| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 755,531 | A→C | 14.2% | Q22H (CAA→CAC) | EO946_RS03880 → | rhamnogalacturonan acetylesterase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 755,531 | 0 | A | C | 14.2% | 708.7 / 28.0 | 346 | Q22H (CAA→CAC) | EO946_RS03880 | rhamnogalacturonan acetylesterase |
| Reads supporting (aligned to +/- strand): ref base A (203/73); new base C (2/63); total (206/140) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.15e-27 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 350 total aligned reads displayed.
CACCGGTTTTTTCAAGGGAAGAGCTGTCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTGAGCCGGATG > NZ_CP034943/755392‑755670 | cACCGGTTTTTTCAAGGGAAGAGCTGTCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGCATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCaa > 2:4745048/1‑140 (MQ=255) ccGGTTTTTTCAAGGGAATAGCTGTCCATTATTGATGCCATATGAAAAGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAgg < 2:6555312/140‑1 (MQ=255) ccGGTTTTTTCAAGGGAAGAGCTGTCCATGATTGATGCCATATGAAACGAATAAAACGAGGGTGAATGAGATATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAgg < 2:2236378/140‑1 (MQ=255) caagttaaGAGCTGTCAATGATTTATTCCATATGAAACTCAAATAACGAGGTGGAATGAGACATGTGAAATCACATTTATCTTTCTGGAGATTCAAATTTTCAAACTTATTGAGACAGCAAAAATCAAGGGGGGTggggg < 2:3064534/134‑1 (MQ=255) tCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTc > 1:1117577/1‑140 (MQ=255) tCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTc > 1:1338422/1‑140 (MQ=255) tCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTc > 1:2557171/1‑140 (MQ=255) tCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTc > 2:1481372/1‑140 (MQ=255) cATGATTGATGCACTATGAAACGAACAAAACTAGCGGGAATTAGAAATGGCAAATCACATTTATATTGCTGTCGTTTCAACTGTTAAAACGTATGGAGACACCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGc < 2:3406011/140‑1 (MQ=255) cATGATTGATGCAATATGAAACGAAAAAAAAGATGGGGAATGAGAAATCGCAAATCACATTTATATTTCTGGAGATTCAACTGTTAAAACGTATGGAGACAGCACAAATCAAGGCGGGTGGGGGCAGATTCTCGGCTCGc > 2:7470256/1‑140 (MQ=255) aTGATCGATGCCATATGAAACGAACACAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCTACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCa < 2:1434191/140‑1 (MQ=255) gattgatGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATc > 2:2494463/1‑140 (MQ=255) gattgatGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATc > 1:3675616/1‑140 (MQ=255) gattgatGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATc > 2:5382001/1‑140 (MQ=255) tgaacccATAACAAACGAAAAAAACGAGGCCGAATGACAAATCGCAAATCACATTTATCTTGCTGGCGATTCACCTGTTCAAACGTATGGAGACAGCACAAATCCCGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGc < 2:322931/135‑1 (MQ=255) gatGCCATATGAAACGAAAAAAACGAGGGGGAATGACAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTAGGGAGACACCACAACCCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGcc < 1:6826198/140‑1 (MQ=255) caccccATACGACACCACAAAAACGAGGCGGAATGAGAAATGGCAAAACACATTGATCGTGCTGGCGATTCACCTCCCCACACCCCGGGAGCCAGCACCACTCCACCGGCGCGGGGGCAGTTTCTCGGCTCGCATCTGcc < 2:3675616/136‑1 (MQ=255) atGCCATATGAAACGAAACAAACGAGGGGGACTGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAATCGTATGGAGACATCACAAATCACGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 2:2386464/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGTGGGGGACGGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGAACGCACAAAGCAAGGGGGGTGGGGGCAGTGTCTCGGCTCGCATCTGCCg > 1:5712835/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCACACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 2:7094194/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACACATCACGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:4402415/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:287245/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:1000967/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:938389/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:4678812/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:4028987/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:3054788/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:3183466/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:3273832/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:356957/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:360312/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 2:5074039/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTAAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGcgg > 1:2664278/1‑138 (MQ=255) atGCCATATGAAAATAAAAAAACGAGTGGGAATGATAAATTTCAAATCACATTTATCTTTCTGGCGATTCACCTGTTCAAACGTATGGAGACAGCACAACTCCAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg < 2:4570420/140‑1 (MQ=255) tatGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGTCGATTAAACTGTTCAAACGTATGGAGACAGCACAAATCACGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCat < 2:3197119/140‑1 (MQ=255) tatGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAATGGGGTTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCat > 2:4645972/1‑140 (MQ=255) tatGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCat > 1:7527852/1‑140 (MQ=255) tatGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGATCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCat > 2:2578635/1‑140 (MQ=255) atGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCata > 1:7113057/1‑140 (MQ=255) atGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCata > 1:5012787/1‑140 (MQ=255) tatctaaaaaaaTGAGTTGTAATTAGAATTGTCATTTCATTTTTTTCTTGCTTGCGATTCAACTTTTCAAACGTATTGAGACAGCACACATCAAGGGGGGTGGGCGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTc < 2:3863939/135‑1 (MQ=255) aacataaaataaCGATGGTTAATGATCAATGGCAATTCAACTTTATCTTGCTGTCTATTCAACTGTTCAAACCTATGCAGACCGCACACATCAAGGGGGCGGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTc < 2:3533412/135‑1 (MQ=255) aaaCGAAAAAAACTAGGGGTAATGAGAACTGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACACAACAAGCGGGGTGGCGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTc < 2:1583316/140‑1 (MQ=255) aaaCGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGAGTCAACTGTTCAAACGTATCGACACAGCACAACTCCCGGGGGGGGGGGGCAGTTGCTCGGCTCGCATCTGCCGGAGCATATTc < 1:170905/140‑1 (MQ=255) aaCGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCa > 2:3366542/1‑140 (MQ=255) aaCGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCa > 2:6210691/1‑140 (MQ=255) actacaaaaaCGAGGCTGAATGACACATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAACTCACGGGGCGGGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCaa < 1:2490432/135‑1 (MQ=255) accaaaaaaaCGAGGGCGCATGAGAAATGGCAAATCACATTTATCTTGCGGGCGATTCAACTGTCCCAACGTATGGCGCCAGCACAAATCCCGGGGGGTGGGGGCAGTTTCGCGGCTCGCATCTGCCGGAGCATATTCaa < 1:2241397/137‑1 (MQ=255) aCGAAAAAATCGAGTGTGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCaa < 2:646014/140‑1 (MQ=255) taaataaaCGAGTGTTAATGATAAATTCAAAATCACATTTATCTTGCTGGCGATTCTTCTGTTCAAACTTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGt < 2:801530/139‑1 (MQ=255) aaaacaaCGTGCGCGAATCACACATGCCAAATCTCATTGATATTGCTGGCGAGGCACCTGCTCAACCGTTGGGAGACCGCAGCACTCACGGCGGCGCGGCGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTg < 1:4772723/140‑1 (MQ=255) aaCGAGCGGCAATGAGACATGCCAAATCACATTTATCTTGCTGGCGATACAACTGTTCAAACGTATGGACACAGCACACATCCCGGGGGGGGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTaa < 1:800362/140‑1 (MQ=255) aaCGACCGGCAAAGAGACATGGAAAATCACATTGATCGTGCTGGCGATTCTACTTAGCTCAGGTCTTTACACAGCACAAATCACGGCGGGTGGGGGCAGTTTCGCGGCTCGCATCTGCCGGAGAATATTCAAGTGATTaa < 2:1133999/140‑1 (MQ=255) cGAGCGCGAATCAGAAATCCCAAATCACCTTTATCGAGCTCGCGATTCAACTGTACAACCGTATGGAGACACCACACACCCAGGGGGGCGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACa < 1:4195463/140‑1 (MQ=255) gAGGGGCACTGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACag < 1:2733242/140‑1 (MQ=255) tttgttaTGAGATATGTCTAATCACTTTTATCTTGCTGTCTATTCCACTGTTCCATCGTATGGATACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACagag < 2:418438/134‑1 (MQ=255) aaTGATAAATGCCACCTCACCCTGATCTTGGTGTCTATTGAACTTTTGATCAGTATGGAGACAGCACAAATGAAGGGGGGTGTGTGCATTTTCTCGGATCGCATCTGCCGGAGCATATTCAAGTCATTAACAGAGCAATc < 2:6155436/140‑1 (MQ=255) aaTGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGgaa > 1:3140033/1‑140 (MQ=255) tcAAATGATATTTTTCTTGCTGGGGATTGATCTGTTCCTACGTTTGGAGTCTGCTCATATGCTGTGGGGTGGGGGCATTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGaagaag < 2:6056357/139‑1 (MQ=255) aTTTATCTTGCTGGCGATTCAACTGTTCAACCGTATCGAGACAGCACAACACCCGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAAc < 1:6493239/140‑1 (MQ=255) ttttCTTGCTGTCTATTTAAGTGTTCCTTCGTCTGGAGACTGCACTCAGCCCGGGGGGTGGTGTCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAAGAGAGCAATCGGGGGAAGAAGCTCGAAAACAt < 2:4385696/137‑1 (MQ=255) ttAGCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCGTCTGCCGGAGCTTCTTCAGGTGATGACCCGAGCAATCGGGGGAAGTGGCTCGAAAACag > 1:640184/1‑139 (MQ=255) cTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTtgt > 1:384739/1‑140 (MQ=255) ctgcctcttCACCTGTTCACACTGATGGCCACCGCACACATCACGCGCGGTGCGTGCAGTTTCTCGTCTCGCATCTGCCGGAGCATATTCAAGTTATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGaa < 2:2709592/133‑1 (MQ=255) cTGGCGATTCAACTGTTCACCCGGCTGCAGACAGCAAAAATCTAGGGGGGGTGGGGCAGTTTCTAGGCTGTCATATGCATTAGCATATTCTAGTGTTTAACATAGCAATCGGGGGAAGAAGCTCTAAAACATGTGTTGaa < 2:4348739/140‑1 (MQ=255) cTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGaa > 1:7346702/1‑140 (MQ=255) cTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGaa > 1:6031184/1‑140 (MQ=255) tgccGATTCAACTGTTATACCGTATTGAGCCAGCACCAACCCAGGGGGGGGGGGGCAGTGTCTCGGCTCGCATCTGCCGGAGCATATTCCAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAag < 2:415843/137‑1 (MQ=255) taCTGTTCAAACGTATGGAGACAGCACAAATAAAGGGGGGTGGGGGCAGTTTCTCGGATCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAAACGGGGGAAGAAGCTCGAAAACAGTTGTGGAAGAGGGCAGGc > 2:681850/2‑140 (MQ=255) ttCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAACCAGTTGTGGTAGAGGGCAGGCTTCAg > 2:4872240/1‑140 (MQ=255) ttCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAg > 1:3764080/1‑140 (MQ=255) ttCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAg > 1:3405497/1‑140 (MQ=255) ttCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAg > 1:7446813/1‑140 (MQ=255) ttCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAg > 1:2349144/1‑140 (MQ=255) ttCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTCCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAg > 2:7349588/1‑140 (MQ=255) cAAACGTATGGAGACAGCACAACTCCAGGGGGGTGGGGGCAGGTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGc < 2:2854453/140‑1 (MQ=255) cAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACAGTTGTGGAAGAGGGCAGGCTTCAGGc > 1:396142/1‑140 (MQ=255) atggtctGGAGAGAGCACAAACCCCGGGGGGTGCTGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGa < 2:2301855/134‑1 (MQ=255) tATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGACGAGGGCAGGCTTCAGGCGATTCt > 2:1716618/1‑140 (MQ=255) tATCGAGCCCGCACAAACCCCGGGGGCGCGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGGTTCAGGCGATTCt < 2:6976427/140‑1 (MQ=255) tGGATACAGCACAAATCAAGGGGCGTTGGGGCAGTTTCTCGTCTCGCATCTGCGGGAGCAGATAAAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACTATTGTGGAAGAGGGCAGGGTTACGGCGATTCTTg > 1:5476942/1‑140 (MQ=255) ggcgaCAGCACCACCCGAGCGGGGTCGCGGCAGTGTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTACCAGAGCACTCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGa < 1:70048/137‑1 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGc > 2:245320/1‑46 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 1:5271202/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 2:7648158/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 1:7214210/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 2:3506245/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 2:598444/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGCGCAGGCTTCAGGCGATTCTTGATGTGAt > 2:6627391/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGAATAACAGAGCAATCGGGGGAACAAGCTCGAAAACATTTCTGGACGAGGGCAGGATTCAGGCGATTCTTGATGTGAt > 2:5161629/1‑140 (MQ=255) gCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAtt > 1:1908599/1‑140 (MQ=255) gCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAtt > 1:5854465/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTg > 1:7198528/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTg > 1:6686085/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTg > 2:5239323/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTg > 1:1492675/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACAGTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTg > 2:3014158/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATAATCAAGTGATTAACAGAGCAAAAGGGGGACGAAGCTCGAAATCATTTGTGGAAGAGGGGAGGCTTCTGGCGCTTCTTGAGGTGATTg > 2:5733543/1‑140 (MQ=255) aTCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTGAGCCg > 2:501642/1‑140 (MQ=255) aGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTGAGCCGGATg > 1:4887125/1‑140 (MQ=255) | CACCGGTTTTTTCAAGGGAAGAGCTGTCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTGAGCCGGATG > NZ_CP034943/755392‑755670 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |