BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NZ_CP034943	607,682	G→C	6.7%	A175A (GCG→GCC)	EO946_RS03185 →	collagen‑like protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP034943	607,682	0	G	C	6.7%	730.6 / 37.1	289	A175A (GCG→GCC)	EO946_RS03185	collagen‑like protein
Reads supporting (aligned to +/- strand): ref base G (150/112); new base C (11/10); total (163/126)
Fisher's exact test for biased strand distribution p-value = 6.56e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 293 total aligned reads displayed.

GAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAG  >  NZ_CP034943/607545‑607818

   cccGGCCCCGCCGGGCCCCCGGGCGCCCCCGGCCCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAgg                                                                                                                                     <  2:2781560/139‑1 (MQ=11)

     cGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGATGCCGGACCAAGCGGAGCGACAGGAg                                                                                                                                   >  2:6331283/1‑140 (MQ=255)

        aCCCGCCGGCGCCACCGGCGCCACTGGGGCGACTGGTGCAGCGGGACCTGCCGGAGCGTCCGGAGCTACCGGTGCAGCCGGACCCGCCGGAGCGACAGGTGCTCCCGGGCAAGCCGGACCAACCGGAGCGACAGGAGCTa                                                                                                                                <  2:4350746/140‑1 (MQ=9)

            gCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCgg                                                                                                                            >  1:4472224/1‑140 (MQ=255)

             ccGGGGCCACGGGAGCCACAGGGGCTACTGGGGACGCCGGACCAGCCGGAGCGACAGGCGCTACCGGGGAAGCCTGACCCGCCCGACCGACCGGAGCTACCGGGGCAGCCGGACCGACCGGAGCGCCAGGAGCGCCCggg                                                                                                                           >  1:7518036/1‑140 (MQ=17)

             ccGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCggg                                                                                                                           <  1:6694291/140‑1 (MQ=255)

                      cGGGAGCCACAGGGGCTAGTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCCGGCGGAGCGACAGGAGCTACCGGGGAAGCCggc                                                                                                                  >  1:801250/1‑139 (MQ=255)

                       gggAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                                                                                                 >  1:5312208/1‑140 (MQ=255)

                       gggAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                                                                                                 >  1:3922394/1‑140 (MQ=255)

                           gCCACCGGCGCTACTGGTGAAGCCGGACCATCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCATCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGc                                                                                                             <  2:4146606/140‑1 (MQ=14)

                           gCCACAGGGGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAACGGAGCGACCGGAGCAACCGGGGGAGCAGGACCAGc                                                                                                             >  1:3367334/1‑140 (MQ=14)

                            ccACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCCACCGGGGCCGCCGGACCACCCGGAGCGACGGGATCGCCAGGGGGAGCGGGAGCTGcc                                                                                                            >  1:2317326/1‑140 (MQ=11)

                             cacaGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACGCGGAGCGACCGGAGCAACCGGGGAGGCGGGAGCAGACg                                                                                                           >  2:1751019/1‑140 (MQ=14)

                               caGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGa                                                                                                         >  2:3476655/1‑140 (MQ=255)

                                   ggCTCCCGGGGAAGCCGGACCAGCCGGCGCGTCAGGTTCTAGCGGGGTCGCCGGTCGAGCCGGTGCGACCGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGa                                                                                                     <  1:7192493/140‑1 (MQ=11)

                                   ggCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGa                                                                                                     <  1:2684293/140‑1 (MQ=40)

                                    gCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGAc                                                                                                    <  1:3841069/140‑1 (MQ=40)

                                    gCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGAc                                                                                                    <  2:6972329/140‑1 (MQ=40)

                                     cTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACa                                                                                                   >  2:4855992/1‑140 (MQ=40)

                                     cTACTGGGGAAGCCGGACCAGCAGGAGCGACAGGAGCTACCTGGGAAGCAGGACCAGCCGGAGAGACAGGAGATAAAGGGGAAGACCGACAAACCGGAGCGCCAGGAGCTACCGGAGAATCCGGACACGCCGCAGCGAcc                                                                                                   >  1:4061822/1‑139 (MQ=21)

                                       aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                                 >  2:6113563/1‑140 (MQ=255)

                                             gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTAc                                                                                           >  2:5260997/1‑140 (MQ=255)

                                              aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGcc                                                                                                            <  2:5467149/122‑1 (MQ=38)

                                              aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGcc                                                                                                            <  2:7402765/122‑1 (MQ=38)

                                              aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAACCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTAcc                                                                                          >  2:1113615/1‑140 (MQ=255)

                                              aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGACGGAGCGACAGGAGCGACAGGGGAAGCCGGAGAAGACGGAGCGTCCGGAGCTACCGGGGCATCCGGCGCAGCCGGAGCGACCGGAGcgccg                                                                                          >  2:922210/1‑136 (MQ=11)

                                              aaGCCGGACCAACCGGAGCGACAGGAGCTACCCGGGAATCCGGACCAGCCGGAGCCACAGGAGCTACCGGGGAAGCCCGCCCAACCGGAGCGACCGGAGCAACCGGGGAAGCCGGAGCTGCCGGAGCGCCAGGAGCTccc                                                                                          >  2:2073871/1‑140 (MQ=14)

                                                gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAg                                                                                                                       >  2:6723553/1‑109 (MQ=35)

                                                gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGCAGCCGGACCAACCGGACCGACCGGAGCGACAGGGGATACCGGCCCAGCCGGAGCAACCGGAGCGACCgg                                                                                        >  2:21023/1‑140 (MQ=14)

                                                 cgggACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCggg                                                                                       <  1:1444590/138‑1 (MQ=255)

                                                 ccGGACCCGCCGGAGCGACCGGAGCTACGGGGGAAGCCGGACCCTCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCggg                                                                                       <  2:1157353/140‑1 (MQ=14)

                                                   ggACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGAc                                                                                                    <  1:942695/125‑1 (MQ=38)

                                                   ggACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGAc                                                                                                    >  2:942695/1‑125 (MQ=38)

                                                     aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                                   <  1:441687/140‑1 (MQ=255)

                                                     aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCGACCGGCGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                                   >  2:3877583/1‑140 (MQ=255)

                                                     aCCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGCTCGACAGGAGCTAGCGGGGATGCCGGACGTTGCGGTGAGAGTGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                                   <  1:4580674/140‑1 (MQ=14)

                                                         gCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                                                                                                          <  1:6732857/113‑1 (MQ=39)

                                                         gCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCgg                                                                               >  2:684514/1‑140 (MQ=255)

                                                              aGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCaa                                                                          >  1:6603823/1‑140 (MQ=255)

                                                                   cAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAACCGGa                                                                     >  2:3220454/1‑140 (MQ=255)

                                                                   cAGGAGCAACCGGTGCAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCGGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGa                                                                     <  2:7667678/140‑1 (MQ=14)

                                                                           aCCGGGGACGCCGTCCCAGCCGGAGCTACAGGCGCTACCGGTGAAGCCGGACCAACGGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACggg                                                             <  2:2293391/140‑1 (MQ=14)

                                                                           aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCgg                                                                                                                            >  2:145833/1‑77 (MQ=39)

                                                                                 gcatccGGACCAGCCGGAGATACTGGAGCCACCGGCGCACCCGGAGCAACCGGAGCTCCAGGAGCACCCGGCGCAGCCGGACCCACCGGAGCGACTGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                                       <  1:2023337/136‑1 (MQ=2)

                                                                                 gcaGCCGGACCCGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                                       <  1:3647261/138‑1 (MQ=255)

                                                                                 gacgCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                                       <  2:4494857/137‑1 (MQ=255)

                                                                                 gAAGCCGGACCAGCCGGAGCGACAGGCTCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                                       <  2:3922394/140‑1 (MQ=255)

                                                                                 gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAg                                                                                                        >  2:4092974/1‑91 (MQ=37)

                                                                                 gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                                       <  1:7415905/140‑1 (MQ=255)

                                                                                 gAACCCGGACCACCCGGAGCAACAGGACCTCCCGGGGCCGCCGGACCAACCGGAGCGACAGGAGCTCCCGGCGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                                       <  1:1345719/140‑1 (MQ=14)

                                                                                 ccccccGGACCCTCCGCCGCGACAGCCGCTACCGCGGCAGCCGGACCCACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                                       <  2:6738991/136‑1 (MQ=14)

                                                                                 caacccGGACCCCCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCCACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                                       <  2:4804837/136‑1 (MQ=255)

                                                                                    gCCGGACGATCGGGAGCGACAGGTGCTACGGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgg                                                    <  2:7150866/140‑1 (MQ=14)

                                                                                    gCCGGACCAGCCGGATCGACAGGAGCTACGGGGGTAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCGGTACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgg                                                    <  2:4396584/140‑1 (MQ=14)

                                                                                    gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCg                                                                                                                             >  2:305948/1‑67 (MQ=35)

                                                                                    gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACCg                                                                                                                             >  2:1188563/1‑67 (MQ=14)

                                                                                    cccGGAGCACCCGGCGCCCCCGGACCTACCGGCGCAACCGGAGCCACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgg                                                    <  1:5171744/139‑1 (MQ=14)

                                                                                    cccGGACCTCCCGGAGCCACCGGAGCTACCGGCGAAGCCGGACCATCCGGAGCTACCGGAGCTACCGGGGAAGCCGGACCAGCAGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAACCGCAGCGACGGGAGCCACCgg                                                    <  2:5355146/139‑1 (MQ=11)

                                                                                       ggACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGc                                                 <  1:2759902/140‑1 (MQ=255)

                                                                                         cccAGCCTGCGCGACCGCAGCGACCGGGGAAGCCGGACCAACCGGCGCGCCAGGAGCGACCGGGGAAGCCGCACCAGCCGGAGCCACCGGAGCTCCCGGGGAAGCCGGACCAACCGGAGCGACTGGAGCCACAGGGGCTa                                               <  1:1643342/139‑1 (MQ=14)

                                                                                         aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGc                                                                                                                      <  1:5820955/69‑1 (MQ=35)

                                                                                         aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGc                                                                                                                      >  2:6382787/1‑69 (MQ=35)

                                                                                         aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTa                                               >  2:5196651/1‑140 (MQ=255)

                                                                                         aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACAAGCCGGAGCGCCAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCGACCGGGGcga                                               >  2:4423127/1‑138 (MQ=11)

                                                                                              cggcaGCGACAGGAGCTACCGGGGAAGCCGGACCCACCGGAGCGACAGGTGCTACCGGGGAAGCCGGACCATCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTggg                                          <  2:5771556/136‑1 (MQ=255)

                                                                                              caggAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                                       <  1:6127079/125‑1 (MQ=255)

                                                                                                  cgcgcccggAGCTACCGGCGATTCCGGAGCCACCGGAGCCACTGGAGCTCCGGGGGACCCCGGACCCGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACg                                      <  1:2537822/133‑1 (MQ=17)

                                                                                                        aGGCGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGAc                                <  2:6680854/140‑1 (MQ=255)

                                                                                                             cTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGcc                           <  1:684514/140‑1 (MQ=255)

                                                                                                               cccGGGGAAGCCGGACCTACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACTGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCgg                         <  2:1286250/139‑1 (MQ=255)

                                                                                                               aCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGACGCCGGCCCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGCCCAACCGCAGCGACGGGAGCGACAGGGGCTACAGGGGACGGCGGACCAGCCgg                         >  2:5131697/1‑140 (MQ=17)

                                                                                                               aCCGGCGAAGCCGGACCAACCGGAGCCACAGGAGCTACCGGGGACGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGATACTGGGGACGTCGGACCAGCCgg                         <  1:1840115/140‑1 (MQ=18)

                                                                                                                 gggggctgCCGGAGCATCCGGTGAGACAGGAGCGCCCGGCGATTCGGGAGCCCCGGGAGCGACCGGCGCTCCCGGCCAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAg                       <  1:5627708/133‑1 (MQ=9)

                                                                                                                  ggggAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGGCGGACCAGCCGGAGc                      >  1:4921171/1‑140 (MQ=255)

                                                                                                                    ccaccccGGACCGACGGGAGCCACAGGGGCTACTGGGGACGGCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGa                    <  1:1024975/135‑1 (MQ=17)

                                                                                                                    accaaccGGAGCGACGGGAGCCACAGGCGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGa                    <  1:4254078/135‑1 (MQ=14)

                                                                                                                     gAAGCCGGACCAACCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGAc                   <  1:1235228/140‑1 (MQ=255)

                                                                                                                     gAAGCCGGACCAACCGGAGCGACAGGAGCCACCGGGGAAGCCGGACCAGGCGGAGCGCCAGGAGCGACCGGCGAAGCCGGACCACCCGGAGCGACGGGCGCGACAGGAGCACCGGGCGCCGGCGGACCAGCCGCAGCggc                   >  2:371827/1‑138 (MQ=14)

                                                                                                                     gAAGCCGGACCAACCGGAGCGACAGGAGCAACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTAAAGCCGAAGAATGACCAAGCGGAGCTACGGGAGCCACAGGCGCTACTGTGGACGTCTGACCACCCGGACCGAc                   >  1:5944819/1‑140 (MQ=17)

                                                                                                                      aaGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACggg                                                             >  2:6625711/1‑97 (MQ=37)

                                                                                                                       aaccGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAg                 >  2:2718191/3‑140 (MQ=14)

                                                                                                                       aaccGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAg                 >  2:7284153/3‑140 (MQ=14)

                                                                                                                        gCCGGACCAACCGGAGCGACAGGAGCTTCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAgg                <  1:5458349/140‑1 (MQ=255)

                                                                                                                        gCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTCCCGGGGACGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAgg                >  2:3635558/1‑140 (MQ=255)

                                                                                                                        gCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAgg                >  1:7022677/1‑140 (MQ=255)

                                                                                                                        gCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACAAACCGGAGCGACGGGAGCGACAGGGGCAACGGGGGACGTCGGACCAGCCGGAGCCACAgc                >  2:5954636/1‑139 (MQ=18)

                                                                                                                        gCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAgg                >  1:3343241/1‑140 (MQ=255)

                                                                                                                        gCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAgg                >  1:1494821/1‑140 (MQ=255)

                                                                                                                            gACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCt            <  1:5260997/140‑1 (MQ=255)

                                                                                                                             agcgacgggAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTa           >  2:2463067/8‑140 (MQ=17)

                                                                                                                             aCCAACCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAGCCGCAGCGAGCGGAGCTCCCGCCGACTCCGGACCAACCGGAGCGCGGGGAGCCACCGGCGCGACTGGGGACCTCGGACCGGCCGGAGCGCCCGGAGCtc           >  2:1974320/1‑139 (MQ=12)

                                                                                                                             aCCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                                                                  >  1:302449/1‑37 (MQ=40)

                                                                                                                             aCCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTa           >  2:1413417/1‑140 (MQ=255)

                                                                                                                             aCCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTa           >  2:745015/1‑140 (MQ=255)

                                                                                                                             aCCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCTGCCGGAGCGACAGGAGCTa           >  2:1545113/1‑140 (MQ=255)

                                                                                                                                 aCCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCgg       <  1:3497263/140‑1 (MQ=255)

                                                                                                                                  cgggAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCggg      >  2:168127/3‑140 (MQ=18)

                                                                                                                                  cgggAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGCACGTCGGACCAGCCGGAGCGCCAGCAGCTACCggg      >  2:5409288/3‑140 (MQ=17)

                                                                                                                                      cgcgcCAGGCGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGACGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg  <  1:2101350/139‑1 (MQ=255)

                                                                                                                                      aGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg  <  1:975370/140‑1 (MQ=255)

GAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAG  >  NZ_CP034943/607545‑607818

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`