| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 986,801 | G→T | 9.3% | D372Y (GAT→TAT) | spoVR → | stage V sporulation protein SpoVR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 986,801 | 0 | G | T | 9.3% | 872.5 / 12.5 | 374 | D372Y (GAT→TAT) | spoVR | stage V sporulation protein SpoVR |
| Reads supporting (aligned to +/- strand): ref base G (146/169); new base T (2/51); total (148/226) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.47e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 378 total aligned reads displayed.
GCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGCTCTATATTAAGCATTGGTA > NZ_CP034943/986664‑986940 | gCGTGAAGCCTGGCTCAGGCCGGGAGAAAATCTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTGATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGAt > 2:1166155/1‑140 (MQ=255)gCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGAt > 2:3256104/1‑140 (MQ=255) tGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAAtcg > 1:7127514/1‑140 (MQ=255) tGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAAtcg > 2:6845164/1‑140 (MQ=255) gCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCATAGATTATAAAAtcgtc > 1:2761663/1‑140 (MQ=255) aggctgtGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGTTATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGAGAGGATGTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACa < 1:4228437/140‑1 (MQ=255) aggcaggGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACa < 1:4935113/140‑1 (MQ=255) aggcaggGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACa < 1:600199/140‑1 (MQ=255) ggcaggGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACaa > 1:2386165/1‑140 (MQ=255) gcaggGAGAACATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACaaa > 1:2910031/1‑140 (MQ=255) gcaggGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACaaa > 1:1722448/1‑140 (MQ=255) gcaggGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACaaa > 1:6074727/1‑140 (MQ=255) gcaggGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACaaa > 1:2812963/1‑140 (MQ=255) gggAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCATTATTTGTTTCAAACACAGGGCAGAGATTATAAAATCGTCGACAAAGaa < 1:2613737/140‑1 (MQ=255) ggAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAAt > 1:1005307/1‑140 (MQ=255) ggAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAAt > 2:5787868/1‑140 (MQ=255) ggAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAAt > 1:861500/1‑140 (MQ=255) ggAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAAt > 1:6912452/1‑140 (MQ=255) aaTGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAATCAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAAt > 1:3725426/1‑140 (MQ=255) aTGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATc < 2:6912463/140‑1 (MQ=255) aTGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATc < 1:1488184/140‑1 (MQ=255) aTGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATc < 1:4710431/140‑1 (MQ=255) ttGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTa > 1:7314659/1‑140 (MQ=255) ttGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTa > 1:6481069/1‑140 (MQ=255) tGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAATCAGGGCAGATATTATAAAATCGTCGACAAAGAATGGAAATCGGTAc > 2:1388338/1‑140 (MQ=255) tGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCTACAAAGAATGGAAATCGGTAc > 2:6631482/1‑140 (MQ=255) ggTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTAcgcg < 1:6995034/140‑1 (MQ=255) ggTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTAcgcg < 2:4903027/140‑1 (MQ=255) tCATGGAAATTGAATCCGATATCACTCTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGAc < 1:1976698/140‑1 (MQ=255) tCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGAc < 2:5469377/140‑1 (MQ=255) tCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGAc < 2:5690391/140‑1 (MQ=255) tCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGAc < 1:5537045/140‑1 (MQ=255) tCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGAc < 1:1769311/140‑1 (MQ=255) tCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGAc < 1:7387028/140‑1 (MQ=255) cAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTCATTTGTTTCAAAAACAGGGCAGAGATGATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGAcc < 1:1911559/140‑1 (MQ=255) aGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCa > 1:5196133/1‑140 (MQ=255) gggAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGa < 2:2083771/118‑1 (MQ=255) gggAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGa > 1:2083771/1‑118 (MQ=255) gggAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAg > 2:7568057/1‑140 (MQ=255) aTTGAATCCGATATCTCTTTCATCCGCAATTATTTAACCAAAGAATTAGTCATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCCGAGATTATAAAATCATCGATAAACAGTGGAAGTCGGTGCGCGACCAGCTCGt < 1:2172693/140‑1 (MQ=255) ttGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTg > 1:6447126/1‑140 (MQ=255) ttGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTg > 2:3072318/1‑140 (MQ=255) ccGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATg < 2:7162814/140‑1 (MQ=255) tttCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATc < 1:5892430/105‑1 (MQ=255) tCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAAcggc > 1:1248536/1‑140 (MQ=255) tCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGc > 2:383784/1‑114 (MQ=255) tCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCggg > 2:6369944/1‑140 (MQ=255) ccGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGt > 1:4842552/1‑140 (MQ=255) aaTTACTTAACACAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTcc < 2:4021018/140‑1 (MQ=255) aaTTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTcc < 2:6501606/140‑1 (MQ=255) aaCAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGa < 2:6138373/140‑1 (MQ=255) cAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACa < 2:1248536/140‑1 (MQ=255) cAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACa < 2:2911199/140‑1 (MQ=255) aaaaaGACTTTGTTATGCGCGAGGATATTTATTTTTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACa < 1:7665831/139‑1 (MQ=255) aGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAacgacg > 2:263989/1‑140 (MQ=255) aGTTAGGCGCGTGTATCTTTATTTGTTAAAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGATTGCAAATCGTTACGCGACCAGCTCGTGAGCTTGGGGTTAAACGGCGGGTTTCCTTATTTGACAGTAAacgacg < 1:5334786/140‑1 (MQ=255) ttATGCGCTCGTATCTTTATTTGTTTCAAAAACAGGGCAGATATTATAAAATGGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCAGGCGGGTAAACGGCGGGTTTCCATATTTGACATTAAACGACGGt < 2:4822094/140‑1 (MQ=255) ttATGCGCTAGTATCTTTATTTTTTTCAAAAACAGGGCAGATATTATAAAATCGTCGAAAAATAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGt < 2:1018853/140‑1 (MQ=255) cgcgAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTa > 1:4618513/1‑140 (MQ=255) cgcgAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTa > 2:3140224/1‑140 (MQ=255) aGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTTACAGTAAACGACGGTGATTACATg > 2:4389204/1‑140 (MQ=255) ggATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGa > 2:423029/1‑140 (MQ=255) ttATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATa > 2:7707736/1‑140 (MQ=255) tttttttTCAAAAACTGGGCAGAGATTATAAAATCGTCGACAAAGAAGGGAAATGGGAACGCGACCAGCTGGTGAGCATGGGGGTAAAGGGGGGGTTTCAATATTTGACAGTACACGACGGTGATTACATGAAAAATAAc < 1:7707736/139‑1 (MQ=255) tttttttTAAAAAACAGGGCACATTTTATAAAATCGTCGAAAAATAATGGAAATCGGTACGCCACCCGCTCGTGAGCATGCGGTTAAACGGCGGGTTTCAATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 1:6333460/139‑1 (MQ=255) tttgttttAAAAAACAGGGAATATATTATAAAATCGTCTAAAAATATGGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCAATATTTGACAGTACACGACGGTGATTACATGAAAAATAAc < 1:3581151/135‑1 (MQ=255) aTTTGTTTCAAAAACTGGGCATCTATTATAAAATCGTCGACAAAGATTGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 2:7450811/140‑1 (MQ=255) aTTTGTTTCAAAAACAGGGCAGCCATTATAAAATCGTCGACAAAGAATGGAAATCGGTCCGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 2:2260544/140‑1 (MQ=255) aTTTGTTTCAAAAACAGGGCAGATATTAAAAAATCGTCGACAAAGAAGGGAAATCGGTACGCGACCAGCTGGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTACACGACGGTGATTACATGAAAAATAAc < 1:5787868/140‑1 (MQ=255) aTTTGTTTAAAAACCAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAAGCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 2:469187/140‑1 (MQ=255) aTTTGTTTAAAAAACAGGGCATAGATTATAAATTCGTCGACAAATAATGCAAATGGGTACGCGACCAGCTCGTGCGCATGCGGTTAACCGGCGTTTTTCCATATTTGACATTAAACGACGGTGTTTACATGAAAAATAAc < 2:1552409/140‑1 (MQ=255) aTTTGTTTAAAAAACAGGGCAGATTTTATAAAATCGTCGAAAAAGAATGGAAATCGTTACGCGACCCGCTCTTGAGCATGCGGGTAAACGGCGGTTTTCAATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 2:6746635/140‑1 (MQ=255) aTTTGTTTAAAAAACAGGGCAGACATTATAAAATCGTCGACAAACAATGGAAATCGGTACGCCACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 2:1797577/140‑1 (MQ=255) aTTTGTTAAAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAATTGGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTTACATTAAACGACGGTGATTACATGAAAAATAAc < 2:6042850/140‑1 (MQ=255) aTTGGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCTACAAAGAATGGAAAGCGGTACGCGACCAGCTCGTGAGCATGGGGGTAACCGGCGGGTTTCCATATTTGACATTAAACGACGGTGATTACATGAAAAATAAc < 2:1684098/140‑1 (MQ=255) tGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCAATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAg < 2:450287/140‑1 (MQ=255) gTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGAc > 1:5050635/1‑61 (MQ=255) gTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGttt > 1:3403805/1‑94 (MQ=255) gTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGttt < 2:3403805/94‑1 (MQ=255) gTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGc > 1:1797577/1‑140 (MQ=255) gTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGc > 2:506550/1‑140 (MQ=255) gTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGc > 2:3491097/1‑140 (MQ=255) gTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGc > 1:3652235/1‑140 (MQ=255) gTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGAATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAAGAGc > 1:4485347/1‑140 (MQ=255) tttCAAAAACAGGGCCGCGATTATAAAATCGTCGACAAAGAATGCAAATCGGTACGCGACCAGCTCGTGCGCATGCGGGTAACCGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAACAATAACGAGct < 2:500969/140‑1 (MQ=255) tttCAAAAACAGGGCAGATATTATAAAATCGTCGACAAAGAATGTAAATCGGTACGCGACCAGCTCGTGAGCATGCGGTTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 2:245251/140‑1 (MQ=255) tttCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGTTACGCGACCAGCTCGTTAGAATGCGGGTAAACGGCGGGTTTCCATATTTGAAAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 2:279650/140‑1 (MQ=255) tttAAAAAACTGGGCATATATTATAAAATCGTCGAAAAAGATTGGAAATCGGTACGCGACCAGCTGGTGAGCATGCGGGTAAACGGCGGGTTTCAATTTTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 1:6639212/140‑1 (MQ=255) tttAAAAAACTGGGCATAGATTATAAAATCGTCGAAAAAGAATGTAAATCGTTACGCGCCCAGCTCGTGAGCATGCGGTTAACCGGCGGGTTTCCATATTTGACATTAAACGACGGTGATTACATGAAAAATAACGAGct < 1:916214/140‑1 (MQ=255) tttAAAAAACAGGGCATATATTATAAACTCGTCCACAAATAATGGAAATCGGTCCGCGACCAGCTCGTTCGCATGCGGTTAAACGGCGGGTTTCAATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 1:6116071/140‑1 (MQ=255) tttAAAAAACAGGGCATATATTATAAAATCGTCGAAAAACAATGTAAATGGGTACGCCACCAGCTCGTGAGCATGCGGTTAAACGGGGGTTTTCCATATTTGACATTAAACGACGGTGATTACATGAAAAATAACGAGct < 1:3809130/140‑1 (MQ=255) ttacAAAAACAGGGCCTACATTATAAAATCGTCCACAAACAATGCAAATCGGTCCGCGACCAGCTCTTGAGCATGCGGGTAAACGCCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 2:7346334/137‑1 (MQ=255) ttacAAAAACAGGGCAGTGATTATAAATTCGTCGACAAACAATGTAAATCGGTACGCGACCCGGTGGTGAGCTTGGGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 1:396890/137‑1 (MQ=255) ttaaaaaaaCAGGGCAGACATTATAAAATCGTCTAAAAACAATGTAAATCGTTACGCGACCAGCTCTTGAGAATGCGGTTAAAGGGCGGGTTTCAATATTTGACTTTAAACGACGGTGATTACATGAAAAATAACGAGct < 1:2264186/136‑1 (MQ=255) tataaaaaaCAGGGCACAGTTAATAACATCGTCTAAAAACATTGGATATCGCTACGCCACAAGCTGGTGAGAATGGTGTAAAACGGCGGGTTTCATTTTTTGACAGAAAACGACGGTGATTACATGAAAAATAACGAGct < 2:6879068/136‑1 (MQ=255) ctccAAAACCCGGCCAGATATTATAAAATCTTCGCAAAAGATTGCAATTCGGTACGCGACAAGCTCGTGAGCATGCGGGTAACCGGGGGTTTTCAATATTTCACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 1:3228198/137‑1 (MQ=255) aaCAGGGCTGAGATTATAAATTCGTCTACAAAGAATGTAAATCGGTACGCTACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGCTCTATAtt < 2:3698672/140‑1 (MQ=255) aaCAGGGCAGACATTATAAAAGCGACGACAAATAAGGGAAATCGGTACGCTACCAGCTCGTGAGCATGCGGGAAAACGGCGGTTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGCTCTATAtt < 2:5306111/140‑1 (MQ=255) ggCAGAGTTTATAAAATCGTCGACAAAGATTGGAAATCGGTACGCGACCAGCTGGTGAGCATGCGGGTAAACGGCGGGTTTCAATATTTGACCGTAAACGACGGTGATTACATGAAAAATAACGAGCTCTATATTAAGCa < 2:5370624/140‑1 (MQ=255) ggCACAGATTAAAAAATCGTCCAAAAAGAATGCAAATGGGTACGCGACCAGCTCGTTAGAATGGGGTTAAACGGCGGGTTTCAATATTTGACTGTAAACGACGGTGATTACATGAAAAATAACGAGCTCTATATTAAGCa < 1:5255639/140‑1 (MQ=255) | GCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGCTCTATATTAAGCATTGGTA > NZ_CP034943/986664‑986940 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |