACGCAGTTCCAATGCTTGCGCAGGGAAGGGCAAAATAAGGGGTCCTGCAAGCGAGCgg > 2:4398642/1‑140 (MQ=255) aGGGAAAATATGAGGGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCgg > 1:3274446/1‑140 (MQ=255) tGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGtt > 2:567215/1‑140 (MQ=255) aGTTTAGATCAGAAACCAATAAAGATAAAAGTATAGAAAGTATCTAAAATTGTTTGGAAA‑CTAACAAAGAAAGCAGTTCAATTGCGAGGGAACGGAAAGAGAAAAAAGGAGTTCGTGAAATCGGCCCGATCTACCGTggg > 2:5422828/1‑140 (MQ=255) tgtAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTgggg > 2:6455665/1‑140 (MQ=255) tgtAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTgggg > 2:2380693/1‑140 (MQ=255) tgtAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGAC‑AAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGt > 1:1185859/1‑140 (MQ=255) gtAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGGTGGGGt > 2:4248628/1‑140 (MQ=255) tAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTa > 2:629509/1‑140 (MQ=255) aTGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAAt > 1:693555/1‑140 (MQ=255) aTGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAAt > 1:4911833/1‑140 (MQ=255) agaAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGCTAAATCaa > 2:205612/1‑140 (MQ=255) aaaCCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGAc > 1:4399811/1‑113 (MQ=255) aaaCCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGc > 1:5344718/1‑140 (MQ=255) aaaCCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGc > 1:6086913/1‑140 (MQ=255) aaaCCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGc > 2:7258408/1‑140 (MQ=255) aaaCCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGc > 1:4040458/1‑140 (MQ=255) aaaCCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGc > 1:1675328/1‑140 (MQ=255) aaaCAAATTAATATAAAAGTCGATAAATTATCTAAAATTTTTGGGAAA‑AAAACAAATAAAGCATTTCAATGGCTTGCCAACGCAAACACAAAAAAAGACAGCGTGAACGCGACCGGATCAACCGTTGGGGTAAATCAAGc < 2:3071648/140‑1 (MQ=255) aCCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAg > 1:5174380/1‑140 (MQ=255) aCCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAg > 2:344568/1‑140 (MQ=255) aCCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAg > 2:6998710/1‑140 (MQ=255) aCCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTGGGGGTAAATCAAGCAg > 1:4544073/1‑140 (MQ=255) aaTTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGGTTGCCAACGGACAGACACAAAAAGAGTTCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGAtt > 1:2874583/1‑140 (MQ=255) aaTTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGAtt < 2:4490794/140‑1 (MQ=255) aaTTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGAtt > 2:4336565/1‑140 (MQ=255) aaTTAACATAAATGTCTAGAAATTATCTAAATTTTTTGGCAAA‑CAAACAAAGAACGCATTTCAAAGCCTTGCCAACGGAAAGAAAAAAAAATAGACCCTCAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGAtt < 2:2924845/140‑1 (MQ=255) tAATATAAAAGTCGACAAAGTATATAAAATTTTTGGGAAA‑AAAACAAACAAACCAGTTCAAATGCTTCCCAACGCAAACAAAAAAAAAGAGAACCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTg < 1:7291928/140‑1 (MQ=255) tAATATAAAAGTCGACAAAGTAAATAAATTTTTTGGGAAA‑CAAACAAAGAACGCAGTTCAAAGGCTTGCCACCGCAAACACAAAAAAACAGATCCTCAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTg < 1:2393154/140‑1 (MQ=255) tAAGATAAAAGTCGAGAAATTATCAAAAATTTTTGGCAAA‑CAAACAAAGAACGCAGTTCAAATGCTTGCCAACGCAAACACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTg < 1:7449708/140‑1 (MQ=255) tAAGATAAAAGACCAGACAGTATCAAAAATTTTGGGGAAA‑CAAACAAAGAAAGCAGTTCAACTGCTTGCCACCGGAAAGACAAAAAAAGAGAACCGGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTg < 2:314900/140‑1 (MQ=255) ataTAAACGTCGACAAAGTATCTAAAATTTTTGCCAAA‑AAAACAAACAAACCCGTACAAATGCTTCCCAACGCAAACACAAAAAAAGAGAGCCTCAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGAt < 1:2704305/138‑1 (MQ=255) acaTAAAAGTCTATAAAGTATCTAAATTTTTTGGGAAA‑CAAACAAAGAAAGCAGTTAAAATGCTTGCCAACGCAAAGACAAAAAAAGAGATCCTGAACGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGAt < 2:3536103/138‑1 (MQ=255) aGATAAACTTCGAGAATCTATATAAAATTTTTGGGCAA‑CAAACAAAGAAAGCCGTGCAACTGCTTGCCAACGGAAAGACAAAAAAAGACAGCCGGAACGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGAt < 2:1991247/140‑1 (MQ=255) aTAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGt > 1:2552355/1‑140 (MQ=255) aaaaGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGtat > 2:277369/1‑140 (MQ=255) aaaGTCGAGAAAGTATCTAAAATTTTGGGCAAA‑CAAACAAAGAAAGCATTTCAAATGCTTCCCAACGCAAAGAAAAAAAAAGAGAGCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGtata < 2:4630146/140‑1 (MQ=255) aaGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTatat > 1:3424440/1‑140 (MQ=255) tataacgTATATAAAATTTTTGGCAAA‑CAAACAAAGAAAGAAGTTCAAATGCTTGCAAACGCAAAGAAAAAAAAAGACATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATgg < 1:6663044/134‑1 (MQ=255) gataatttatataAATTTTTTGGGAAA‑CAAACAAACAAAGCTGTTCAAATGCTTGCCAACGCAAAGAAAAAAAAAGAGATCCTCAACGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATgg < 1:1850195/133‑1 (MQ=255) gataaaGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCATTTAAAATGCTTGCAAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATgg < 2:4974534/137‑1 (MQ=255) tgaACGTATATAAATTTTTTGGTAAA‑CAAAATAAGAAAGCAGTTCAAATGCTTGCCAACGGAACGACAAAAAAAGACATCCTGAACGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGt < 2:1760434/139‑1 (MQ=255) agaAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCTGTTCAAATGCTTGCCAACGCAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGt < 2:1204202/140‑1 (MQ=255) agaAAGTATATAAAATTTTTGGCAAA‑AAAACAAAGAAAGCAGTTCAATTGCTTGCCAACGGAAACAAAAAAAAAGAGATCCTTAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGt < 2:2639787/140‑1 (MQ=255) caacttATCTAAATTTTTTGGCAAA‑AAAACAAAGAAACCATTTAAAATGGTTGCCACCGCAAAAAAAAAAAAAGAGAGCCTCAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTg < 1:875931/135‑1 (MQ=255) ctaaTCTAAATTTTTTGGCAAA‑CAAAAAAATTTAGAATTTCAAAGGATTGCCAACGTAAACAAAAAAAAAGAGTTCATGAAAGCGACCGGATCAACCTTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTgaga < 2:2474700/137‑1 (MQ=255) ctCTAAATTTTTTGGGAAA‑CAAAAAACGAACGCAGTTCAAAGGGTTGCCACCGGATAAAAAAAAAAACACATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAAACAAGCAGATTTTGATGTATATGATGGTGAGatat < 1:3531997/139‑1 (MQ=255) cTAAAATTTTTGGTAAA‑AAAACAAAGAAACCATTAAAAATCCTTGCCAACGCAAAGAAAAAAAAACAGATCCTGACAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATAttt < 1:1490190/140‑1 (MQ=255) aaaaTTTTTGTTAAA‑CAAACAAAGAAAGCAGTTAAAATGGTTGCCAACGGAAACACAAAAAAAGACATCCTTAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGt < 2:4811726/140‑1 (MQ=255) tttGGGAAA‑AAAAAAAAGAAAGCAGTTCAACTGCTTGCCACCGCAAAGAAAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTcatcat < 1:7624114/140‑1 (MQ=255) tttGGCAAA‑CAAACAAACAAACCCGTTCAAAGGCTTCCCAACGCAAACACAAAAAAAGAGAGCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTcatcat < 1:6142198/140‑1 (MQ=255) tttGGCAAA‑AAAACAAAGAAAGCAGTTCAAATGCTTGCAAACGGAAACAAAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTcatcat < 2:3898611/140‑1 (MQ=255) ttgggcaaa‑aaaacAAATAACGCAGTCAAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCGGAACGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTcatcat < 2:5110503/134‑1 (MQ=255) ttgggcaaa‑aaaacAAAGAAAGCAGTTAAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAACGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTcatcat < 2:1005972/134‑1 (MQ=255) ttGGGCAACCAAAAAACGAACGCAGTCCAAATGCTGGCCAACGGAAAGAAAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTcatcat < 2:5240943/140‑1 (MQ=255) gggtaaa‑aaaacAAAGAAAGCATTTAAAATGCTTCCCAACGCAAACACAAAAAAACACATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATgg < 1:3844303/136‑1 (MQ=255) ggAAA‑CAAACAAAGAAAGCAGTTCAACTGCTTGCCAACGGAAACACAAAAAACGAGAGCCTGAAAGCGACCGGATCAACCGTTGGGGTAACTCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGt < 2:2555625/140‑1 (MQ=255) gcaaa‑ctaacAATGAAAGCACTCCAAAGGCTTGCCAACTGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCATGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGt < 1:7367217/138‑1 (MQ=255) gcacaaaaacacaCACAGCAGTGCAAATCCTTGCCAACGCAAAGACAAAAAAAGAGCGCCGGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGt < 2:137142/134‑1 (MQ=255) caaaGAACGCCGTACAAATGGTTCCCACGGTAAAGAAAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAggg < 1:421683/140‑1 (MQ=255) agaaagCATTTCAAATGCTTGCCAACGCAAATAAAAAAAAACAGAGCCTCAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGc < 1:5826516/140‑1 (MQ=255) caatgatgTTCAAATGCTTGCAAACGTAAACAAAAAAAAAGAGATCATTAACGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCg < 1:3336302/133‑1 (MQ=255) agCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTGGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCGGTa > 1:7215691/1‑140 (MQ=255) gCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCGGTaa < 2:3330801/140‑1 (MQ=255) actgcAAATGCTTGCCACCGGAAAGACAACAAAAGAGATCCTGAACGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCGGTAAAt < 2:6934002/136‑1 (MQ=255) ttCAAATGCTTGCCAACGGACAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTGGGGGTAAATCAAGCAGTTTTTGATGTCTATGATGGTGAGATATTTGTCAGCATGGGTCTATCAGGGAGCGGTAAATCa > 2:4132150/1‑140 (MQ=255) tCAAATGCTTGCCAACGAAAAGAAAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCGGTAAATCaa < 2:575593/140‑1 (MQ=255) cAATTGCTTCCAAACGTAATGAAAAAAAAAGTGTTCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCGGTAAATCAAc < 2:613370/140‑1 (MQ=255) cAAATGCTTGCCAACGCAAAGACAAAAAAAGAGATCCTCAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCGGTAAATCAAc < 1:1981534/140‑1 (MQ=255) cAAATGATTCCCAACGTAAACACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCGGTAAATCAAc < 2:6620888/140‑1 (MQ=255) ttGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGAt < 2:1458393/77‑1 (MQ=255) tGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCTGGGGTGTATAAGGGAGCGGTAAATCAACTTTAGTAc > 2:7755768/1‑140 (MQ=255) tGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATTGGTCTATCAGGGAGCGGTAAATCAACTTTAGTAc > 2:6345041/1‑140 (MQ=255) tGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCGGTAAATCAACTTTAGTAc > 1:4684530/1‑140 (MQ=255) tGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGAGTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGTGAGCGGTAAATCAACTTTAGTAc > 1:130778/1‑140 (MQ=255) aaGAAAAAAAACGAGATCCGCAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCGGTAAATCAACTTTAGTACGGCTGTTaaa < 2:6760179/140‑1 (MQ=255) aGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATTATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCGGTAAATCAACTTTAGTACGGCTGTTAAAc < 2:7144798/140‑1 (MQ=255) aGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCGGTAAATCAACTTTAGTACGGCTGTTAAAc > 2:554918/1‑140 (MQ=255) aCAAAAAAAGAGATCCTGAACGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCGGTAAATCAACTTTAGTACGGCTGTTAAACCg < 1:6338697/140‑1 (MQ=255) aaaaaGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCGGTAAATCAACTTTAGTACGGCTGTTAAACCGGCtt > 2:5927974/1‑140 (MQ=255) aaaaaGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCGGTAAATCAACTTTAGTACGGCTGTTAAACCGGCtt > 2:7501154/1‑140 (MQ=255) aTCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCGGTAAATCAACTTTAGTACGGCTGTTAAACCGGCTTATTGAAcc > 2:4684251/1‑140 (MQ=255) aTCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCGGTAAATCAACTTTAGTACGGCTGTTAAACCGGCTTATTGAAcc < 2:2254466/140‑1 (MQ=255) cTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCGGTAAATCAACTTTAGTACGGCTGTTAAACCGGCTTATTGAACCGAc < 2:1150657/140‑1 (MQ=255) | TTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAA‑CAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCGGTAAATCAACTTTAGTACGGCTGTTAAACCGGCTTATTGAACCGAC > NZ_CP034943/316162‑316437 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |